RNA–Protein interactions for RNA: ENST00000395837.1

UBB-202, Transcript of ubiquitin B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene UBB, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-202ENST00000395837 TTC5Q8N0Z6 440 aa13.25□□□□□ -0.29
UBB-202ENST00000395837 ZBTB1Q9Y2K1 713 aa13.25□□□□□ -0.29
UBB-202ENST00000395837 COL15A1P39059 1388 aa13.24□□□□□ -0.29
UBB-202ENST00000395837 SOS1Q07889 1333 aaPredicted RBP13.24□□□□□ -0.29
UBB-202ENST00000395837 KIF7Q2M1P5 1343 aa13.24□□□□□ -0.29
UBB-202ENST00000395837 RASSF7Q02833 373 aa13.24□□□□□ -0.29
UBB-202ENST00000395837 MTHFSDQ2M296 383 aaKnown RBP13.24□□□□□ -0.29
UBB-202ENST00000395837 AMER1Q5JTC6 1135 aaPredicted RBP13.24□□□□□ -0.29
UBB-202ENST00000395837 RRAGCQ9HB90 399 aa13.24□□□□□ -0.29
UBB-202ENST00000395837 SCN11AQ9UI33 1791 aa13.24□□□□□ -0.29
UBB-202ENST00000395837 NPHP1O15259 732 aa13.23□□□□□ -0.29
UBB-202ENST00000395837 CYP19A1P11511 503 aaPredicted RBP13.23□□□□□ -0.29
UBB-202ENST00000395837 HTRA3P83110 453 aa13.23□□□□□ -0.29
UBB-202ENST00000395837 NFIXQ14938 502 aa13.23□□□□□ -0.29
UBB-202ENST00000395837 SERPINB2P05120 415 aa13.22□□□□□ -0.29
UBB-202ENST00000395837 TM4SF1P30408 202 aa13.22□□□□□ -0.29
UBB-202ENST00000395837 TEFQ10587 303 aa13.22□□□□□ -0.29
UBB-202ENST00000395837 NPM2Q86SE8 214 aaKnown RBP13.22□□□□□ -0.29
UBB-202ENST00000395837 C2CD5Q86YS7 1000 aa13.22□□□□□ -0.29
UBB-202ENST00000395837 ZNF219Q9P2Y4 722 aaPredicted RBP13.22□□□□□ -0.29
UBB-202ENST00000395837 NARFQ9UHQ1 456 aa13.22□□□□□ -0.29
UBB-202ENST00000395837 BRCA1P38398 1863 aaKnown RBP13.22□□□□□ -0.29
UBB-202ENST00000395837 STARD3NLO95772 234 aa13.21□□□□□ -0.29
UBB-202ENST00000395837 RBM46Q8TBY0 533 aaKnown RBP13.21□□□□□ -0.29
UBB-202ENST00000395837 ARFGEF1Q9Y6D6 1849 aa13.2□□□□□ -0.3
UBB-202ENST00000395837 H0YIN7 160 aa13.2□□□□□ -0.3
UBB-202ENST00000395837 ZNF622Q969S3 477 aaKnown RBP eCLIP13.2□□□□□ -0.3
UBB-202ENST00000395837 MRC1P22897 1456 aa13.19□□□□□ -0.3
UBB-202ENST00000395837 CCDC24Q8N4L8 307 aa13.19□□□□□ -0.3
UBB-202ENST00000395837 COL13A1Q5TAT6 717 aaPredicted RBP13.18□□□□□ -0.3
UBB-202ENST00000395837 TTLL6Q8N841 843 aa13.18□□□□□ -0.3
UBB-202ENST00000395837 GAS2L2Q8NHY3 880 aa13.18□□□□□ -0.3
UBB-202ENST00000395837 BCL2L12Q9HB09 334 aa13.18□□□□□ -0.3
UBB-202ENST00000395837 TBC1D2BQ9UPU7 963 aa13.18□□□□□ -0.3
UBB-202ENST00000395837 CARMIL3Q8ND23 1372 aa13.18□□□□□ -0.3
UBB-202ENST00000395837 A0A087WZG4 1122 aa13.17□□□□□ -0.3
UBB-202ENST00000395837 GNAT3A8MTJ3 354 aa13.17□□□□□ -0.3
UBB-202ENST00000395837 LMNB1P20700 586 aa13.17□□□□□ -0.3
UBB-202ENST00000395837 FSTL1Q12841 308 aa13.17□□□□□ -0.3
UBB-202ENST00000395837 VSIG10Q8N0Z9 540 aa13.17□□□□□ -0.3
UBB-202ENST00000395837 ZNF496Q96IT1 587 aaPredicted RBP13.17□□□□□ -0.3
UBB-202ENST00000395837 WDR90Q96KV7 1748 aa13.16□□□□□ -0.3
UBB-202ENST00000395837 VIRMAQ69YN4 1812 aaKnown RBP13.16□□□□□ -0.3
UBB-202ENST00000395837 ADAMTS7Q9UKP4 1686 aa13.16□□□□□ -0.3
UBB-202ENST00000395837 TBC1D9BQ66K14 1250 aa13.16□□□□□ -0.3
UBB-202ENST00000395837 TNS4Q8IZW8 715 aa13.16□□□□□ -0.3
UBB-202ENST00000395837 DNAJC5GQ8N7S2 189 aa13.16□□□□□ -0.3
UBB-202ENST00000395837 SMC1BQ8NDV3 1235 aa13.16□□□□□ -0.3
UBB-202ENST00000395837 AFDNP55196 1824 aaKnown RBP13.16□□□□□ -0.3
UBB-202ENST00000395837 ZNF790Q6PG37 636 aa13.15□□□□□ -0.3
UBB-202ENST00000395837 KLRG1Q96E93 195 aa13.15□□□□□ -0.3
UBB-202ENST00000395837 HEG1Q9ULI3 1381 aa13.15□□□□□ -0.3
UBB-202ENST00000395837 TNRC6CQ9HCJ0 1690 aaKnown RBP13.15□□□□□ -0.31
UBB-202ENST00000395837 C21orf2O43822 256 aa13.14□□□□□ -0.31
UBB-202ENST00000395837 PRELPP51888 382 aa13.14□□□□□ -0.31
UBB-202ENST00000395837 EIF5P55010 431 aaKnown RBP13.14□□□□□ -0.31
UBB-202ENST00000395837 IL17REQ8NFR9 667 aa13.14□□□□□ -0.31
UBB-202ENST00000395837 CFAP53Q96M91 514 aa13.14□□□□□ -0.31
UBB-202ENST00000395837 FMNL2Q96PY5 1086 aa13.14□□□□□ -0.31
UBB-202ENST00000395837 GLTPD2A6NH11 291 aa13.13□□□□□ -0.31
UBB-202ENST00000395837 BTBD11A6QL63 1104 aa13.13□□□□□ -0.31
UBB-202ENST00000395837 PER1O15534 1290 aaPredicted RBP13.13□□□□□ -0.31
UBB-202ENST00000395837 A1BGP04217 495 aa13.13□□□□□ -0.31
UBB-202ENST00000395837 VEGFAP15692 232 aaPredicted RBP13.13□□□□□ -0.31
UBB-202ENST00000395837 PRKAR2BP31323 418 aa13.13□□□□□ -0.31
UBB-202ENST00000395837 PDE6BP35913 854 aa13.13□□□□□ -0.31
UBB-202ENST00000395837 PIP4K2AP48426 406 aaPredicted RBP13.13□□□□□ -0.31
UBB-202ENST00000395837 ST5P78524 1137 aa13.13□□□□□ -0.31
UBB-202ENST00000395837 CNBD1Q8NA66 436 aa13.13□□□□□ -0.31
UBB-202ENST00000395837 SETDB2Q96T68 719 aa13.13□□□□□ -0.31
UBB-202ENST00000395837 TEX13AQ9BXU3 409 aaPredicted RBP13.13□□□□□ -0.31
UBB-202ENST00000395837 NFKBIEO00221 500 aa13.12□□□□□ -0.31
UBB-202ENST00000395837 KCNQ3O43525 872 aa13.12□□□□□ -0.31
UBB-202ENST00000395837 ERFEQ4G0M1 354 aa13.12□□□□□ -0.31
UBB-202ENST00000395837 PRR5LQ6MZQ0 368 aa13.12□□□□□ -0.31
UBB-202ENST00000395837 RTF1Q92541 710 aaKnown RBP13.12□□□□□ -0.31
UBB-202ENST00000395837 UBR2Q8IWV8 1755 aa13.12□□□□□ -0.31
UBB-202ENST00000395837 ZC3H4Q9UPT8 1303 aaKnown RBP13.12□□□□□ -0.31
UBB-202ENST00000395837 TIAM2Q8IVF5 1701 aa13.11□□□□□ -0.31
UBB-202ENST00000395837 NRXN2Q9P2S2 1712 aa13.11□□□□□ -0.31
UBB-202ENST00000395837 SBF1O95248 1867 aa13.11□□□□□ -0.31
UBB-202ENST00000395837 FAM177BA6PVY3 158 aa13.11□□□□□ -0.31
UBB-202ENST00000395837 IL6STP40189 918 aaPredicted RBP13.11□□□□□ -0.31
UBB-202ENST00000395837 DPY19L2Q6NUT2 758 aa13.11□□□□□ -0.31
UBB-202ENST00000395837 DZIP3Q86Y13 1208 aaKnown RBP13.11□□□□□ -0.31
UBB-202ENST00000395837 BRIP1Q9BX63 1249 aa13.11□□□□□ -0.31
UBB-202ENST00000395837 COL3A1P02461 1466 aaPredicted RBP13.1□□□□□ -0.31
UBB-202ENST00000395837 DLEC1Q9Y238 1755 aa13.1□□□□□ -0.31
UBB-202ENST00000395837 U2AF1L5P0DN76 240 aaPredicted RBP13.1□□□□□ -0.31
UBB-202ENST00000395837 U2AF1Q01081 240 aaKnown RBP eCLIP13.1□□□□□ -0.31
UBB-202ENST00000395837 PHACTR3Q96KR7 559 aa13.1□□□□□ -0.31
UBB-202ENST00000395837 NUDCQ9Y266 331 aa13.1□□□□□ -0.31
UBB-202ENST00000395837 SCN7AQ01118 1682 aa13.09□□□□□ -0.31
UBB-202ENST00000395837 MCM10Q7L590 875 aa13.09□□□□□ -0.31
UBB-202ENST00000395837 NBPF5PQ86XG9 351 aaPredicted RBP13.09□□□□□ -0.31
UBB-202ENST00000395837 TAOK3Q9H2K8 898 aa13.09□□□□□ -0.31
UBB-202ENST00000395837 PRAMEF22A3QJZ6 481 aa13.08□□□□□ -0.32
UBB-202ENST00000395837 CAMTA2O94983 1202 aa13.08□□□□□ -0.32
UBB-202ENST00000395837 PRPF40BQ6NWY9 871 aaKnown RBP13.08□□□□□ -0.32
UBB-202ENST00000395837 CNKSR1Q969H4 720 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms