RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 ARHGAP27Q6ZUM4 889 aa17.32■□□□□ 0.36
SEC13-209ENST00000397117 RRP7AQ9Y3A4 280 aaKnown RBP17.32■□□□□ 0.36
SEC13-209ENST00000397117 ARFGEF1Q9Y6D6 1849 aa17.32■□□□□ 0.36
SEC13-209ENST00000397117 KDM6AO15550 1401 aaPredicted RBP17.32■□□□□ 0.36
SEC13-209ENST00000397117 TOMM70O94826 608 aa17.32■□□□□ 0.36
SEC13-209ENST00000397117 KCNA3P22001 575 aa17.32■□□□□ 0.36
SEC13-209ENST00000397117 RFC4P35249 363 aa17.32■□□□□ 0.36
SEC13-209ENST00000397117 APLP1P51693 650 aa17.32■□□□□ 0.36
SEC13-209ENST00000397117 DNAJC5GQ8N7S2 189 aa17.31■□□□□ 0.36
SEC13-209ENST00000397117 PARP3Q9Y6F1 533 aa17.31■□□□□ 0.36
SEC13-209ENST00000397117 TMPOP42166 694 aaKnown RBP17.3■□□□□ 0.36
SEC13-209ENST00000397117 NCBP3Q53F19 620 aaKnown RBP17.3■□□□□ 0.36
SEC13-209ENST00000397117 PHACTR3Q96KR7 559 aa17.3■□□□□ 0.36
SEC13-209ENST00000397117 CABP4P57796 275 aa17.29■□□□□ 0.36
SEC13-209ENST00000397117 AMOTQ4VCS5 1084 aa17.29■□□□□ 0.36
SEC13-209ENST00000397117 ZNF530Q6P9A1 599 aaPredicted RBP17.29■□□□□ 0.36
SEC13-209ENST00000397117 RIPK4P57078 832 aa17.29■□□□□ 0.36
SEC13-209ENST00000397117 NFE2L2Q16236 605 aa17.29■□□□□ 0.36
SEC13-209ENST00000397117 NMRK2Q9NPI5 230 aa17.29■□□□□ 0.36
SEC13-209ENST00000397117 CCDC27Q2M243 656 aa17.28■□□□□ 0.36
SEC13-209ENST00000397117 CRKLP46109 303 aaKnown RBP17.27■□□□□ 0.36
SEC13-209ENST00000397117 WWC1Q8IX03 1113 aa17.27■□□□□ 0.36
SEC13-209ENST00000397117 PTCD1O75127 700 aaKnown RBP17.26■□□□□ 0.35
SEC13-209ENST00000397117 GOLGA2Q08379 1002 aa17.26■□□□□ 0.35
SEC13-209ENST00000397117 C9orf131Q5VYM1 1079 aa17.26■□□□□ 0.35
SEC13-209ENST00000397117 NFATC2IPQ8NCF5 419 aa17.26■□□□□ 0.35
SEC13-209ENST00000397117 PIM2Q9P1W9 311 aa17.26■□□□□ 0.35
SEC13-209ENST00000397117 SRP68Q9UHB9 627 aaKnown RBP17.26■□□□□ 0.35
SEC13-209ENST00000397117 SBF1O95248 1867 aa17.26■□□□□ 0.35
SEC13-209ENST00000397117 ZNF521Q96K83 1311 aa17.26■□□□□ 0.35
SEC13-209ENST00000397117 TJP1Q07157 1748 aa17.26■□□□□ 0.35
SEC13-209ENST00000397117 FKBP8Q14318 412 aa17.25■□□□□ 0.35
SEC13-209ENST00000397117 ADAMTS7Q9UKP4 1686 aa17.25■□□□□ 0.35
SEC13-209ENST00000397117 SCN11AQ9UI33 1791 aa17.25■□□□□ 0.35
SEC13-209ENST00000397117 DDR1Q08345 913 aa17.25■□□□□ 0.35
SEC13-209ENST00000397117 LMOD3Q0VAK6 560 aa17.25■□□□□ 0.35
SEC13-209ENST00000397117 RBM46Q8TBY0 533 aaKnown RBP17.25■□□□□ 0.35
SEC13-209ENST00000397117 USP42Q9H9J4 1324 aaKnown RBP17.24■□□□□ 0.35
SEC13-209ENST00000397117 INTS5Q6P9B9 1019 aaKnown RBP17.24■□□□□ 0.35
SEC13-209ENST00000397117 GAS2L2Q8NHY3 880 aa17.24■□□□□ 0.35
SEC13-209ENST00000397117 TM4SF1P30408 202 aa17.23■□□□□ 0.35
SEC13-209ENST00000397117 DALRD3Q5D0E6 543 aaKnown RBP17.23■□□□□ 0.35
SEC13-209ENST00000397117 C1orf141Q5JVX7 400 aa17.23■□□□□ 0.35
SEC13-209ENST00000397117 WDR63Q8IWG1 891 aa17.23■□□□□ 0.35
SEC13-209ENST00000397117 WDR90Q96KV7 1748 aa17.22■□□□□ 0.35
SEC13-209ENST00000397117 CDCA7LQ96GN5 454 aa17.22■□□□□ 0.35
SEC13-209ENST00000397117 TRIM35Q9UPQ4 493 aa17.22■□□□□ 0.35
SEC13-209ENST00000397117 E9PSI1 815 aa17.21■□□□□ 0.35
SEC13-209ENST00000397117 MTHFSDQ2M296 383 aaKnown RBP17.21■□□□□ 0.35
SEC13-209ENST00000397117 POLRMTO00411 1230 aaKnown RBP17.21■□□□□ 0.35
SEC13-209ENST00000397117 CHRNA5P30532 468 aa17.21■□□□□ 0.35
SEC13-209ENST00000397117 CALD1Q05682 793 aaKnown RBP17.2■□□□□ 0.34
SEC13-209ENST00000397117 KCPQ6ZWJ8 1503 aa17.19■□□□□ 0.34
SEC13-209ENST00000397117 SLFN5Q08AF3 891 aa17.19■□□□□ 0.34
SEC13-209ENST00000397117 FSTL1Q12841 308 aa17.19■□□□□ 0.34
SEC13-209ENST00000397117 RTF1Q92541 710 aaKnown RBP17.19■□□□□ 0.34
SEC13-209ENST00000397117 RNF181Q9P0P0 153 aa17.19■□□□□ 0.34
SEC13-209ENST00000397117 AFDNP55196 1824 aaKnown RBP17.19■□□□□ 0.34
SEC13-209ENST00000397117 VIRMAQ69YN4 1812 aaKnown RBP17.19■□□□□ 0.34
SEC13-209ENST00000397117 KDM2BQ8NHM5 1336 aa17.18■□□□□ 0.34
SEC13-209ENST00000397117 DNAJC10Q8IXB1 793 aa17.18■□□□□ 0.34
SEC13-209ENST00000397117 C16orf71Q8IYS4 520 aaPredicted RBP17.18■□□□□ 0.34
SEC13-209ENST00000397117 AKAP4Q5JQC9 854 aa17.18■□□□□ 0.34
SEC13-209ENST00000397117 RRAGCQ9HB90 399 aa17.18■□□□□ 0.34
SEC13-209ENST00000397117 SOS1Q07889 1333 aaPredicted RBP17.17■□□□□ 0.34
SEC13-209ENST00000397117 IL16Q14005 1332 aa17.17■□□□□ 0.34
SEC13-209ENST00000397117 USPL1Q5W0Q7 1092 aa17.17■□□□□ 0.34
SEC13-209ENST00000397117 MYH16Q9H6N6 1097 aa17.17■□□□□ 0.34
SEC13-209ENST00000397117 SLC52A2Q9HAB3 445 aa17.17■□□□□ 0.34
SEC13-209ENST00000397117 LGR6Q9HBX8 967 aa17.17■□□□□ 0.34
SEC13-209ENST00000397117 TNRC6CQ9HCJ0 1690 aaKnown RBP17.16■□□□□ 0.34
SEC13-209ENST00000397117 NRXN2Q9P2S2 1712 aa17.16■□□□□ 0.34
SEC13-209ENST00000397117 GNAT3A8MTJ3 354 aa17.16■□□□□ 0.34
SEC13-209ENST00000397117 ZPR1O75312 459 aa17.16■□□□□ 0.34
SEC13-209ENST00000397117 CYP19A1P11511 503 aaPredicted RBP17.16■□□□□ 0.34
SEC13-209ENST00000397117 HTRA3P83110 453 aa17.16■□□□□ 0.34
SEC13-209ENST00000397117 JMYQ8N9B5 988 aa17.16■□□□□ 0.34
SEC13-209ENST00000397117 KLRG1Q96E93 195 aa17.16■□□□□ 0.34
SEC13-209ENST00000397117 SPINK5Q9NQ38 1064 aaPredicted RBP17.16■□□□□ 0.34
SEC13-209ENST00000397117 HTATSF1O43719 755 aaKnown RBP17.15■□□□□ 0.34
SEC13-209ENST00000397117 DUSP27Q5VZP5 1158 aa17.15■□□□□ 0.34
SEC13-209ENST00000397117 NFIXQ14938 502 aa17.14■□□□□ 0.33
SEC13-209ENST00000397117 TRMT2AQ8IZ69 625 aaKnown RBP17.14■□□□□ 0.33
SEC13-209ENST00000397117 THUMPD2Q9BTF0 503 aaKnown RBP17.14■□□□□ 0.33
SEC13-209ENST00000397117 NARFQ9UHQ1 456 aa17.14■□□□□ 0.33
SEC13-209ENST00000397117 CCDC88AQ3V6T2 1871 aa17.14■□□□□ 0.33
SEC13-209ENST00000397117 DLEC1Q9Y238 1755 aa17.14■□□□□ 0.33
SEC13-209ENST00000397117 RNMTO43148 476 aaKnown RBP17.14■□□□□ 0.33
SEC13-209ENST00000397117 DCTN1Q14203 1278 aa17.14■□□□□ 0.33
SEC13-209ENST00000397117 MCM10Q7L590 875 aa17.14■□□□□ 0.33
SEC13-209ENST00000397117 MRC1P22897 1456 aa17.13■□□□□ 0.33
SEC13-209ENST00000397117 DLG5Q8TDM6 1919 aa17.13■□□□□ 0.33
SEC13-209ENST00000397117 SLC39A6Q13433 755 aa17.13■□□□□ 0.33
SEC13-209ENST00000397117 BCL2L12Q9HB09 334 aa17.13■□□□□ 0.33
SEC13-209ENST00000397117 LAS1LQ9Y4W2 734 aaKnown RBP17.13■□□□□ 0.33
SEC13-209ENST00000397117 PRELPP51888 382 aa17.12■□□□□ 0.33
SEC13-209ENST00000397117 ZC3H4Q9UPT8 1303 aaKnown RBP17.12■□□□□ 0.33
SEC13-209ENST00000397117 GNAI1P63096 354 aa17.11■□□□□ 0.33
SEC13-209ENST00000397117 RASSF7Q02833 373 aa17.11■□□□□ 0.33
SEC13-209ENST00000397117 IFT57Q9NWB7 429 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms