RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 MCTP2Q6DN12 878 aa11.54□□□□□ -0.56
CDRT1-204ENST00000395906 NBPF10Q6P3W6 841 aaKnown RBP11.54□□□□□ -0.56
CDRT1-204ENST00000395906 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.54□□□□□ -0.56
CDRT1-204ENST00000395906 GOLGA5Q8TBA6 731 aa11.54□□□□□ -0.56
CDRT1-204ENST00000395906 ADGRB1O14514 1584 aa11.54□□□□□ -0.56
CDRT1-204ENST00000395906 RIMS1Q86UR5 1692 aaKnown RBP11.54□□□□□ -0.56
CDRT1-204ENST00000395906 FBXO18Q8NFZ0 1043 aa11.54□□□□□ -0.56
CDRT1-204ENST00000395906 GTF3C6Q969F1 213 aa11.54□□□□□ -0.56
CDRT1-204ENST00000395906 MAP2K2P36507 400 aa11.53□□□□□ -0.56
CDRT1-204ENST00000395906 SSR1P43307 286 aaKnown RBP11.53□□□□□ -0.56
CDRT1-204ENST00000395906 ERO1AQ96HE7 468 aa11.53□□□□□ -0.56
CDRT1-204ENST00000395906 NEURL4Q96JN8 1562 aa11.53□□□□□ -0.56
CDRT1-204ENST00000395906 C16orf45Q96MC5 204 aaPredicted RBP11.53□□□□□ -0.56
CDRT1-204ENST00000395906 KNSTRNQ9Y448 316 aa11.53□□□□□ -0.56
CDRT1-204ENST00000395906 CCDC196A0A1B0GTZ2 297 aa11.53□□□□□ -0.56
CDRT1-204ENST00000395906 RPAINQ86UA6 219 aa11.53□□□□□ -0.56
CDRT1-204ENST00000395906 CEP89Q96ST8 783 aa11.53□□□□□ -0.56
CDRT1-204ENST00000395906 BSDC1Q9NW68 430 aaPredicted RBP11.53□□□□□ -0.56
CDRT1-204ENST00000395906 ZDHHC9Q9Y397 364 aa11.53□□□□□ -0.56
CDRT1-204ENST00000395906 FHOD1Q9Y613 1164 aa11.53□□□□□ -0.56
CDRT1-204ENST00000395906 V9GYY5 206 aaPredicted RBP11.53□□□□□ -0.56
CDRT1-204ENST00000395906 ZFYVE9O95405 1425 aa11.52□□□□□ -0.56
CDRT1-204ENST00000395906 TTC36A6NLP5 189 aa11.52□□□□□ -0.56
CDRT1-204ENST00000395906 KIF3CO14782 793 aa11.52□□□□□ -0.56
CDRT1-204ENST00000395906 ANKRD20A12PQ8NF67 263 aa11.52□□□□□ -0.56
CDRT1-204ENST00000395906 CFAP44Q96MT7 982 aa11.52□□□□□ -0.56
CDRT1-204ENST00000395906 EID1Q9Y6B2 187 aa11.52□□□□□ -0.56
CDRT1-204ENST00000395906 IQGAP1P46940 1657 aa11.52□□□□□ -0.56
CDRT1-204ENST00000395906 NCKAP5LQ9HCH0 1330 aa11.52□□□□□ -0.57
CDRT1-204ENST00000395906 PTPRMP28827 1452 aa11.52□□□□□ -0.57
CDRT1-204ENST00000395906 RLBP1P12271 317 aa11.52□□□□□ -0.57
CDRT1-204ENST00000395906 HDAC1Q13547 482 aaPredicted RBP11.52□□□□□ -0.57
CDRT1-204ENST00000395906 THEMISQ8N1K5 641 aaPredicted RBP11.52□□□□□ -0.57
CDRT1-204ENST00000395906 IQUBQ8NA54 791 aa11.52□□□□□ -0.57
CDRT1-204ENST00000395906 RTF1Q92541 710 aaKnown RBP11.52□□□□□ -0.57
CDRT1-204ENST00000395906 ASXL1Q8IXJ9 1541 aa11.52□□□□□ -0.57
CDRT1-204ENST00000395906 PLA2G4AP47712 749 aa11.51□□□□□ -0.57
CDRT1-204ENST00000395906 E2F4Q16254 413 aa11.51□□□□□ -0.57
CDRT1-204ENST00000395906 ZNF592Q92610 1267 aa11.51□□□□□ -0.57
CDRT1-204ENST00000395906 ALKQ9UM73 1620 aa11.51□□□□□ -0.57
CDRT1-204ENST00000395906 YTHDC2Q9H6S0 1430 aaKnown RBP11.51□□□□□ -0.57
CDRT1-204ENST00000395906 ELF2Q15723 593 aa11.51□□□□□ -0.57
CDRT1-204ENST00000395906 PPM1EQ8WY54 764 aa11.51□□□□□ -0.57
CDRT1-204ENST00000395906 FAM212AQ96EL1 285 aa11.51□□□□□ -0.57
CDRT1-204ENST00000395906 ZNF215Q9UL58 517 aaPredicted RBP11.51□□□□□ -0.57
CDRT1-204ENST00000395906 H2AFXP16104 143 aaPredicted RBP11.5□□□□□ -0.57
CDRT1-204ENST00000395906 OS9Q13438 667 aaPredicted RBP11.5□□□□□ -0.57
CDRT1-204ENST00000395906 ZKSCAN8Q15776 578 aaPredicted RBP11.5□□□□□ -0.57
CDRT1-204ENST00000395906 SMARCE1Q969G3 411 aa11.5□□□□□ -0.57
CDRT1-204ENST00000395906 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.5□□□□□ -0.57
CDRT1-204ENST00000395906 PNMA6AP0CW24 399 aaPredicted RBP11.5□□□□□ -0.57
CDRT1-204ENST00000395906 HSPA2P54652 639 aa11.5□□□□□ -0.57
CDRT1-204ENST00000395906 CEP135Q66GS9 1140 aa11.5□□□□□ -0.57
CDRT1-204ENST00000395906 CARD14Q9BXL6 1004 aa11.5□□□□□ -0.57
CDRT1-204ENST00000395906 IFT57Q9NWB7 429 aa11.5□□□□□ -0.57
CDRT1-204ENST00000395906 HDGFP51858 240 aaKnown RBP11.49□□□□□ -0.57
CDRT1-204ENST00000395906 BMP2KLQ5H9B9 411 aa11.49□□□□□ -0.57
CDRT1-204ENST00000395906 MMS22LQ6ZRQ5 1243 aa11.49□□□□□ -0.57
CDRT1-204ENST00000395906 JMYQ8N9B5 988 aa11.49□□□□□ -0.57
CDRT1-204ENST00000395906 UBR1Q8IWV7 1749 aa11.49□□□□□ -0.57
CDRT1-204ENST00000395906 RARSP54136 660 aaKnown RBP11.49□□□□□ -0.57
CDRT1-204ENST00000395906 C11orf91Q3C1V1 193 aa11.49□□□□□ -0.57
CDRT1-204ENST00000395906 AK7Q96M32 723 aa11.49□□□□□ -0.57
CDRT1-204ENST00000395906 LAMC1P11047 1609 aa11.48□□□□□ -0.57
CDRT1-204ENST00000395906 POLR3GO15318 223 aaPredicted RBP11.48□□□□□ -0.57
CDRT1-204ENST00000395906 HCLS1P14317 486 aaPredicted RBP11.48□□□□□ -0.57
CDRT1-204ENST00000395906 ST5P78524 1137 aa11.48□□□□□ -0.57
CDRT1-204ENST00000395906 NBPF6Q5VWK0 638 aa11.48□□□□□ -0.57
CDRT1-204ENST00000395906 NBPF5PQ86XG9 351 aaPredicted RBP11.48□□□□□ -0.57
CDRT1-204ENST00000395906 SPC24Q8NBT2 197 aa11.48□□□□□ -0.57
CDRT1-204ENST00000395906 NBPF4Q96M43 638 aa11.48□□□□□ -0.57
CDRT1-204ENST00000395906 TERF2IPQ9NYB0 399 aa11.48□□□□□ -0.57
CDRT1-204ENST00000395906 IVLP07476 585 aa11.48□□□□□ -0.57
CDRT1-204ENST00000395906 SETQ01105 290 aaPredicted RBP11.48□□□□□ -0.57
CDRT1-204ENST00000395906 BIRC2Q13490 618 aa11.48□□□□□ -0.57
CDRT1-204ENST00000395906 MVPQ14764 893 aaKnown RBP11.48□□□□□ -0.57
CDRT1-204ENST00000395906 PPP2R5AQ15172 486 aa11.48□□□□□ -0.57
CDRT1-204ENST00000395906 PSD3Q9NYI0 1048 aa11.48□□□□□ -0.57
CDRT1-204ENST00000395906 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.48□□□□□ -0.57
CDRT1-204ENST00000395906 KIAA1210Q9ULL0 1709 aa11.48□□□□□ -0.57
CDRT1-204ENST00000395906 KLHL33A6NCF5 533 aa11.47□□□□□ -0.57
CDRT1-204ENST00000395906 PLCB2Q00722 1185 aa11.47□□□□□ -0.57
CDRT1-204ENST00000395906 TPD52L1Q16890 204 aaPredicted RBP11.47□□□□□ -0.57
CDRT1-204ENST00000395906 CCDC183Q5T5S1 534 aa11.47□□□□□ -0.57
CDRT1-204ENST00000395906 CALR3Q96L12 384 aaKnown RBP11.47□□□□□ -0.57
CDRT1-204ENST00000395906 CDK19Q9BWU1 502 aa11.47□□□□□ -0.57
CDRT1-204ENST00000395906 APAF1O14727 1248 aa11.47□□□□□ -0.57
CDRT1-204ENST00000395906 PTGS1P23219 599 aa11.47□□□□□ -0.57
CDRT1-204ENST00000395906 PPP2R1AP30153 589 aa11.47□□□□□ -0.57
CDRT1-204ENST00000395906 MAP9Q49MG5 647 aa11.47□□□□□ -0.57
CDRT1-204ENST00000395906 AMOTL2Q9Y2J4 779 aa11.47□□□□□ -0.57
CDRT1-204ENST00000395906 SLU7O95391 586 aaKnown RBP11.46□□□□□ -0.57
CDRT1-204ENST00000395906 CPP00450 1065 aa11.46□□□□□ -0.57
CDRT1-204ENST00000395906 TBC1D22AQ8WUA7 517 aa11.46□□□□□ -0.57
CDRT1-204ENST00000395906 CHAMP1Q96JM3 812 aa11.46□□□□□ -0.57
CDRT1-204ENST00000395906 EVC2Q86UK5 1308 aa11.46□□□□□ -0.58
CDRT1-204ENST00000395906 ZGPATQ8N5A5 531 aaKnown RBP11.46□□□□□ -0.58
CDRT1-204ENST00000395906 UBXN6Q9BZV1 441 aa11.46□□□□□ -0.58
CDRT1-204ENST00000395906 TNNQ9UQP3 1299 aa11.46□□□□□ -0.58
CDRT1-204ENST00000395906 SETBP1Q9Y6X0 1596 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms