RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 TBC1D9Q6ZT07 1266 aa10.94□□□□□ -0.66
CDH23-203ENST00000398788 CCDC91Q7Z6B0 441 aa10.94□□□□□ -0.66
CDH23-203ENST00000398788 SPINK5Q9NQ38 1064 aaPredicted RBP10.94□□□□□ -0.66
CDH23-203ENST00000398788 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.94□□□□□ -0.66
CDH23-203ENST00000398788 RLBP1P12271 317 aa10.94□□□□□ -0.66
CDH23-203ENST00000398788 GPT2Q8TD30 523 aa10.94□□□□□ -0.66
CDH23-203ENST00000398788 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.94□□□□□ -0.66
CDH23-203ENST00000398788 BCCIPQ9P287 314 aaKnown RBP eCLIP10.94□□□□□ -0.66
CDH23-203ENST00000398788 PHF8Q9UPP1 1060 aa10.94□□□□□ -0.66
CDH23-203ENST00000398788 TTC37Q6PGP7 1564 aa10.93□□□□□ -0.66
CDH23-203ENST00000398788 SAFBQ15424 915 aaKnown RBP eCLIP10.93□□□□□ -0.66
CDH23-203ENST00000398788 SSH1Q8WYL5 1049 aa10.93□□□□□ -0.66
CDH23-203ENST00000398788 PYCARDQ9ULZ3 195 aa10.93□□□□□ -0.66
CDH23-203ENST00000398788 EMILIN1Q9Y6C2 1016 aa10.93□□□□□ -0.66
CDH23-203ENST00000398788 PLEKHH1Q9ULM0 1364 aa10.93□□□□□ -0.66
CDH23-203ENST00000398788 RARSP54136 660 aaKnown RBP10.93□□□□□ -0.66
CDH23-203ENST00000398788 NME9Q86XW9 330 aa10.93□□□□□ -0.66
CDH23-203ENST00000398788 UPF3BQ9BZI7 483 aaKnown RBP10.93□□□□□ -0.66
CDH23-203ENST00000398788 CD2BP2O95400 341 aaKnown RBP10.93□□□□□ -0.66
CDH23-203ENST00000398788 TPM1P09493 284 aa10.93□□□□□ -0.66
CDH23-203ENST00000398788 ZSCAN26Q16670 478 aa10.93□□□□□ -0.66
CDH23-203ENST00000398788 NKTRP30414 1462 aaKnown RBP10.93□□□□□ -0.66
CDH23-203ENST00000398788 F6X3S4 739 aa10.93□□□□□ -0.66
CDH23-203ENST00000398788 SMARCA5O60264 1052 aaPredicted RBP10.93□□□□□ -0.66
CDH23-203ENST00000398788 CASQ1P31415 396 aa10.93□□□□□ -0.66
CDH23-203ENST00000398788 NCBP1Q09161 790 aaKnown RBP10.93□□□□□ -0.66
CDH23-203ENST00000398788 WDR63Q8IWG1 891 aa10.93□□□□□ -0.66
CDH23-203ENST00000398788 KCNH5Q8NCM2 988 aa10.93□□□□□ -0.66
CDH23-203ENST00000398788 ANKRD20A12PQ8NF67 263 aa10.93□□□□□ -0.66
CDH23-203ENST00000398788 ST7Q9NRC1 585 aa10.93□□□□□ -0.66
CDH23-203ENST00000398788 FEZ2Q9UHY8 353 aaPredicted RBP10.93□□□□□ -0.66
CDH23-203ENST00000398788 TEX14Q8IWB6 1497 aa10.92□□□□□ -0.66
CDH23-203ENST00000398788 ICE2Q659A1 982 aa10.92□□□□□ -0.66
CDH23-203ENST00000398788 SYT10Q6XYQ8 523 aa10.92□□□□□ -0.66
CDH23-203ENST00000398788 GCC1Q96CN9 775 aa10.92□□□□□ -0.66
CDH23-203ENST00000398788 PRM3Q9NNZ6 103 aa10.92□□□□□ -0.66
CDH23-203ENST00000398788 CNNM1Q9NRU3 951 aa10.92□□□□□ -0.66
CDH23-203ENST00000398788 PTPN23Q9H3S7 1636 aa10.92□□□□□ -0.66
CDH23-203ENST00000398788 CABP4P57796 275 aa10.92□□□□□ -0.66
CDH23-203ENST00000398788 LRRCC1Q9C099 1032 aa10.92□□□□□ -0.66
CDH23-203ENST00000398788 SLFN14P0C7P3 912 aa10.92□□□□□ -0.66
CDH23-203ENST00000398788 FKBP4Q02790 459 aaKnown RBP eCLIP10.92□□□□□ -0.66
CDH23-203ENST00000398788 CWC27Q6UX04 472 aaKnown RBP10.92□□□□□ -0.66
CDH23-203ENST00000398788 DDX41Q9UJV9 622 aaKnown RBP10.92□□□□□ -0.66
CDH23-203ENST00000398788 SPG7Q9UQ90 795 aa10.92□□□□□ -0.66
CDH23-203ENST00000398788 WASLO00401 505 aaPredicted RBP10.91□□□□□ -0.66
CDH23-203ENST00000398788 TNRQ92752 1358 aa10.91□□□□□ -0.66
CDH23-203ENST00000398788 IPO7O95373 1038 aaKnown RBP10.91□□□□□ -0.66
CDH23-203ENST00000398788 GYS2P54840 703 aa10.91□□□□□ -0.66
CDH23-203ENST00000398788 NUTM1Q86Y26 1132 aa10.91□□□□□ -0.66
CDH23-203ENST00000398788 MICALL1Q8N3F8 863 aa10.91□□□□□ -0.66
CDH23-203ENST00000398788 CLIP2Q9UDT6 1046 aa10.91□□□□□ -0.66
CDH23-203ENST00000398788 CTNNA3Q9UI47 895 aa10.91□□□□□ -0.66
CDH23-203ENST00000398788 JRKLQ9Y4A0 524 aa10.91□□□□□ -0.66
CDH23-203ENST00000398788 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.91□□□□□ -0.66
CDH23-203ENST00000398788 NSD3Q9BZ95 1437 aa10.91□□□□□ -0.66
CDH23-203ENST00000398788 USP8P40818 1118 aa10.9□□□□□ -0.66
CDH23-203ENST00000398788 C14orf93Q9H972 538 aaKnown RBP10.9□□□□□ -0.66
CDH23-203ENST00000398788 ZNF215Q9UL58 517 aaPredicted RBP10.9□□□□□ -0.66
CDH23-203ENST00000398788 PDILTQ8N807 584 aa10.9□□□□□ -0.66
CDH23-203ENST00000398788 TCEAL9Q9UHQ7 104 aa10.9□□□□□ -0.66
CDH23-203ENST00000398788 CDC42BPAQ5VT25 1732 aa10.9□□□□□ -0.66
CDH23-203ENST00000398788 SLU7O95391 586 aaKnown RBP10.9□□□□□ -0.66
CDH23-203ENST00000398788 CAPN2P17655 700 aa10.9□□□□□ -0.66
CDH23-203ENST00000398788 ARHGAP29Q52LW3 1261 aa10.9□□□□□ -0.66
CDH23-203ENST00000398788 AACSQ86V21 672 aa10.9□□□□□ -0.66
CDH23-203ENST00000398788 CCDC102AQ96A19 550 aa10.9□□□□□ -0.66
CDH23-203ENST00000398788 CENPHQ9H3R5 247 aa10.9□□□□□ -0.66
CDH23-203ENST00000398788 TRIM66O15016 1216 aa10.9□□□□□ -0.67
CDH23-203ENST00000398788 FCHSD2O94868 740 aa10.9□□□□□ -0.67
CDH23-203ENST00000398788 PSMA5P28066 241 aa10.9□□□□□ -0.67
CDH23-203ENST00000398788 IKQ13123 557 aaPredicted RBP10.9□□□□□ -0.67
CDH23-203ENST00000398788 CADPS2Q86UW7 1296 aa10.9□□□□□ -0.67
CDH23-203ENST00000398788 CKAP2LQ8IYA6 745 aa10.9□□□□□ -0.67
CDH23-203ENST00000398788 CTDP1Q9Y5B0 961 aaPredicted RBP10.9□□□□□ -0.67
CDH23-203ENST00000398788 MYO1CO00159 1063 aa10.89□□□□□ -0.67
CDH23-203ENST00000398788 MAP2K2P36507 400 aa10.89□□□□□ -0.67
CDH23-203ENST00000398788 NFE2L2Q16236 605 aa10.89□□□□□ -0.67
CDH23-203ENST00000398788 FERMT3Q86UX7 667 aa10.89□□□□□ -0.67
CDH23-203ENST00000398788 TBC1D2BQ9UPU7 963 aa10.89□□□□□ -0.67
CDH23-203ENST00000398788 WDR33Q9C0J8 1336 aaKnown RBP10.89□□□□□ -0.67
CDH23-203ENST00000398788 URI1O94763 535 aaPredicted RBP10.89□□□□□ -0.67
CDH23-203ENST00000398788 SF3B2Q13435 895 aaKnown RBP10.89□□□□□ -0.67
CDH23-203ENST00000398788 USP48Q86UV5 1035 aa10.89□□□□□ -0.67
CDH23-203ENST00000398788 NSFL1CQ9UNZ2 370 aaKnown RBP10.89□□□□□ -0.67
CDH23-203ENST00000398788 BTBD11A6QL63 1104 aa10.89□□□□□ -0.67
CDH23-203ENST00000398788 BRPF1P55201 1214 aaPredicted RBP10.89□□□□□ -0.67
CDH23-203ENST00000398788 SRRTQ9BXP5 876 aaKnown RBP10.89□□□□□ -0.67
CDH23-203ENST00000398788 ITSN2Q9NZM3 1697 aa10.89□□□□□ -0.67
CDH23-203ENST00000398788 CCT4P50991 539 aaKnown RBP10.88□□□□□ -0.67
CDH23-203ENST00000398788 ADAMTS2O95450 1211 aa10.88□□□□□ -0.67
CDH23-203ENST00000398788 ATP2B2Q01814 1243 aa10.88□□□□□ -0.67
CDH23-203ENST00000398788 LRMPQ12912 555 aa10.88□□□□□ -0.67
CDH23-203ENST00000398788 FAM212AQ96EL1 285 aa10.88□□□□□ -0.67
CDH23-203ENST00000398788 LARP6Q9BRS8 491 aaKnown RBP10.88□□□□□ -0.67
CDH23-203ENST00000398788 TNMDQ9H2S6 317 aa10.88□□□□□ -0.67
CDH23-203ENST00000398788 PPP1R1BQ9UD71 204 aaPredicted RBP10.88□□□□□ -0.67
CDH23-203ENST00000398788 IBTKQ9P2D0 1353 aaPredicted RBP10.88□□□□□ -0.67
CDH23-203ENST00000398788 PPP2R5AQ15172 486 aa10.88□□□□□ -0.67
CDH23-203ENST00000398788 BICDL1Q6ZP65 573 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms