RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 KCNQ2O43526 872 aa35.06■■■■□ 3.2
CPNE1-203ENST00000397442 BRWD3Q6RI45 1802 aa35.06■■■■□ 3.2
CPNE1-203ENST00000397442 API5Q9BZZ5 524 aaKnown RBP35.05■■■■□ 3.2
CPNE1-203ENST00000397442 RGS17Q9UGC6 210 aaPredicted RBP35.05■■■■□ 3.2
CPNE1-203ENST00000397442 ABCC4O15439 1325 aa35.05■■■■□ 3.2
CPNE1-203ENST00000397442 FAM182BQ5T319 152 aa35.05■■■■□ 3.2
CPNE1-203ENST00000397442 DBF4Q9UBU7 674 aaPredicted RBP35.05■■■■□ 3.2
CPNE1-203ENST00000397442 FLIIQ13045 1269 aa35.04■■■■□ 3.2
CPNE1-203ENST00000397442 PPP4R2Q9NY27 417 aa35.04■■■■□ 3.2
CPNE1-203ENST00000397442 PDIA6Q15084 440 aa35.03■■■■□ 3.2
CPNE1-203ENST00000397442 PROSER3Q2NL68 480 aa35.02■■■■□ 3.2
CPNE1-203ENST00000397442 PHAXQ9H814 394 aaKnown RBP35.02■■■■□ 3.2
CPNE1-203ENST00000397442 ANXA1P04083 346 aa35.01■■■■□ 3.2
CPNE1-203ENST00000397442 MVPQ14764 893 aaKnown RBP35.01■■■■□ 3.2
CPNE1-203ENST00000397442 TMEM57Q8N5G2 664 aa35.01■■■■□ 3.2
CPNE1-203ENST00000397442 NHSQ6T4R5 1651 aa35.01■■■■□ 3.19
CPNE1-203ENST00000397442 VSIG10Q8N0Z9 540 aa35.01■■■■□ 3.19
CPNE1-203ENST00000397442 DDX21Q9NR30 783 aaKnown RBP eCLIP35■■■■□ 3.19
CPNE1-203ENST00000397442 SBF2Q86WG5 1849 aa35■■■■□ 3.19
CPNE1-203ENST00000397442 SLC4A9Q96Q91 983 aa34.99■■■■□ 3.19
CPNE1-203ENST00000397442 RBM42Q9BTD8 480 aaKnown RBP34.98■■■■□ 3.19
CPNE1-203ENST00000397442 PTF1AQ7RTS3 328 aa34.97■■■■□ 3.19
CPNE1-203ENST00000397442 FKBP5Q13451 457 aaPredicted RBP34.95■■■■□ 3.19
CPNE1-203ENST00000397442 LRP10Q7Z4F1 713 aa34.95■■■■□ 3.19
CPNE1-203ENST00000397442 HYPKQ9NX55 129 aa34.95■■■■□ 3.19
CPNE1-203ENST00000397442 KRT27Q7Z3Y8 459 aa34.95■■■■□ 3.18
CPNE1-203ENST00000397442 TJP1Q07157 1748 aa34.94■■■■□ 3.18
CPNE1-203ENST00000397442 ITPRIPQ8IWB1 547 aa34.94■■■■□ 3.18
CPNE1-203ENST00000397442 BTAF1O14981 1849 aa34.93■■■■□ 3.18
CPNE1-203ENST00000397442 RXRBP28702 533 aa34.93■■■■□ 3.18
CPNE1-203ENST00000397442 DNAJC10Q8IXB1 793 aa34.93■■■■□ 3.18
CPNE1-203ENST00000397442 ERBB4Q15303 1308 aa34.92■■■■□ 3.18
CPNE1-203ENST00000397442 F6X3S4 739 aa34.92■■■■□ 3.18
CPNE1-203ENST00000397442 TEX13AQ9BXU3 409 aaPredicted RBP34.92■■■■□ 3.18
CPNE1-203ENST00000397442 PALLDQ8WX93 1383 aa34.92■■■■□ 3.18
CPNE1-203ENST00000397442 INTS3Q68E01 1043 aaKnown RBP34.92■■■■□ 3.18
CPNE1-203ENST00000397442 POTEAQ6S8J7 498 aa34.92■■■■□ 3.18
CPNE1-203ENST00000397442 NBPF26B4DH59 902 aa34.91■■■■□ 3.18
CPNE1-203ENST00000397442 NBPF14Q5TI25 921 aa34.91■■■■□ 3.18
CPNE1-203ENST00000397442 NBPF10Q6P3W6 841 aaKnown RBP34.91■■■■□ 3.18
CPNE1-203ENST00000397442 NBPF15Q8N660 670 aa34.91■■■■□ 3.18
CPNE1-203ENST00000397442 DDX19BQ9UMR2 479 aa34.91■■■■□ 3.18
CPNE1-203ENST00000397442 CICQ96RK0 1608 aaPredicted RBP34.9■■■■□ 3.18
CPNE1-203ENST00000397442 PIP4K2AP48426 406 aaPredicted RBP34.9■■■■□ 3.18
CPNE1-203ENST00000397442 SMARCC1Q92922 1105 aaPredicted RBP34.9■■■■□ 3.18
CPNE1-203ENST00000397442 MYL6BP14649 208 aa34.89■■■■□ 3.18
CPNE1-203ENST00000397442 B4GALNT3Q6L9W6 998 aa34.89■■■■□ 3.18
CPNE1-203ENST00000397442 A1BGP04217 495 aa34.88■■■■□ 3.17
CPNE1-203ENST00000397442 N4BP2Q86UW6 1770 aaPredicted RBP34.87■■■■□ 3.17
CPNE1-203ENST00000397442 ADCY9O60503 1353 aa34.87■■■■□ 3.17
CPNE1-203ENST00000397442 LOC102724428A0A0B4J2F2 783 aa34.86■■■■□ 3.17
CPNE1-203ENST00000397442 SIK1P57059 783 aa34.86■■■■□ 3.17
CPNE1-203ENST00000397442 ZNF831Q5JPB2 1677 aa34.86■■■■□ 3.17
CPNE1-203ENST00000397442 AAMPQ13685 434 aa34.86■■■■□ 3.17
CPNE1-203ENST00000397442 FAM196AQ6ZSG2 479 aa34.86■■■■□ 3.17
CPNE1-203ENST00000397442 PXDNLA1KZ92 1463 aa34.85■■■■□ 3.17
CPNE1-203ENST00000397442 CYP19A1P11511 503 aaPredicted RBP34.85■■■■□ 3.17
CPNE1-203ENST00000397442 PI4KAP2A4QPH2 592 aa34.84■■■■□ 3.17
CPNE1-203ENST00000397442 ZBTB7BO15156 539 aaPredicted RBP34.84■■■■□ 3.17
CPNE1-203ENST00000397442 STARD3NLO95772 234 aa34.84■■■■□ 3.17
CPNE1-203ENST00000397442 PI4KAP1Q8N8J0 262 aa34.84■■■■□ 3.17
CPNE1-203ENST00000397442 SLC4A10Q6U841 1118 aa34.83■■■■□ 3.17
CPNE1-203ENST00000397442 XAGE3Q8WTP9 111 aa34.83■■■■□ 3.17
CPNE1-203ENST00000397442 CCDC136Q96JN2 1154 aa34.83■■■■□ 3.17
CPNE1-203ENST00000397442 COPS6Q7L5N1 327 aa34.82■■■■□ 3.17
CPNE1-203ENST00000397442 ZBTB40Q9NUA8 1239 aa34.82■■■■□ 3.17
CPNE1-203ENST00000397442 ATP6V1AP38606 617 aa34.81■■■■□ 3.16
CPNE1-203ENST00000397442 CCT4P50991 539 aaKnown RBP34.81■■■■□ 3.16
CPNE1-203ENST00000397442 AIMP1Q12904 312 aaKnown RBP34.81■■■■□ 3.16
CPNE1-203ENST00000397442 KSR2Q6VAB6 950 aa34.81■■■■□ 3.16
CPNE1-203ENST00000397442 BCL11BQ9C0K0 894 aaPredicted RBP34.81■■■■□ 3.16
CPNE1-203ENST00000397442 ITPK1Q13572 414 aa34.8■■■■□ 3.16
CPNE1-203ENST00000397442 DNAAF4Q8WXU2 420 aa34.8■■■■□ 3.16
CPNE1-203ENST00000397442 EP400Q96L91 3159 aa34.8■■■■□ 3.16
CPNE1-203ENST00000397442 MAP3K2Q9Y2U5 619 aa34.78■■■■□ 3.16
CPNE1-203ENST00000397442 COL5A3P25940 1745 aaPredicted RBP34.78■■■■□ 3.16
CPNE1-203ENST00000397442 DDX58O95786 925 aaKnown RBP34.77■■■■□ 3.16
CPNE1-203ENST00000397442 LY75O60449 1722 aa34.77■■■■□ 3.16
CPNE1-203ENST00000397442 RREB1Q92766 1687 aa34.76■■■■□ 3.15
CPNE1-203ENST00000397442 PCDHB15Q9Y5E8 787 aa34.76■■■■□ 3.15
CPNE1-203ENST00000397442 ATP10DQ9P241 1426 aa34.75■■■■□ 3.15
CPNE1-203ENST00000397442 BEND3Q5T5X7 828 aa34.75■■■■□ 3.15
CPNE1-203ENST00000397442 CHMP4BQ9H444 224 aaKnown RBP34.74■■■■□ 3.15
CPNE1-203ENST00000397442 ANKRD13DQ6ZTN6 518 aa34.73■■■■□ 3.15
CPNE1-203ENST00000397442 ZBTB1Q9Y2K1 713 aa34.73■■■■□ 3.15
CPNE1-203ENST00000397442 MYH14Q7Z406 1995 aaKnown RBP34.72■■■■□ 3.15
CPNE1-203ENST00000397442 ARFGEF2Q9Y6D5 1785 aa34.72■■■■□ 3.15
CPNE1-203ENST00000397442 INTS5Q6P9B9 1019 aaKnown RBP34.72■■■■□ 3.15
CPNE1-203ENST00000397442 TTLL7Q6ZT98 887 aa34.72■■■■□ 3.15
CPNE1-203ENST00000397442 TRIM37O94972 964 aa34.71■■■■□ 3.15
CPNE1-203ENST00000397442 RIC3Q7Z5B4 369 aa34.71■■■■□ 3.15
CPNE1-203ENST00000397442 NUP188Q5SRE5 1749 aa34.71■■■■□ 3.15
CPNE1-203ENST00000397442 CRKLP46109 303 aaKnown RBP34.7■■■■□ 3.15
CPNE1-203ENST00000397442 ILDR1Q86SU0 546 aaPredicted RBP34.7■■■■□ 3.15
CPNE1-203ENST00000397442 MEIS3Q99687 375 aa34.7■■■■□ 3.15
CPNE1-203ENST00000397442 SRCIN1Q9C0H9 1055 aa34.7■■■■□ 3.15
CPNE1-203ENST00000397442 PLBD2Q8NHP8 589 aa34.7■■■■□ 3.14
CPNE1-203ENST00000397442 KCNQ4P56696 695 aa34.69■■■■□ 3.14
CPNE1-203ENST00000397442 CCDC87Q9NVE4 849 aa34.69■■■■□ 3.14
CPNE1-203ENST00000397442 LINC00116Q8NCU8 138 aa34.68■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms