RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 FLIIQ13045 1269 aa17.39■□□□□ 0.37
VAPB-202ENST00000395802 RBM42Q9BTD8 480 aaKnown RBP17.39■□□□□ 0.37
VAPB-202ENST00000395802 CHPF2Q9P2E5 772 aa17.39■□□□□ 0.37
VAPB-202ENST00000395802 HMGB2P26583 209 aaKnown RBP17.38■□□□□ 0.37
VAPB-202ENST00000395802 FKBP5Q13451 457 aaPredicted RBP17.37■□□□□ 0.37
VAPB-202ENST00000395802 DDX58O95786 925 aaKnown RBP17.37■□□□□ 0.37
VAPB-202ENST00000395802 CLUAP1Q96AJ1 413 aa17.37■□□□□ 0.37
VAPB-202ENST00000395802 DDX19BQ9UMR2 479 aa17.37■□□□□ 0.37
VAPB-202ENST00000395802 USP16Q9Y5T5 823 aa17.37■□□□□ 0.37
VAPB-202ENST00000395802 PRAMEF22A3QJZ6 481 aa17.36■□□□□ 0.37
VAPB-202ENST00000395802 MVPQ14764 893 aaKnown RBP17.36■□□□□ 0.37
VAPB-202ENST00000395802 C20orf194Q5TEA3 1177 aa17.36■□□□□ 0.37
VAPB-202ENST00000395802 PALLDQ8WX93 1383 aa17.36■□□□□ 0.37
VAPB-202ENST00000395802 KCNQ2O43526 872 aa17.35■□□□□ 0.37
VAPB-202ENST00000395802 PANK1Q8TE04 598 aa17.35■□□□□ 0.37
VAPB-202ENST00000395802 CRBNQ96SW2 442 aa17.35■□□□□ 0.37
VAPB-202ENST00000395802 BCL11BQ9C0K0 894 aaPredicted RBP17.35■□□□□ 0.37
VAPB-202ENST00000395802 LAMB4A4D0S4 1761 aa17.35■□□□□ 0.37
VAPB-202ENST00000395802 NHSQ6T4R5 1651 aa17.35■□□□□ 0.37
VAPB-202ENST00000395802 RGS17Q9UGC6 210 aaPredicted RBP17.35■□□□□ 0.37
VAPB-202ENST00000395802 ABCC4O15439 1325 aa17.34■□□□□ 0.37
VAPB-202ENST00000395802 LOC102724428A0A0B4J2F2 783 aa17.34■□□□□ 0.37
VAPB-202ENST00000395802 SIK1P57059 783 aa17.34■□□□□ 0.37
VAPB-202ENST00000395802 ITPRIPQ8IWB1 547 aa17.34■□□□□ 0.37
VAPB-202ENST00000395802 COG6Q9Y2V7 657 aa17.34■□□□□ 0.37
VAPB-202ENST00000395802 ATP6V1AP38606 617 aa17.33■□□□□ 0.37
VAPB-202ENST00000395802 CCT4P50991 539 aaKnown RBP17.33■□□□□ 0.37
VAPB-202ENST00000395802 NPM2Q86SE8 214 aaKnown RBP17.33■□□□□ 0.37
VAPB-202ENST00000395802 EXOC6Q8TAG9 804 aa17.33■□□□□ 0.37
VAPB-202ENST00000395802 C5P01031 1676 aa17.33■□□□□ 0.36
VAPB-202ENST00000395802 G2E3Q7L622 706 aa17.33■□□□□ 0.36
VAPB-202ENST00000395802 RLBP1P12271 317 aa17.32■□□□□ 0.36
VAPB-202ENST00000395802 PDIA6Q15084 440 aa17.32■□□□□ 0.36
VAPB-202ENST00000395802 FAM182BQ5T319 152 aa17.32■□□□□ 0.36
VAPB-202ENST00000395802 PHAXQ9H814 394 aaKnown RBP17.32■□□□□ 0.36
VAPB-202ENST00000395802 MYL6BP14649 208 aa17.31■□□□□ 0.36
VAPB-202ENST00000395802 INTS3Q68E01 1043 aaKnown RBP17.31■□□□□ 0.36
VAPB-202ENST00000395802 POTEAQ6S8J7 498 aa17.31■□□□□ 0.36
VAPB-202ENST00000395802 DNAJC10Q8IXB1 793 aa17.31■□□□□ 0.36
VAPB-202ENST00000395802 TMEM57Q8N5G2 664 aa17.31■□□□□ 0.36
VAPB-202ENST00000395802 BRWD3Q6RI45 1802 aa17.3■□□□□ 0.36
VAPB-202ENST00000395802 PXDNLA1KZ92 1463 aa17.3■□□□□ 0.36
VAPB-202ENST00000395802 KSR2Q6VAB6 950 aa17.3■□□□□ 0.36
VAPB-202ENST00000395802 RGS12O14924 1447 aa17.3■□□□□ 0.36
VAPB-202ENST00000395802 ZNF831Q5JPB2 1677 aa17.29■□□□□ 0.36
VAPB-202ENST00000395802 CYP19A1P11511 503 aaPredicted RBP17.29■□□□□ 0.36
VAPB-202ENST00000395802 B4GALNT3Q6L9W6 998 aa17.29■□□□□ 0.36
VAPB-202ENST00000395802 SLC4A10Q6U841 1118 aa17.29■□□□□ 0.36
VAPB-202ENST00000395802 SBF2Q86WG5 1849 aa17.29■□□□□ 0.36
VAPB-202ENST00000395802 PI4KAP2A4QPH2 592 aa17.28■□□□□ 0.36
VAPB-202ENST00000395802 PROSER3Q2NL68 480 aa17.28■□□□□ 0.36
VAPB-202ENST00000395802 PI4KAP1Q8N8J0 262 aa17.28■□□□□ 0.36
VAPB-202ENST00000395802 DNAAF4Q8WXU2 420 aa17.28■□□□□ 0.36
VAPB-202ENST00000395802 BTAF1O14981 1849 aa17.28■□□□□ 0.36
VAPB-202ENST00000395802 CICQ96RK0 1608 aaPredicted RBP17.28■□□□□ 0.36
VAPB-202ENST00000395802 ANXA1P04083 346 aa17.28■□□□□ 0.36
VAPB-202ENST00000395802 A1BGP04217 495 aa17.28■□□□□ 0.36
VAPB-202ENST00000395802 NEXNQ0ZGT2 675 aa17.28■□□□□ 0.36
VAPB-202ENST00000395802 ANKRD13DQ6ZTN6 518 aa17.28■□□□□ 0.36
VAPB-202ENST00000395802 COPS6Q7L5N1 327 aa17.28■□□□□ 0.36
VAPB-202ENST00000395802 RIC3Q7Z5B4 369 aa17.28■□□□□ 0.36
VAPB-202ENST00000395802 ILDR1Q86SU0 546 aaPredicted RBP17.28■□□□□ 0.36
VAPB-202ENST00000395802 CCDC136Q96JN2 1154 aa17.28■□□□□ 0.36
VAPB-202ENST00000395802 SLC4A9Q96Q91 983 aa17.28■□□□□ 0.36
VAPB-202ENST00000395802 TNNQ9UQP3 1299 aa17.28■□□□□ 0.36
VAPB-202ENST00000395802 AIMP1Q12904 312 aaKnown RBP17.27■□□□□ 0.36
VAPB-202ENST00000395802 XAGE3Q8WTP9 111 aa17.27■□□□□ 0.36
VAPB-202ENST00000395802 NBPF26B4DH59 902 aa17.26■□□□□ 0.35
VAPB-202ENST00000395802 IL6STP40189 918 aaPredicted RBP17.26■□□□□ 0.35
VAPB-202ENST00000395802 NBPF14Q5TI25 921 aa17.26■□□□□ 0.35
VAPB-202ENST00000395802 NBPF10Q6P3W6 841 aaKnown RBP17.26■□□□□ 0.35
VAPB-202ENST00000395802 NBPF15Q8N660 670 aa17.26■□□□□ 0.35
VAPB-202ENST00000395802 F6X3S4 739 aa17.26■□□□□ 0.35
VAPB-202ENST00000395802 LRP10Q7Z4F1 713 aa17.26■□□□□ 0.35
VAPB-202ENST00000395802 PLBD2Q8NHP8 589 aa17.26■□□□□ 0.35
VAPB-202ENST00000395802 SRCIN1Q9C0H9 1055 aa17.26■□□□□ 0.35
VAPB-202ENST00000395802 CCNL1Q9UK58 526 aaPredicted RBP17.26■□□□□ 0.35
VAPB-202ENST00000395802 HDAC5Q9UQL6 1122 aa17.26■□□□□ 0.35
VAPB-202ENST00000395802 TRIM37O94972 964 aa17.25■□□□□ 0.35
VAPB-202ENST00000395802 SLC27A3Q5K4L6 730 aa17.25■□□□□ 0.35
VAPB-202ENST00000395802 KIF6Q6ZMV9 814 aa17.25■□□□□ 0.35
VAPB-202ENST00000395802 CCDC87Q9NVE4 849 aa17.25■□□□□ 0.35
VAPB-202ENST00000395802 MAP3K2Q9Y2U5 619 aa17.25■□□□□ 0.35
VAPB-202ENST00000395802 ATP10DQ9P241 1426 aa17.25■□□□□ 0.35
VAPB-202ENST00000395802 ZBTB7BO15156 539 aaPredicted RBP17.24■□□□□ 0.35
VAPB-202ENST00000395802 TJP1Q07157 1748 aa17.24■□□□□ 0.35
VAPB-202ENST00000395802 ADCY9O60503 1353 aa17.23■□□□□ 0.35
VAPB-202ENST00000395802 ALDH1L1O75891 902 aa17.23■□□□□ 0.35
VAPB-202ENST00000395802 GNAI3P08754 354 aa17.23■□□□□ 0.35
VAPB-202ENST00000395802 CRKLP46109 303 aaKnown RBP17.23■□□□□ 0.35
VAPB-202ENST00000395802 RC3H1Q5TC82 1133 aaKnown RBP17.23■□□□□ 0.35
VAPB-202ENST00000395802 PTF1AQ7RTS3 328 aa17.23■□□□□ 0.35
VAPB-202ENST00000395802 LINS1Q8NG48 757 aa17.23■□□□□ 0.35
VAPB-202ENST00000395802 ZBTB40Q9NUA8 1239 aa17.23■□□□□ 0.35
VAPB-202ENST00000395802 IBTKQ9P2D0 1353 aaPredicted RBP17.23■□□□□ 0.35
VAPB-202ENST00000395802 CNTNAP4Q9C0A0 1308 aa17.22■□□□□ 0.35
VAPB-202ENST00000395802 PIP4K2AP48426 406 aaPredicted RBP17.22■□□□□ 0.35
VAPB-202ENST00000395802 ITPK1Q13572 414 aa17.22■□□□□ 0.35
VAPB-202ENST00000395802 METTL22Q9BUU2 404 aaPredicted RBP17.22■□□□□ 0.35
VAPB-202ENST00000395802 ZBTB1Q9Y2K1 713 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms