RNA–Protein interactions for RNA: ENST00000398844.6

SEC24A-202, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SEC24A, Length 6,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-202ENST00000398844 CPA1P15085 419 aa10.84□□□□□ -0.67
SEC24A-202ENST00000398844 HSP90AB3PQ58FF7 597 aa10.84□□□□□ -0.67
SEC24A-202ENST00000398844 VPS53Q5VIR6 699 aa10.84□□□□□ -0.67
SEC24A-202ENST00000398844 FMNL2Q96PY5 1086 aa10.84□□□□□ -0.67
SEC24A-202ENST00000398844 MROH2AA6NES4 1674 aa10.83□□□□□ -0.68
SEC24A-202ENST00000398844 LRRC2Q9BYS8 371 aa10.83□□□□□ -0.68
SEC24A-202ENST00000398844 ZNF521Q96K83 1311 aa10.83□□□□□ -0.68
SEC24A-202ENST00000398844 CCDC39Q9UFE4 941 aa10.83□□□□□ -0.68
SEC24A-202ENST00000398844 KIF3AQ9Y496 699 aa10.83□□□□□ -0.68
SEC24A-202ENST00000398844 MAP3K5Q99683 1374 aa10.83□□□□□ -0.68
SEC24A-202ENST00000398844 BAG4O95429 457 aaKnown RBP10.83□□□□□ -0.68
SEC24A-202ENST00000398844 SLC4A8Q2Y0W8 1093 aa10.83□□□□□ -0.68
SEC24A-202ENST00000398844 ARHGAP45Q92619 1136 aa10.83□□□□□ -0.68
SEC24A-202ENST00000398844 INSRP06213 1382 aa10.83□□□□□ -0.68
SEC24A-202ENST00000398844 WDR33Q9C0J8 1336 aaKnown RBP10.83□□□□□ -0.68
SEC24A-202ENST00000398844 HIP1O00291 1037 aa10.83□□□□□ -0.68
SEC24A-202ENST00000398844 GJB2P29033 226 aa10.83□□□□□ -0.68
SEC24A-202ENST00000398844 BLOC1S2Q6QNY1 142 aa10.83□□□□□ -0.68
SEC24A-202ENST00000398844 CAMSAP1Q5T5Y3 1602 aa10.83□□□□□ -0.68
SEC24A-202ENST00000398844 USP19O94966 1318 aa10.83□□□□□ -0.68
SEC24A-202ENST00000398844 CCT2P78371 535 aaKnown RBP10.83□□□□□ -0.68
SEC24A-202ENST00000398844 KCNQ3O43525 872 aa10.82□□□□□ -0.68
SEC24A-202ENST00000398844 MCM2P49736 904 aa10.82□□□□□ -0.68
SEC24A-202ENST00000398844 TPD52L1Q16890 204 aaPredicted RBP10.82□□□□□ -0.68
SEC24A-202ENST00000398844 DBF4Q9UBU7 674 aaPredicted RBP10.82□□□□□ -0.68
SEC24A-202ENST00000398844 FLT4P35916 1363 aa10.82□□□□□ -0.68
SEC24A-202ENST00000398844 TTC21AQ8NDW8 1320 aa10.82□□□□□ -0.68
SEC24A-202ENST00000398844 ADAMTS2O95450 1211 aa10.82□□□□□ -0.68
SEC24A-202ENST00000398844 NFATC2IPQ8NCF5 419 aa10.82□□□□□ -0.68
SEC24A-202ENST00000398844 KLHDC4Q8TBB5 520 aa10.82□□□□□ -0.68
SEC24A-202ENST00000398844 RHPN1Q8TCX5 695 aa10.82□□□□□ -0.68
SEC24A-202ENST00000398844 TMX3Q96JJ7 454 aa10.82□□□□□ -0.68
SEC24A-202ENST00000398844 ORAI2Q96SN7 254 aa10.82□□□□□ -0.68
SEC24A-202ENST00000398844 SNRKQ9NRH2 765 aa10.82□□□□□ -0.68
SEC24A-202ENST00000398844 A0A087WZG4 1122 aa10.82□□□□□ -0.68
SEC24A-202ENST00000398844 ERICH2A1L162 156 aa10.82□□□□□ -0.68
SEC24A-202ENST00000398844 AMOTQ4VCS5 1084 aa10.82□□□□□ -0.68
SEC24A-202ENST00000398844 UBE3BQ7Z3V4 1068 aa10.82□□□□□ -0.68
SEC24A-202ENST00000398844 PNMA6EA0A0J9YXQ4 647 aa10.82□□□□□ -0.68
SEC24A-202ENST00000398844 XAGE3Q8WTP9 111 aa10.82□□□□□ -0.68
SEC24A-202ENST00000398844 CCDC144CPQ8IYA2 1237 aa10.81□□□□□ -0.68
SEC24A-202ENST00000398844 ESYT1Q9BSJ8 1104 aa10.81□□□□□ -0.68
SEC24A-202ENST00000398844 NDUFB9Q9Y6M9 179 aa10.81□□□□□ -0.68
SEC24A-202ENST00000398844 CCAR2Q8N163 923 aaKnown RBP10.81□□□□□ -0.68
SEC24A-202ENST00000398844 GOLIM4O00461 696 aa10.81□□□□□ -0.68
SEC24A-202ENST00000398844 ZSCAN23Q3MJ62 389 aa10.81□□□□□ -0.68
SEC24A-202ENST00000398844 TMOD3Q9NYL9 352 aa10.81□□□□□ -0.68
SEC24A-202ENST00000398844 ATP8B2P98198 1209 aa10.81□□□□□ -0.68
SEC24A-202ENST00000398844 SAMD1Q6SPF0 538 aaPredicted RBP10.81□□□□□ -0.68
SEC24A-202ENST00000398844 SMC5Q8IY18 1101 aa10.81□□□□□ -0.68
SEC24A-202ENST00000398844 TNMDQ9H2S6 317 aa10.81□□□□□ -0.68
SEC24A-202ENST00000398844 HYPKQ9NX55 129 aa10.81□□□□□ -0.68
SEC24A-202ENST00000398844 CNPY2Q9Y2B0 182 aa10.81□□□□□ -0.68
SEC24A-202ENST00000398844 CCDC73Q6ZRK6 1079 aa10.81□□□□□ -0.68
SEC24A-202ENST00000398844 SPATA32Q96LK8 384 aa10.81□□□□□ -0.68
SEC24A-202ENST00000398844 DCTPP1Q9H773 170 aa10.81□□□□□ -0.68
SEC24A-202ENST00000398844 IDH1O75874 414 aaKnown RBP10.8□□□□□ -0.68
SEC24A-202ENST00000398844 LARP1Q6PKG0 1096 aaKnown RBP10.8□□□□□ -0.68
SEC24A-202ENST00000398844 TRIM5Q9C035 493 aa10.8□□□□□ -0.68
SEC24A-202ENST00000398844 BICC1Q9H694 974 aaKnown RBP10.8□□□□□ -0.68
SEC24A-202ENST00000398844 NEO1Q92859 1461 aa10.8□□□□□ -0.68
SEC24A-202ENST00000398844 LRRFIP1Q32MZ4 808 aaKnown RBP10.8□□□□□ -0.68
SEC24A-202ENST00000398844 NUP133Q8WUM0 1156 aa10.8□□□□□ -0.68
SEC24A-202ENST00000398844 GLRX3O76003 335 aaKnown RBP10.8□□□□□ -0.68
SEC24A-202ENST00000398844 GSPT1P15170 499 aaKnown RBP10.8□□□□□ -0.68
SEC24A-202ENST00000398844 HAND2P61296 217 aa10.8□□□□□ -0.68
SEC24A-202ENST00000398844 COPS6Q7L5N1 327 aa10.8□□□□□ -0.68
SEC24A-202ENST00000398844 DDX46Q7L014 1031 aaKnown RBP10.8□□□□□ -0.68
SEC24A-202ENST00000398844 CIZ1Q9ULV3 898 aaPredicted RBP10.8□□□□□ -0.68
SEC24A-202ENST00000398844 DHX16O60231 1041 aaKnown RBP10.8□□□□□ -0.68
SEC24A-202ENST00000398844 SMC2O95347 1197 aa10.8□□□□□ -0.68
SEC24A-202ENST00000398844 HSPA2P54652 639 aa10.8□□□□□ -0.68
SEC24A-202ENST00000398844 CLTCQ00610 1675 aaKnown RBP10.79□□□□□ -0.68
SEC24A-202ENST00000398844 USP26Q9BXU7 913 aa10.79□□□□□ -0.68
SEC24A-202ENST00000398844 PDE4CQ08493 712 aa10.79□□□□□ -0.68
SEC24A-202ENST00000398844 METTL24Q5JXM2 366 aa10.79□□□□□ -0.68
SEC24A-202ENST00000398844 CHAMP1Q96JM3 812 aa10.79□□□□□ -0.68
SEC24A-202ENST00000398844 TFIP11Q9UBB9 837 aaKnown RBP10.79□□□□□ -0.68
SEC24A-202ENST00000398844 MBD3O95983 291 aa10.79□□□□□ -0.68
SEC24A-202ENST00000398844 ME1P48163 572 aa10.79□□□□□ -0.68
SEC24A-202ENST00000398844 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.79□□□□□ -0.68
SEC24A-202ENST00000398844 PDILTQ8N807 584 aa10.79□□□□□ -0.68
SEC24A-202ENST00000398844 TBC1D2BQ9UPU7 963 aa10.79□□□□□ -0.68
SEC24A-202ENST00000398844 NMIQ13287 307 aaPredicted RBP10.78□□□□□ -0.68
SEC24A-202ENST00000398844 AKAP4Q5JQC9 854 aa10.78□□□□□ -0.68
SEC24A-202ENST00000398844 NBPF6Q5VWK0 638 aa10.78□□□□□ -0.68
SEC24A-202ENST00000398844 CHST3Q7LGC8 479 aa10.78□□□□□ -0.68
SEC24A-202ENST00000398844 NBPF4Q96M43 638 aa10.78□□□□□ -0.68
SEC24A-202ENST00000398844 PUS7Q96PZ0 661 aaKnown RBP10.78□□□□□ -0.68
SEC24A-202ENST00000398844 ROBO2Q9HCK4 1378 aa10.78□□□□□ -0.68
SEC24A-202ENST00000398844 IFIT1P09914 478 aaKnown RBP10.78□□□□□ -0.68
SEC24A-202ENST00000398844 XRCC6P12956 609 aaKnown RBP eCLIP10.78□□□□□ -0.689e-8■■■■□ 21.9
SEC24A-202ENST00000398844 CKAP2LQ8IYA6 745 aa10.78□□□□□ -0.68
SEC24A-202ENST00000398844 ACSBG1Q96GR2 724 aa10.78□□□□□ -0.68
SEC24A-202ENST00000398844 ZNF830Q96NB3 372 aaPredicted RBP10.78□□□□□ -0.68
SEC24A-202ENST00000398844 CLASP1Q7Z460 1538 aa10.78□□□□□ -0.68
SEC24A-202ENST00000398844 RNMTO43148 476 aaKnown RBP10.78□□□□□ -0.68
SEC24A-202ENST00000398844 SDF4Q9BRK5 362 aa10.78□□□□□ -0.68
SEC24A-202ENST00000398844 MARCH6O60337 910 aa10.78□□□□□ -0.68
SEC24A-202ENST00000398844 VSIG10Q8N0Z9 540 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms