RNA–Protein interactions for RNA: ENST00000398610.2

PCDHGA10-201, Transcript of protocadherin gamma subfamily A, 10, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA10, Length 4,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA10-201ENST00000398610 CALRP27797 417 aaKnown RBP12.6□□□□□ -0.39
PCDHGA10-201ENST00000398610 HSP90AB2PQ58FF8 381 aa12.6□□□□□ -0.39
PCDHGA10-201ENST00000398610 PHACTR3Q96KR7 559 aa12.6□□□□□ -0.39
PCDHGA10-201ENST00000398610 PLEKHF1Q96S99 279 aa12.6□□□□□ -0.39
PCDHGA10-201ENST00000398610 PIK3C2BO00750 1634 aa12.59□□□□□ -0.39
PCDHGA10-201ENST00000398610 NAP1L1P55209 391 aaKnown RBP12.59□□□□□ -0.39
PCDHGA10-201ENST00000398610 CCDC70Q6NSX1 233 aa12.59□□□□□ -0.39
PCDHGA10-201ENST00000398610 CCDC73Q6ZRK6 1079 aa12.59□□□□□ -0.39
PCDHGA10-201ENST00000398610 KRT28Q7Z3Y7 464 aa12.59□□□□□ -0.39
PCDHGA10-201ENST00000398610 ZFYVE9O95405 1425 aa12.59□□□□□ -0.39
PCDHGA10-201ENST00000398610 CCT4P50991 539 aaKnown RBP12.59□□□□□ -0.39
PCDHGA10-201ENST00000398610 GPS2Q13227 327 aa12.59□□□□□ -0.39
PCDHGA10-201ENST00000398610 NUP133Q8WUM0 1156 aa12.59□□□□□ -0.39
PCDHGA10-201ENST00000398610 ATP5J2-PTCD1G3V325 749 aa12.59□□□□□ -0.39
PCDHGA10-201ENST00000398610 OFD1O75665 1012 aa12.59□□□□□ -0.39
PCDHGA10-201ENST00000398610 UPF3BQ9BZI7 483 aaKnown RBP12.59□□□□□ -0.39
PCDHGA10-201ENST00000398610 PIP4K2AP48426 406 aaPredicted RBP12.58□□□□□ -0.39
PCDHGA10-201ENST00000398610 MTERF4Q7Z6M4 381 aaKnown RBP12.58□□□□□ -0.39
PCDHGA10-201ENST00000398610 TNRQ92752 1358 aa12.58□□□□□ -0.39
PCDHGA10-201ENST00000398610 KCNH5Q8NCM2 988 aa12.58□□□□□ -0.4
PCDHGA10-201ENST00000398610 TMOD3Q9NYL9 352 aa12.58□□□□□ -0.4
PCDHGA10-201ENST00000398610 HOMER1Q86YM7 354 aa12.58□□□□□ -0.4
PCDHGA10-201ENST00000398610 NASPP49321 788 aaPredicted RBP12.58□□□□□ -0.4
PCDHGA10-201ENST00000398610 RAI14Q9P0K7 980 aa12.58□□□□□ -0.4
PCDHGA10-201ENST00000398610 IL16Q14005 1332 aa12.57□□□□□ -0.4
PCDHGA10-201ENST00000398610 TRAK2O60296 914 aa12.57□□□□□ -0.4
PCDHGA10-201ENST00000398610 MYD88Q99836 296 aa12.57□□□□□ -0.4
PCDHGA10-201ENST00000398610 BOLA2Q9H3K6 86 aa12.57□□□□□ -0.4
PCDHGA10-201ENST00000398610 LRP2BPQ9P2M1 347 aa12.57□□□□□ -0.4
PCDHGA10-201ENST00000398610 ZC3H13Q5T200 1668 aaKnown RBP12.57□□□□□ -0.4
PCDHGA10-201ENST00000398610 SIGLEC1Q9BZZ2 1709 aa12.57□□□□□ -0.4
PCDHGA10-201ENST00000398610 ZMYM3Q14202 1370 aa12.57□□□□□ -0.4
PCDHGA10-201ENST00000398610 TMEM132AQ24JP5 1023 aa12.57□□□□□ -0.4
PCDHGA10-201ENST00000398610 SART3Q15020 963 aaKnown RBP12.56□□□□□ -0.4
PCDHGA10-201ENST00000398610 CCDC8Q9H0W5 538 aaPredicted RBP12.56□□□□□ -0.4
PCDHGA10-201ENST00000398610 ACEP12821 1306 aa12.56□□□□□ -0.4
PCDHGA10-201ENST00000398610 PRPF40AO75400 957 aaKnown RBP12.56□□□□□ -0.4
PCDHGA10-201ENST00000398610 STARD3NLO95772 234 aa12.56□□□□□ -0.4
PCDHGA10-201ENST00000398610 CCDC82Q8N4S0 544 aa12.56□□□□□ -0.4
PCDHGA10-201ENST00000398610 PTPRMP28827 1452 aa12.56□□□□□ -0.4
PCDHGA10-201ENST00000398610 PPFIA3O75145 1194 aa12.56□□□□□ -0.4
PCDHGA10-201ENST00000398610 CAVIN1Q6NZI2 390 aaKnown RBP12.56□□□□□ -0.4
PCDHGA10-201ENST00000398610 CHD1LQ86WJ1 897 aa12.56□□□□□ -0.4
PCDHGA10-201ENST00000398610 SASS6Q6UVJ0 657 aa12.55□□□□□ -0.4
PCDHGA10-201ENST00000398610 GCC1Q96CN9 775 aa12.55□□□□□ -0.4
PCDHGA10-201ENST00000398610 ARHGEF28Q8N1W1 1705 aaKnown RBP12.55□□□□□ -0.4
PCDHGA10-201ENST00000398610 METTL24Q5JXM2 366 aa12.55□□□□□ -0.4
PCDHGA10-201ENST00000398610 LARP6Q9BRS8 491 aaKnown RBP12.55□□□□□ -0.4
PCDHGA10-201ENST00000398610 ALKQ9UM73 1620 aa12.55□□□□□ -0.4
PCDHGA10-201ENST00000398610 PSMA5P28066 241 aa12.55□□□□□ -0.4
PCDHGA10-201ENST00000398610 IQSEC2Q5JU85 1478 aa12.55□□□□□ -0.4
PCDHGA10-201ENST00000398610 METP08581 1390 aa12.55□□□□□ -0.4
PCDHGA10-201ENST00000398610 TSHZ3Q63HK5 1081 aa12.55□□□□□ -0.4
PCDHGA10-201ENST00000398610 SLC39A6Q13433 755 aa12.54□□□□□ -0.4
PCDHGA10-201ENST00000398610 ALDH1L2Q3SY69 923 aa12.54□□□□□ -0.4
PCDHGA10-201ENST00000398610 TSPYL6Q8N831 410 aa12.54□□□□□ -0.4
PCDHGA10-201ENST00000398610 MBIPQ9NS73 344 aa12.54□□□□□ -0.4
PCDHGA10-201ENST00000398610 GNL3LQ9NVN8 582 aaKnown RBP12.54□□□□□ -0.4
PCDHGA10-201ENST00000398610 SNRKQ9NRH2 765 aa12.54□□□□□ -0.4
PCDHGA10-201ENST00000398610 EXOC5O00471 708 aa12.54□□□□□ -0.4
PCDHGA10-201ENST00000398610 TDO2P48775 406 aa12.54□□□□□ -0.4
PCDHGA10-201ENST00000398610 TEX35Q5T0J7 233 aa12.54□□□□□ -0.4
PCDHGA10-201ENST00000398610 UBAP1LF5GYI3 381 aa12.54□□□□□ -0.4
PCDHGA10-201ENST00000398610 TTLL5Q6EMB2 1281 aa12.54□□□□□ -0.4
PCDHGA10-201ENST00000398610 FERMT3Q86UX7 667 aa12.54□□□□□ -0.4
PCDHGA10-201ENST00000398610 ERC1Q8IUD2 1116 aa12.54□□□□□ -0.4
PCDHGA10-201ENST00000398610 DDX11Q96FC9 970 aa12.54□□□□□ -0.4
PCDHGA10-201ENST00000398610 ACSBG1Q96GR2 724 aa12.54□□□□□ -0.4
PCDHGA10-201ENST00000398610 CCDC39Q9UFE4 941 aa12.53□□□□□ -0.4
PCDHGA10-201ENST00000398610 A0A087WZG4 1122 aa12.53□□□□□ -0.4
PCDHGA10-201ENST00000398610 BRPF1P55201 1214 aaPredicted RBP12.53□□□□□ -0.4
PCDHGA10-201ENST00000398610 AEBP1Q8IUX7 1158 aa12.53□□□□□ -0.4
PCDHGA10-201ENST00000398610 IFT57Q9NWB7 429 aa12.53□□□□□ -0.4
PCDHGA10-201ENST00000398610 TRMT112Q9UI30 125 aaKnown RBP12.53□□□□□ -0.4
PCDHGA10-201ENST00000398610 PREX1Q8TCU6 1659 aa12.53□□□□□ -0.4
PCDHGA10-201ENST00000398610 SETQ01105 290 aaPredicted RBP12.53□□□□□ -0.4
PCDHGA10-201ENST00000398610 A2ML1A8K2U0 1454 aa12.52□□□□□ -0.4
PCDHGA10-201ENST00000398610 JAKMIP1Q96N16 626 aaKnown RBP12.52□□□□□ -0.41
PCDHGA10-201ENST00000398610 ZHX3Q9H4I2 956 aa12.52□□□□□ -0.41
PCDHGA10-201ENST00000398610 MINDY4BA8MYZ0 360 aa12.52□□□□□ -0.41
PCDHGA10-201ENST00000398610 LRRFIP2Q9Y608 721 aaKnown RBP12.52□□□□□ -0.41
PCDHGA10-201ENST00000398610 IBSPP21815 317 aaPredicted RBP12.52□□□□□ -0.41
PCDHGA10-201ENST00000398610 IL13P35225 146 aa12.52□□□□□ -0.41
PCDHGA10-201ENST00000398610 SLC4A8Q2Y0W8 1093 aa12.52□□□□□ -0.41
PCDHGA10-201ENST00000398610 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.52□□□□□ -0.41
PCDHGA10-201ENST00000398610 CYP46A1Q9Y6A2 500 aa12.52□□□□□ -0.41
PCDHGA10-201ENST00000398610 ZPR1O75312 459 aa12.51□□□□□ -0.41
PCDHGA10-201ENST00000398610 RICTORQ6R327 1708 aa12.51□□□□□ -0.41
PCDHGA10-201ENST00000398610 IGHMBP2P38935 993 aaKnown RBP12.51□□□□□ -0.41
PCDHGA10-201ENST00000398610 EDC4Q6P2E9 1401 aaKnown RBP12.51□□□□□ -0.41
PCDHGA10-201ENST00000398610 PI4KAP2A4QPH2 592 aa12.51□□□□□ -0.41
PCDHGA10-201ENST00000398610 XBP1P17861 261 aa12.51□□□□□ -0.41
PCDHGA10-201ENST00000398610 HDAC1Q13547 482 aaPredicted RBP12.51□□□□□ -0.41
PCDHGA10-201ENST00000398610 BLOC1S2Q6QNY1 142 aa12.51□□□□□ -0.41
PCDHGA10-201ENST00000398610 UBE3BQ7Z3V4 1068 aa12.51□□□□□ -0.41
PCDHGA10-201ENST00000398610 PI4KAP1Q8N8J0 262 aa12.51□□□□□ -0.41
PCDHGA10-201ENST00000398610 LRRC59Q96AG4 307 aaKnown RBP12.51□□□□□ -0.41
PCDHGA10-201ENST00000398610 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.51□□□□□ -0.41
PCDHGA10-201ENST00000398610 MBD3O95983 291 aa12.5□□□□□ -0.41
PCDHGA10-201ENST00000398610 STK38Q15208 465 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms