RNA–Protein interactions for RNA: ENST00000396193.5

PDE1C-206, Transcript of phosphodiesterase 1C, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PDE1C, Length 5,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-206ENST00000396193 FAM69CQ0P6D2 419 aa20.75■□□□□ 0.91
PDE1C-206ENST00000396193 TATP17735 454 aaPredicted RBP20.75■□□□□ 0.91
PDE1C-206ENST00000396193 GUCY1B3Q02153 619 aa20.75■□□□□ 0.91
PDE1C-206ENST00000396193 OSCARQ8IYS5 282 aa20.75■□□□□ 0.91
PDE1C-206ENST00000396193 TAF7Q15545 349 aaPredicted RBP20.74■□□□□ 0.91
PDE1C-206ENST00000396193 C8orf76Q96K31 380 aa20.74■□□□□ 0.91
PDE1C-206ENST00000396193 TTC12Q9H892 705 aaPredicted RBP20.74■□□□□ 0.91
PDE1C-206ENST00000396193 KIF6Q6ZMV9 814 aa20.74■□□□□ 0.91
PDE1C-206ENST00000396193 USP48Q86UV5 1035 aa20.74■□□□□ 0.91
PDE1C-206ENST00000396193 WASF1Q92558 559 aa20.74■□□□□ 0.91
PDE1C-206ENST00000396193 IQGAP2Q13576 1575 aa20.74■□□□□ 0.91
PDE1C-206ENST00000396193 LMAN1P49257 510 aa20.74■□□□□ 0.91
PDE1C-206ENST00000396193 NME9Q86XW9 330 aa20.74■□□□□ 0.91
PDE1C-206ENST00000396193 CCDC171Q6TFL3 1326 aa20.73■□□□□ 0.91
PDE1C-206ENST00000396193 IFT140Q96RY7 1462 aa20.73■□□□□ 0.91
PDE1C-206ENST00000396193 HMGB1P09429 215 aaKnown RBP20.73■□□□□ 0.91
PDE1C-206ENST00000396193 ESCO1Q5FWF5 840 aa20.73■□□□□ 0.91
PDE1C-206ENST00000396193 KIAA1328Q86T90 577 aa20.73■□□□□ 0.91
PDE1C-206ENST00000396193 FLIIQ13045 1269 aa20.73■□□□□ 0.91
PDE1C-206ENST00000396193 TMC6Q7Z403 805 aa20.73■□□□□ 0.91
PDE1C-206ENST00000396193 CCDC8Q9H0W5 538 aaPredicted RBP20.72■□□□□ 0.91
PDE1C-206ENST00000396193 ECHDC1Q9NTX5 307 aa20.72■□□□□ 0.91
PDE1C-206ENST00000396193 MCM3P25205 808 aa20.72■□□□□ 0.91
PDE1C-206ENST00000396193 RNF123Q5XPI4 1314 aa20.72■□□□□ 0.91
PDE1C-206ENST00000396193 EIF5P55010 431 aaKnown RBP20.72■□□□□ 0.91
PDE1C-206ENST00000396193 CCDC186Q7Z3E2 898 aa20.72■□□□□ 0.91
PDE1C-206ENST00000396193 RBM33Q96EV2 1170 aaKnown RBP20.72■□□□□ 0.91
PDE1C-206ENST00000396193 CNPY2Q9Y2B0 182 aa20.71■□□□□ 0.91
PDE1C-206ENST00000396193 SNAPC4Q5SXM2 1469 aa20.71■□□□□ 0.91
PDE1C-206ENST00000396193 FAM177BA6PVY3 158 aa20.71■□□□□ 0.91
PDE1C-206ENST00000396193 FAM200AQ8TCP9 573 aa20.71■□□□□ 0.91
PDE1C-206ENST00000396193 ANAPC15P60006 121 aa20.71■□□□□ 0.91
PDE1C-206ENST00000396193 GPATCH11Q8N954 259 aa20.71■□□□□ 0.91
PDE1C-206ENST00000396193 TANGO6Q9C0B7 1094 aa20.71■□□□□ 0.91
PDE1C-206ENST00000396193 EVI5LQ96CN4 794 aa20.71■□□□□ 0.91
PDE1C-206ENST00000396193 POTEB2H3BUK9 544 aa20.7■□□□□ 0.9
PDE1C-206ENST00000396193 ZFYVE27Q5T4F4 411 aa20.7■□□□□ 0.9
PDE1C-206ENST00000396193 RBM25P49756 843 aaKnown RBP20.7■□□□□ 0.9
PDE1C-206ENST00000396193 WAPLQ7Z5K2 1190 aa20.7■□□□□ 0.9
PDE1C-206ENST00000396193 DNAAF4Q8WXU2 420 aa20.7■□□□□ 0.9
PDE1C-206ENST00000396193 UBAC1Q9BSL1 405 aa20.7■□□□□ 0.9
PDE1C-206ENST00000396193 CEP131Q9UPN4 1083 aa20.7■□□□□ 0.9
PDE1C-206ENST00000396193 PDE1AP54750 535 aa20.7■□□□□ 0.9
PDE1C-206ENST00000396193 SMARCC1Q92922 1105 aaPredicted RBP20.7■□□□□ 0.9
PDE1C-206ENST00000396193 KRT18P05783 430 aaKnown RBP20.69■□□□□ 0.9
PDE1C-206ENST00000396193 ANKRD44Q8N8A2 993 aa20.69■□□□□ 0.9
PDE1C-206ENST00000396193 PRM3Q9NNZ6 103 aa20.69■□□□□ 0.9
PDE1C-206ENST00000396193 ASXL1Q8IXJ9 1541 aa20.69■□□□□ 0.9
PDE1C-206ENST00000396193 BIN1O00499 593 aa20.69■□□□□ 0.9
PDE1C-206ENST00000396193 CABP4P57796 275 aa20.69■□□□□ 0.9
PDE1C-206ENST00000396193 KLHL10Q6JEL2 608 aa20.69■□□□□ 0.9
PDE1C-206ENST00000396193 FEZ1Q99689 392 aa20.69■□□□□ 0.9
PDE1C-206ENST00000396193 ESYT1Q9BSJ8 1104 aa20.68■□□□□ 0.9
PDE1C-206ENST00000396193 KDM2BQ8NHM5 1336 aa20.68■□□□□ 0.9
PDE1C-206ENST00000396193 PLB1Q6P1J6 1458 aa20.68■□□□□ 0.9
PDE1C-206ENST00000396193 GOLGA6L9A6NEM1 432 aa20.68■□□□□ 0.9
PDE1C-206ENST00000396193 IPO4Q8TEX9 1081 aaKnown RBP20.68■□□□□ 0.9
PDE1C-206ENST00000396193 MEIS3Q99687 375 aa20.68■□□□□ 0.9
PDE1C-206ENST00000396193 TDO2P48775 406 aa20.67■□□□□ 0.9
PDE1C-206ENST00000396193 ATF3P18847 181 aa20.67■□□□□ 0.9
PDE1C-206ENST00000396193 GNL3LQ9NVN8 582 aaKnown RBP20.67■□□□□ 0.9
PDE1C-206ENST00000396193 FAM83GA6ND36 823 aa20.67■□□□□ 0.9
PDE1C-206ENST00000396193 KIF20AO95235 890 aa20.67■□□□□ 0.9
PDE1C-206ENST00000396193 CCT2P78371 535 aaKnown RBP20.67■□□□□ 0.9
PDE1C-206ENST00000396193 LARP1Q6PKG0 1096 aaKnown RBP20.67■□□□□ 0.9
PDE1C-206ENST00000396193 TERF1P54274 439 aa20.67■□□□□ 0.9
PDE1C-206ENST00000396193 IGSF3O75054 1194 aa20.66■□□□□ 0.9
PDE1C-206ENST00000396193 CUL7Q14999 1698 aa20.66■□□□□ 0.9
PDE1C-206ENST00000396193 MRC2Q9UBG0 1479 aa20.66■□□□□ 0.9
PDE1C-206ENST00000396193 SKILP12757 684 aa20.66■□□□□ 0.9
PDE1C-206ENST00000396193 CCDC150Q8NCX0 1101 aa20.66■□□□□ 0.9
PDE1C-206ENST00000396193 IDH1O75874 414 aaKnown RBP20.66■□□□□ 0.9
PDE1C-206ENST00000396193 ZRSR2Q15696 482 aaKnown RBP20.66■□□□□ 0.9
PDE1C-206ENST00000396193 ANO6Q4KMQ2 910 aa20.66■□□□□ 0.9
PDE1C-206ENST00000396193 TAX1BP1Q86VP1 789 aa20.66■□□□□ 0.9
PDE1C-206ENST00000396193 DHX37Q8IY37 1157 aaKnown RBP20.66■□□□□ 0.9
PDE1C-206ENST00000396193 CTDP1Q9Y5B0 961 aaPredicted RBP20.66■□□□□ 0.9
PDE1C-206ENST00000396193 PPP1R42Q7Z4L9 355 aa20.66■□□□□ 0.9
PDE1C-206ENST00000396193 ZGPATQ8N5A5 531 aaKnown RBP20.66■□□□□ 0.9
PDE1C-206ENST00000396193 ZBTB40Q9NUA8 1239 aa20.66■□□□□ 0.9
PDE1C-206ENST00000396193 C16orf71Q8IYS4 520 aaPredicted RBP20.65■□□□□ 0.9
PDE1C-206ENST00000396193 CNNM3Q8NE01 707 aa20.65■□□□□ 0.9
PDE1C-206ENST00000396193 GTF2A1P52655 376 aaPredicted RBP20.65■□□□□ 0.9
PDE1C-206ENST00000396193 POLR3AO14802 1390 aaPredicted RBP20.65■□□□□ 0.9
PDE1C-206ENST00000396193 MICALCLQ6ZW33 695 aa20.65■□□□□ 0.9
PDE1C-206ENST00000396193 TESK2Q96S53 571 aa20.65■□□□□ 0.9
PDE1C-206ENST00000396193 INCENPQ9NQS7 918 aa20.65■□□□□ 0.9
PDE1C-206ENST00000396193 OGFRQ9NZT2 677 aa20.65■□□□□ 0.9
PDE1C-206ENST00000396193 PER1O15534 1290 aaPredicted RBP20.65■□□□□ 0.9
PDE1C-206ENST00000396193 NECAB1Q8N987 351 aa20.65■□□□□ 0.9
PDE1C-206ENST00000396193 CPLX3Q8WVH0 158 aa20.64■□□□□ 0.89
PDE1C-206ENST00000396193 ARFGAP3Q9NP61 516 aa20.64■□□□□ 0.89
PDE1C-206ENST00000396193 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.64■□□□□ 0.89
PDE1C-206ENST00000396193 MRPL50Q8N5N7 158 aaKnown RBP20.64■□□□□ 0.89
PDE1C-206ENST00000396193 TMX1Q9H3N1 280 aa20.64■□□□□ 0.89
PDE1C-206ENST00000396193 C14orf93Q9H972 538 aaKnown RBP20.64■□□□□ 0.89
PDE1C-206ENST00000396193 F13A1P00488 732 aa20.64■□□□□ 0.89
PDE1C-206ENST00000396193 ZSCAN16Q9H4T2 348 aaPredicted RBP20.64■□□□□ 0.89
PDE1C-206ENST00000396193 SLU7O95391 586 aaKnown RBP20.63■□□□□ 0.89
PDE1C-206ENST00000396193 ZNF397Q8NF99 534 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms