RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 OS9Q13438 667 aaPredicted RBP13.52□□□□□ -0.24
RAPGEF3-202ENST00000395358 TTC31Q49AM3 519 aaPredicted RBP13.52□□□□□ -0.25
RAPGEF3-202ENST00000395358 TXLNBQ8N3L3 684 aa13.52□□□□□ -0.25
RAPGEF3-202ENST00000395358 GAS2L2Q8NHY3 880 aa13.52□□□□□ -0.25
RAPGEF3-202ENST00000395358 ADAMTS2O95450 1211 aa13.51□□□□□ -0.25
RAPGEF3-202ENST00000395358 TEFQ10587 303 aa13.51□□□□□ -0.25
RAPGEF3-202ENST00000395358 PLEKHO1Q53GL0 409 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF3-202ENST00000395358 CABLES1Q8TDN4 633 aa13.51□□□□□ -0.25
RAPGEF3-202ENST00000395358 TATP17735 454 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF3-202ENST00000395358 BMS1Q14692 1282 aaKnown RBP13.51□□□□□ -0.25
RAPGEF3-202ENST00000395358 CCDC91Q7Z6B0 441 aa13.51□□□□□ -0.25
RAPGEF3-202ENST00000395358 LNPKQ9C0E8 428 aa13.51□□□□□ -0.25
RAPGEF3-202ENST00000395358 ZNF445P59923 1031 aa13.5□□□□□ -0.25
RAPGEF3-202ENST00000395358 TERF2Q15554 542 aa13.5□□□□□ -0.25
RAPGEF3-202ENST00000395358 HSP90AB3PQ58FF7 597 aa13.5□□□□□ -0.25
RAPGEF3-202ENST00000395358 HSP90AB2PQ58FF8 381 aa13.5□□□□□ -0.25
RAPGEF3-202ENST00000395358 KRBA2Q6ZNG9 492 aa13.5□□□□□ -0.25
RAPGEF3-202ENST00000395358 FAM184AQ8NB25 1140 aa13.5□□□□□ -0.25
RAPGEF3-202ENST00000395358 IQGAP1P46940 1657 aa13.5□□□□□ -0.25
RAPGEF3-202ENST00000395358 CCAR2Q8N163 923 aaKnown RBP13.5□□□□□ -0.25
RAPGEF3-202ENST00000395358 ARHGEF10O15013 1369 aa13.5□□□□□ -0.25
RAPGEF3-202ENST00000395358 CT47A1Q5JQC4 288 aaPredicted RBP13.5□□□□□ -0.25
RAPGEF3-202ENST00000395358 GIMAP7Q8NHV1 300 aa13.5□□□□□ -0.25
RAPGEF3-202ENST00000395358 PLCD4Q9BRC7 762 aa13.5□□□□□ -0.25
RAPGEF3-202ENST00000395358 USP6P35125 1406 aa13.5□□□□□ -0.25
RAPGEF3-202ENST00000395358 CHRNA2Q15822 529 aa13.49□□□□□ -0.25
RAPGEF3-202ENST00000395358 GORABQ5T7V8 394 aa13.49□□□□□ -0.25
RAPGEF3-202ENST00000395358 MNS1Q8NEH6 495 aa13.49□□□□□ -0.25
RAPGEF3-202ENST00000395358 GTF3C6Q969F1 213 aa13.49□□□□□ -0.25
RAPGEF3-202ENST00000395358 TULP4Q9NRJ4 1543 aa13.49□□□□□ -0.25
RAPGEF3-202ENST00000395358 MNAT1P51948 309 aa13.49□□□□□ -0.25
RAPGEF3-202ENST00000395358 HNRNPH2P55795 449 aaKnown RBP13.49□□□□□ -0.25
RAPGEF3-202ENST00000395358 A0A1B0GUL7 405 aa13.49□□□□□ -0.25
RAPGEF3-202ENST00000395358 RDXP35241 583 aaKnown RBP13.49□□□□□ -0.25
RAPGEF3-202ENST00000395358 SSR1P43307 286 aaKnown RBP13.49□□□□□ -0.25
RAPGEF3-202ENST00000395358 PDE3AQ14432 1141 aa13.49□□□□□ -0.25
RAPGEF3-202ENST00000395358 LRRFIP2Q9Y608 721 aaKnown RBP13.49□□□□□ -0.25
RAPGEF3-202ENST00000395358 POLR3AO14802 1390 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF3-202ENST00000395358 NKTRP30414 1462 aaKnown RBP13.49□□□□□ -0.25
RAPGEF3-202ENST00000395358 MAP3K19Q56UN5 1328 aa13.48□□□□□ -0.25
RAPGEF3-202ENST00000395358 ZNF397Q8NF99 534 aaPredicted RBP13.48□□□□□ -0.25
RAPGEF3-202ENST00000395358 GEMIN8Q9NWZ8 242 aaKnown RBP13.48□□□□□ -0.25
RAPGEF3-202ENST00000395358 FLT4P35916 1363 aa13.48□□□□□ -0.25
RAPGEF3-202ENST00000395358 ICE2Q659A1 982 aa13.48□□□□□ -0.25
RAPGEF3-202ENST00000395358 ZRSR1Q15695 479 aaKnown RBP13.48□□□□□ -0.25
RAPGEF3-202ENST00000395358 BRINP3Q76B58 766 aa13.48□□□□□ -0.25
RAPGEF3-202ENST00000395358 ZNF710Q8N1W2 664 aa13.48□□□□□ -0.25
RAPGEF3-202ENST00000395358 USP19O94966 1318 aa13.47□□□□□ -0.25
RAPGEF3-202ENST00000395358 LMAN1P49257 510 aa13.47□□□□□ -0.25
RAPGEF3-202ENST00000395358 SMC5Q8IY18 1101 aa13.47□□□□□ -0.25
RAPGEF3-202ENST00000395358 TRIM5Q9C035 493 aa13.47□□□□□ -0.25
RAPGEF3-202ENST00000395358 EP400NLQ6ZTU2 488 aa13.47□□□□□ -0.25
RAPGEF3-202ENST00000395358 HOMER1Q86YM7 354 aa13.47□□□□□ -0.25
RAPGEF3-202ENST00000395358 ANKRD24Q8TF21 1146 aa13.47□□□□□ -0.25
RAPGEF3-202ENST00000395358 TMCO3Q6UWJ1 677 aa13.47□□□□□ -0.25
RAPGEF3-202ENST00000395358 NGLY1Q96IV0 654 aa13.47□□□□□ -0.25
RAPGEF3-202ENST00000395358 CHMP3Q9Y3E7 222 aa13.47□□□□□ -0.25
RAPGEF3-202ENST00000395358 MED14O60244 1454 aa13.46□□□□□ -0.25
RAPGEF3-202ENST00000395358 ANKRD45Q5TZF3 282 aa13.46□□□□□ -0.25
RAPGEF3-202ENST00000395358 ANKRD20A12PQ8NF67 263 aa13.46□□□□□ -0.25
RAPGEF3-202ENST00000395358 DNAAF4Q8WXU2 420 aa13.46□□□□□ -0.25
RAPGEF3-202ENST00000395358 ZBTB12Q9Y330 459 aaPredicted RBP13.46□□□□□ -0.25
RAPGEF3-202ENST00000395358 H0YHG0 523 aa13.46□□□□□ -0.26
RAPGEF3-202ENST00000395358 USP8P40818 1118 aa13.46□□□□□ -0.26
RAPGEF3-202ENST00000395358 NCOA3Q9Y6Q9 1424 aa13.46□□□□□ -0.26
RAPGEF3-202ENST00000395358 CASQ1P31415 396 aa13.45□□□□□ -0.26
RAPGEF3-202ENST00000395358 SPG7Q9UQ90 795 aa13.45□□□□□ -0.26
RAPGEF3-202ENST00000395358 IFT172Q9UG01 1749 aa13.45□□□□□ -0.26
RAPGEF3-202ENST00000395358 GNAI1P63096 354 aa13.45□□□□□ -0.26
RAPGEF3-202ENST00000395358 ZNF530Q6P9A1 599 aaPredicted RBP13.45□□□□□ -0.26
RAPGEF3-202ENST00000395358 NEK11Q8NG66 645 aa13.45□□□□□ -0.26
RAPGEF3-202ENST00000395358 IP6K1Q92551 441 aa13.45□□□□□ -0.26
RAPGEF3-202ENST00000395358 NCAPGQ9BPX3 1015 aa13.45□□□□□ -0.26
RAPGEF3-202ENST00000395358 IBSPP21815 317 aaPredicted RBP13.45□□□□□ -0.26
RAPGEF3-202ENST00000395358 FEZ2Q9UHY8 353 aaPredicted RBP13.45□□□□□ -0.26
RAPGEF3-202ENST00000395358 CEP83Q9Y592 693 aa13.45□□□□□ -0.26
RAPGEF3-202ENST00000395358 RAD51AP2Q09MP3 1159 aa13.44□□□□□ -0.26
RAPGEF3-202ENST00000395358 EIF4A2Q14240 407 aaKnown RBP13.44□□□□□ -0.26
RAPGEF3-202ENST00000395358 USHBP1Q8N6Y0 703 aa13.44□□□□□ -0.26
RAPGEF3-202ENST00000395358 E2F4Q16254 413 aa13.44□□□□□ -0.26
RAPGEF3-202ENST00000395358 RNF216Q9NWF9 866 aaPredicted RBP13.44□□□□□ -0.26
RAPGEF3-202ENST00000395358 CPS1P31327 1500 aa13.44□□□□□ -0.26
RAPGEF3-202ENST00000395358 C1orf167Q5SNV9 1468 aa13.44□□□□□ -0.26
RAPGEF3-202ENST00000395358 HOXC9P31274 260 aa13.44□□□□□ -0.26
RAPGEF3-202ENST00000395358 NFE2L2Q16236 605 aa13.44□□□□□ -0.26
RAPGEF3-202ENST00000395358 TMPOP42166 694 aaKnown RBP13.44□□□□□ -0.26
RAPGEF3-202ENST00000395358 CFAP44Q96MT7 982 aa13.44□□□□□ -0.26
RAPGEF3-202ENST00000395358 JRKLQ9Y4A0 524 aa13.44□□□□□ -0.26
RAPGEF3-202ENST00000395358 SLC20A2Q08357 652 aa13.43□□□□□ -0.26
RAPGEF3-202ENST00000395358 LRCH2Q5VUJ6 765 aa13.43□□□□□ -0.26
RAPGEF3-202ENST00000395358 YY1AP1Q9H869 796 aa13.43□□□□□ -0.26
RAPGEF3-202ENST00000395358 SBNO1A3KN83 1393 aa13.43□□□□□ -0.26
RAPGEF3-202ENST00000395358 SARNPP82979 210 aaKnown RBP13.43□□□□□ -0.26
RAPGEF3-202ENST00000395358 CREBRFQ8IUR6 639 aa13.43□□□□□ -0.26
RAPGEF3-202ENST00000395358 STK31Q9BXU1 1019 aa13.43□□□□□ -0.26
RAPGEF3-202ENST00000395358 APBB1O00213 710 aa13.43□□□□□ -0.26
RAPGEF3-202ENST00000395358 CCDC172P0C7W6 258 aa13.43□□□□□ -0.26
RAPGEF3-202ENST00000395358 HCLS1P14317 486 aaPredicted RBP13.43□□□□□ -0.26
RAPGEF3-202ENST00000395358 MAP2K2P36507 400 aa13.43□□□□□ -0.26
RAPGEF3-202ENST00000395358 CWC22Q9HCG8 908 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms