RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 NFATC2IPQ8NCF5 419 aa11.66□□□□□ -0.54
SCFD1-202ENST00000396629 PCNTO95613 3336 aa11.65□□□□□ -0.54
SCFD1-202ENST00000396629 POTECB2RU33 542 aa11.65□□□□□ -0.54
SCFD1-202ENST00000396629 ZPR1O75312 459 aa11.65□□□□□ -0.54
SCFD1-202ENST00000396629 USPL1Q5W0Q7 1092 aa11.65□□□□□ -0.54
SCFD1-202ENST00000396629 VIRMAQ69YN4 1812 aaKnown RBP11.65□□□□□ -0.54
SCFD1-202ENST00000396629 SOS1Q07889 1333 aaPredicted RBP11.64□□□□□ -0.55
SCFD1-202ENST00000396629 KCNA4P22459 653 aa11.64□□□□□ -0.55
SCFD1-202ENST00000396629 NFIXQ14938 502 aa11.64□□□□□ -0.55
SCFD1-202ENST00000396629 C1orf141Q5JVX7 400 aa11.64□□□□□ -0.55
SCFD1-202ENST00000396629 TTLL6Q8N841 843 aa11.64□□□□□ -0.55
SCFD1-202ENST00000396629 FER1L6Q2WGJ9 1857 aa11.63□□□□□ -0.55
SCFD1-202ENST00000396629 NFKBIEO00221 500 aa11.63□□□□□ -0.55
SCFD1-202ENST00000396629 TNNT2P45379 298 aaPredicted RBP11.63□□□□□ -0.55
SCFD1-202ENST00000396629 DNAJC10Q8IXB1 793 aa11.63□□□□□ -0.55
SCFD1-202ENST00000396629 NARFQ9UHQ1 456 aa11.63□□□□□ -0.55
SCFD1-202ENST00000396629 ANKRD31Q8N7Z5 1873 aa11.62□□□□□ -0.55
SCFD1-202ENST00000396629 SERPINB2P05120 415 aa11.62□□□□□ -0.55
SCFD1-202ENST00000396629 CYP19A1P11511 503 aaPredicted RBP11.62□□□□□ -0.55
SCFD1-202ENST00000396629 AEBP1Q8IUX7 1158 aa11.62□□□□□ -0.55
SCFD1-202ENST00000396629 BCL2L12Q9HB09 334 aa11.62□□□□□ -0.55
SCFD1-202ENST00000396629 DPY19L2Q6NUT2 758 aa11.61□□□□□ -0.55
SCFD1-202ENST00000396629 C2CD5Q86YS7 1000 aa11.61□□□□□ -0.55
SCFD1-202ENST00000396629 CREBZFQ9NS37 354 aa11.61□□□□□ -0.55
SCFD1-202ENST00000396629 COL15A1P39059 1388 aa11.61□□□□□ -0.55
SCFD1-202ENST00000396629 MRC1P22897 1456 aa11.6□□□□□ -0.55
SCFD1-202ENST00000396629 H0YIN7 160 aa11.6□□□□□ -0.55
SCFD1-202ENST00000396629 SLC52A2Q9HAB3 445 aa11.6□□□□□ -0.55
SCFD1-202ENST00000396629 CARMIL3Q8ND23 1372 aa11.6□□□□□ -0.55
SCFD1-202ENST00000396629 CHADLQ6NUI6 762 aa11.59□□□□□ -0.55
SCFD1-202ENST00000396629 COL11A2P13942 1736 aaPredicted RBP11.59□□□□□ -0.55
SCFD1-202ENST00000396629 UBR2Q8IWV8 1755 aa11.59□□□□□ -0.55
SCFD1-202ENST00000396629 AKAP4Q5JQC9 854 aa11.59□□□□□ -0.55
SCFD1-202ENST00000396629 SULT6B1Q6IMI4 303 aa11.59□□□□□ -0.55
SCFD1-202ENST00000396629 PRDM10Q9NQV6 1147 aa11.59□□□□□ -0.55
SCFD1-202ENST00000396629 ZBTB1Q9Y2K1 713 aa11.59□□□□□ -0.55
SCFD1-202ENST00000396629 LGR6Q9HBX8 967 aa11.58□□□□□ -0.56
SCFD1-202ENST00000396629 MKRN1Q9UHC7 482 aaKnown RBP11.58□□□□□ -0.56
SCFD1-202ENST00000396629 PDZRN3Q9UPQ7 1066 aa11.58□□□□□ -0.56
SCFD1-202ENST00000396629 ARFGEF2Q9Y6D5 1785 aa11.57□□□□□ -0.56
SCFD1-202ENST00000396629 FOXN1O15353 648 aa11.57□□□□□ -0.56
SCFD1-202ENST00000396629 LTBP3Q9NS15 1303 aa11.57□□□□□ -0.56
SCFD1-202ENST00000396629 SCN4AP35499 1836 aa11.57□□□□□ -0.56
SCFD1-202ENST00000396629 CACNA1SQ13698 1873 aa11.57□□□□□ -0.56
SCFD1-202ENST00000396629 RNMTO43148 476 aaKnown RBP11.57□□□□□ -0.56
SCFD1-202ENST00000396629 SLC39A6Q13433 755 aa11.57□□□□□ -0.56
SCFD1-202ENST00000396629 ERFEQ4G0M1 354 aa11.57□□□□□ -0.56
SCFD1-202ENST00000396629 VSIG10Q8N0Z9 540 aa11.57□□□□□ -0.56
SCFD1-202ENST00000396629 CNTNAP1P78357 1384 aa11.57□□□□□ -0.56
SCFD1-202ENST00000396629 IL13P35225 146 aa11.56□□□□□ -0.56
SCFD1-202ENST00000396629 SCN7AQ01118 1682 aa11.56□□□□□ -0.56
SCFD1-202ENST00000396629 SLX4Q8IY92 1834 aa11.56□□□□□ -0.56
SCFD1-202ENST00000396629 PASKQ96RG2 1323 aa11.55□□□□□ -0.56
SCFD1-202ENST00000396629 C21orf2O43822 256 aa11.55□□□□□ -0.56
SCFD1-202ENST00000396629 POTEIP0CG38 1075 aa11.55□□□□□ -0.56
SCFD1-202ENST00000396629 POTEJP0CG39 1038 aa11.55□□□□□ -0.56
SCFD1-202ENST00000396629 ZNF622Q969S3 477 aaKnown RBP eCLIP11.55□□□□□ -0.563e-6■□□□□ 8.1
SCFD1-202ENST00000396629 BRIP1Q9BX63 1249 aa11.55□□□□□ -0.56
SCFD1-202ENST00000396629 PDE6BP35913 854 aa11.55□□□□□ -0.56
SCFD1-202ENST00000396629 EIF5P55010 431 aaKnown RBP11.55□□□□□ -0.56
SCFD1-202ENST00000396629 PANK3Q9H999 370 aa11.55□□□□□ -0.56
SCFD1-202ENST00000396629 A0A087WZG4 1122 aa11.54□□□□□ -0.56
SCFD1-202ENST00000396629 DDNO94850 711 aaPredicted RBP11.54□□□□□ -0.56
SCFD1-202ENST00000396629 SLC34A2O95436 690 aa11.54□□□□□ -0.56
SCFD1-202ENST00000396629 CTCFP49711 727 aaPredicted RBP11.54□□□□□ -0.56
SCFD1-202ENST00000396629 BICDL1Q6ZP65 573 aa11.54□□□□□ -0.56
SCFD1-202ENST00000396629 CANXP27824 592 aaKnown RBP11.53□□□□□ -0.56
SCFD1-202ENST00000396629 TBC1D9BQ66K14 1250 aa11.53□□□□□ -0.56
SCFD1-202ENST00000396629 MORC1Q86VD1 984 aa11.53□□□□□ -0.56
SCFD1-202ENST00000396629 POLR3GLQ9BT43 218 aa11.53□□□□□ -0.56
SCFD1-202ENST00000396629 ZNF219Q9P2Y4 722 aaPredicted RBP11.53□□□□□ -0.56
SCFD1-202ENST00000396629 PRR5LQ6MZQ0 368 aa11.53□□□□□ -0.56
SCFD1-202ENST00000396629 LDHDQ86WU2 507 aa11.53□□□□□ -0.56
SCFD1-202ENST00000396629 TAOK3Q9H2K8 898 aa11.53□□□□□ -0.56
SCFD1-202ENST00000396629 ADAMTSL1Q8N6G6 1762 aa11.52□□□□□ -0.56
SCFD1-202ENST00000396629 VEGFBP49765 207 aa11.52□□□□□ -0.56
SCFD1-202ENST00000396629 L3MBTL3Q96JM7 780 aaPredicted RBP11.52□□□□□ -0.56
SCFD1-202ENST00000396629 IQCA1LA6NCM1 817 aa11.52□□□□□ -0.57
SCFD1-202ENST00000396629 STARD3NLO95772 234 aa11.52□□□□□ -0.57
SCFD1-202ENST00000396629 STYK1Q6J9G0 422 aa11.52□□□□□ -0.57
SCFD1-202ENST00000396629 CNKSR1Q969H4 720 aa11.52□□□□□ -0.57
SCFD1-202ENST00000396629 AIDAQ96BJ3 306 aa11.52□□□□□ -0.57
SCFD1-202ENST00000396629 TAF1DQ9H5J8 278 aaPredicted RBP11.52□□□□□ -0.57
SCFD1-202ENST00000396629 WBP1LQ9NX94 342 aa11.52□□□□□ -0.57
SCFD1-202ENST00000396629 SIPA1L3O60292 1781 aaPredicted RBP11.51□□□□□ -0.57
SCFD1-202ENST00000396629 BCORQ6W2J9 1755 aa11.51□□□□□ -0.57
SCFD1-202ENST00000396629 TMEM88BA6NKF7 163 aa11.51□□□□□ -0.57
SCFD1-202ENST00000396629 ITGBL1O95965 494 aaPredicted RBP11.51□□□□□ -0.57
SCFD1-202ENST00000396629 SOGA3Q5TF21 947 aa11.51□□□□□ -0.57
SCFD1-202ENST00000396629 CCDC24Q8N4L8 307 aa11.5□□□□□ -0.57
SCFD1-202ENST00000396629 TIMELESSQ9UNS1 1208 aa11.5□□□□□ -0.57
SCFD1-202ENST00000396629 SRGNP10124 158 aa11.5□□□□□ -0.57
SCFD1-202ENST00000396629 MTHFSDQ2M296 383 aaKnown RBP11.5□□□□□ -0.57
SCFD1-202ENST00000396629 PRPF40BQ6NWY9 871 aaKnown RBP11.5□□□□□ -0.57
SCFD1-202ENST00000396629 PPP4R3CPQ6ZMV5 832 aa11.5□□□□□ -0.57
SCFD1-202ENST00000396629 LBX1P52954 281 aa11.49□□□□□ -0.57
SCFD1-202ENST00000396629 C7orf43Q8WVR3 580 aa11.49□□□□□ -0.57
SCFD1-202ENST00000396629 MASTLQ96GX5 879 aa11.49□□□□□ -0.57
SCFD1-202ENST00000396629 TEX13AQ9BXU3 409 aaPredicted RBP11.49□□□□□ -0.57
SCFD1-202ENST00000396629 TBC1D2BQ9UPU7 963 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms