RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 HSPA4P34932 840 aa19.08■□□□□ 0.64
HOXA3-202ENST00000396352 KDM3BQ7LBC6 1761 aa19.07■□□□□ 0.64
HOXA3-202ENST00000396352 MSNP26038 577 aaKnown RBP19.07■□□□□ 0.64
HOXA3-202ENST00000396352 NUTM2GQ5VZR2 741 aa19.07■□□□□ 0.64
HOXA3-202ENST00000396352 NUTM1Q86Y26 1132 aa19.07■□□□□ 0.64
HOXA3-202ENST00000396352 HDGFL1Q5TGJ6 251 aa19.07■□□□□ 0.64
HOXA3-202ENST00000396352 PI4K2BQ8TCG2 481 aa19.07■□□□□ 0.64
HOXA3-202ENST00000396352 NOL7Q9UMY1 257 aaKnown RBP19.07■□□□□ 0.64
HOXA3-202ENST00000396352 OFD1O75665 1012 aa19.06■□□□□ 0.64
HOXA3-202ENST00000396352 PPP1R42Q7Z4L9 355 aa19.06■□□□□ 0.64
HOXA3-202ENST00000396352 CEMIPQ8WUJ3 1361 aa19.06■□□□□ 0.64
HOXA3-202ENST00000396352 RAB11FIP3O75154 756 aa19.05■□□□□ 0.64
HOXA3-202ENST00000396352 TCHHQ07283 1943 aa19.05■□□□□ 0.64
HOXA3-202ENST00000396352 TPM2P07951 284 aa19.05■□□□□ 0.64
HOXA3-202ENST00000396352 PLEKHG5O94827 1062 aa19.04■□□□□ 0.64
HOXA3-202ENST00000396352 KIAA1211Q6ZU35 1233 aa19.04■□□□□ 0.64
HOXA3-202ENST00000396352 LTV1Q96GA3 475 aaPredicted RBP19.04■□□□□ 0.64
HOXA3-202ENST00000396352 RHPN1Q8TCX5 695 aa19.04■□□□□ 0.64
HOXA3-202ENST00000396352 RAD50Q92878 1312 aa19.03■□□□□ 0.64
HOXA3-202ENST00000396352 RRP9O43818 475 aaKnown RBP19.03■□□□□ 0.64
HOXA3-202ENST00000396352 SURF6O75683 361 aaKnown RBP19.03■□□□□ 0.64
HOXA3-202ENST00000396352 MAP4K4O95819 1239 aaPredicted RBP19.03■□□□□ 0.64
HOXA3-202ENST00000396352 USHBP1Q8N6Y0 703 aa19.03■□□□□ 0.64
HOXA3-202ENST00000396352 RPAP1Q9BWH6 1393 aaPredicted RBP19.03■□□□□ 0.64
HOXA3-202ENST00000396352 SGSM2O43147 1006 aa19.03■□□□□ 0.64
HOXA3-202ENST00000396352 ZNF500O60304 480 aaPredicted RBP19.02■□□□□ 0.64
HOXA3-202ENST00000396352 NBPF7P0C2Y1 421 aaPredicted RBP19.02■□□□□ 0.64
HOXA3-202ENST00000396352 ABTB2Q8N961 1025 aa19.01■□□□□ 0.63
HOXA3-202ENST00000396352 HSP90AA2PQ14568 343 aaPredicted RBP19.01■□□□□ 0.63
HOXA3-202ENST00000396352 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.01■□□□□ 0.63
HOXA3-202ENST00000396352 LSG1Q9H089 658 aaKnown RBP19.01■□□□□ 0.63
HOXA3-202ENST00000396352 SRGAP3O43295 1099 aa19.01■□□□□ 0.63
HOXA3-202ENST00000396352 GADD45BO75293 160 aaPredicted RBP19.01■□□□□ 0.63
HOXA3-202ENST00000396352 TTC14Q96N46 770 aa19.01■□□□□ 0.63
HOXA3-202ENST00000396352 SNX14Q9Y5W7 946 aa19.01■□□□□ 0.63
HOXA3-202ENST00000396352 WDR33Q9C0J8 1336 aaKnown RBP19■□□□□ 0.63
HOXA3-202ENST00000396352 LMO7Q8WWI1 1683 aa19■□□□□ 0.63
HOXA3-202ENST00000396352 EIF4A1P60842 406 aaKnown RBP19■□□□□ 0.63
HOXA3-202ENST00000396352 BEND3Q5T5X7 828 aa19■□□□□ 0.63
HOXA3-202ENST00000396352 KIF1BPQ96EK5 621 aa19■□□□□ 0.63
HOXA3-202ENST00000396352 RGPD2P0DJD1 1756 aa19■□□□□ 0.63
HOXA3-202ENST00000396352 GDPD2Q9HCC8 539 aa19■□□□□ 0.63
HOXA3-202ENST00000396352 NFAT5O94916 1531 aa19■□□□□ 0.63
HOXA3-202ENST00000396352 ZKSCAN5Q9Y2L8 839 aa18.99■□□□□ 0.63
HOXA3-202ENST00000396352 RNF214Q8ND24 703 aa18.99■□□□□ 0.63
HOXA3-202ENST00000396352 CHPF2Q9P2E5 772 aa18.99■□□□□ 0.63
HOXA3-202ENST00000396352 FOXD4L6Q3SYB3 417 aaPredicted RBP18.99■□□□□ 0.63
HOXA3-202ENST00000396352 FOXD4L3Q6VB84 417 aaPredicted RBP18.99■□□□□ 0.63
HOXA3-202ENST00000396352 USP48Q86UV5 1035 aa18.99■□□□□ 0.63
HOXA3-202ENST00000396352 TSPY26PQ9H489 355 aa18.99■□□□□ 0.63
HOXA3-202ENST00000396352 USP42Q9H9J4 1324 aaKnown RBP18.99■□□□□ 0.63
HOXA3-202ENST00000396352 EIF2S2P20042 333 aaKnown RBP18.98■□□□□ 0.63
HOXA3-202ENST00000396352 KCNA6P17658 529 aa18.98■□□□□ 0.63
HOXA3-202ENST00000396352 RASEFQ8IZ41 740 aa18.98■□□□□ 0.63
HOXA3-202ENST00000396352 LGR6Q9HBX8 967 aa18.98■□□□□ 0.63
HOXA3-202ENST00000396352 HOXB7P09629 217 aa18.98■□□□□ 0.63
HOXA3-202ENST00000396352 TMEM87AQ8NBN3 555 aa18.98■□□□□ 0.63
HOXA3-202ENST00000396352 SYAP1Q96A49 352 aaPredicted RBP18.98■□□□□ 0.63
HOXA3-202ENST00000396352 ADCY9O60503 1353 aa18.97■□□□□ 0.63
HOXA3-202ENST00000396352 CNTROBQ8N137 903 aa18.97■□□□□ 0.63
HOXA3-202ENST00000396352 DNAAF4Q8WXU2 420 aa18.97■□□□□ 0.63
HOXA3-202ENST00000396352 PI4KAP2A4QPH2 592 aa18.97■□□□□ 0.63
HOXA3-202ENST00000396352 PI4KAP1Q8N8J0 262 aa18.97■□□□□ 0.63
HOXA3-202ENST00000396352 TERF1P54274 439 aa18.96■□□□□ 0.63
HOXA3-202ENST00000396352 AK2P54819 239 aa18.96■□□□□ 0.63
HOXA3-202ENST00000396352 FER1L4A9Z1Z3 1794 aa18.96■□□□□ 0.63
HOXA3-202ENST00000396352 RUFY3Q7L099 469 aa18.96■□□□□ 0.63
HOXA3-202ENST00000396352 CCDC39Q9UFE4 941 aa18.96■□□□□ 0.63
HOXA3-202ENST00000396352 SETD1BQ9UPS6 1966 aaKnown RBP18.96■□□□□ 0.63
HOXA3-202ENST00000396352 KCNQ3O43525 872 aa18.96■□□□□ 0.63
HOXA3-202ENST00000396352 MCM5P33992 734 aa18.96■□□□□ 0.63
HOXA3-202ENST00000396352 XPCQ01831 940 aaPredicted RBP18.96■□□□□ 0.63
HOXA3-202ENST00000396352 NBPF6Q5VWK0 638 aa18.96■□□□□ 0.63
HOXA3-202ENST00000396352 NBPF4Q96M43 638 aa18.96■□□□□ 0.63
HOXA3-202ENST00000396352 IP6K1Q92551 441 aa18.95■□□□□ 0.62
HOXA3-202ENST00000396352 PHRF1Q9P1Y6 1649 aaKnown RBP18.95■□□□□ 0.62
HOXA3-202ENST00000396352 CWC27Q6UX04 472 aaKnown RBP18.94■□□□□ 0.62
HOXA3-202ENST00000396352 TTC41PQ6P2S7 1318 aa18.94■□□□□ 0.62
HOXA3-202ENST00000396352 SPG7Q9UQ90 795 aa18.94■□□□□ 0.62
HOXA3-202ENST00000396352 PHF14O94880 888 aa18.93■□□□□ 0.62
HOXA3-202ENST00000396352 ZSCAN22P10073 491 aaPredicted RBP18.93■□□□□ 0.62
HOXA3-202ENST00000396352 MTX1Q13505 466 aa18.93■□□□□ 0.62
HOXA3-202ENST00000396352 THEMISQ8N1K5 641 aaPredicted RBP18.93■□□□□ 0.62
HOXA3-202ENST00000396352 LIMCH1Q9UPQ0 1083 aa18.93■□□□□ 0.62
HOXA3-202ENST00000396352 ANXA1P04083 346 aa18.93■□□□□ 0.62
HOXA3-202ENST00000396352 HSP90AB4PQ58FF6 505 aa18.93■□□□□ 0.62
HOXA3-202ENST00000396352 CNPY2Q9Y2B0 182 aa18.93■□□□□ 0.62
HOXA3-202ENST00000396352 LARP6Q9BRS8 491 aaKnown RBP18.92■□□□□ 0.62
HOXA3-202ENST00000396352 GLRX3O76003 335 aaKnown RBP18.92■□□□□ 0.62
HOXA3-202ENST00000396352 SYT1P21579 422 aa18.92■□□□□ 0.62
HOXA3-202ENST00000396352 LARGE1O95461 756 aa18.91■□□□□ 0.62
HOXA3-202ENST00000396352 C14orf37Q86TY3 774 aa18.91■□□□□ 0.62
HOXA3-202ENST00000396352 STX6O43752 255 aa18.91■□□□□ 0.62
HOXA3-202ENST00000396352 CPA1P15085 419 aa18.91■□□□□ 0.62
HOXA3-202ENST00000396352 PLPPR3Q6T4P5 718 aa18.91■□□□□ 0.62
HOXA3-202ENST00000396352 R3HCC1Q9Y3T6 440 aaKnown RBP18.91■□□□□ 0.62
HOXA3-202ENST00000396352 HYPKQ9NX55 129 aa18.91■□□□□ 0.62
HOXA3-202ENST00000396352 CASTP20810 708 aaKnown RBP18.9■□□□□ 0.62
HOXA3-202ENST00000396352 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.9■□□□□ 0.62
HOXA3-202ENST00000396352 PTH1RQ03431 593 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms