RNA–Protein interactions for RNA: ENST00000394829.6

PPP3CB-204, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-204ENST00000394829 MCCP23508 829 aa15.2■□□□□ 0.02
PPP3CB-204ENST00000394829 UPF3BQ9BZI7 483 aaKnown RBP15.2■□□□□ 0.02
PPP3CB-204ENST00000394829 N4BP2Q86UW6 1770 aaPredicted RBP15.2■□□□□ 0.02
PPP3CB-204ENST00000394829 RRP9O43818 475 aaKnown RBP15.2■□□□□ 0.02
PPP3CB-204ENST00000394829 MAP4K4O95819 1239 aaPredicted RBP15.19■□□□□ 0.02
PPP3CB-204ENST00000394829 CUL4AQ13619 759 aa15.19■□□□□ 0.02
PPP3CB-204ENST00000394829 HDGFL1Q5TGJ6 251 aa15.19■□□□□ 0.02
PPP3CB-204ENST00000394829 MCM2P49736 904 aa15.19■□□□□ 0.02
PPP3CB-204ENST00000394829 BRD1O95696 1058 aa15.19■□□□□ 0.02
PPP3CB-204ENST00000394829 ABTB2Q8N961 1025 aa15.19■□□□□ 0.02
PPP3CB-204ENST00000394829 SRCIN1Q9C0H9 1055 aa15.19■□□□□ 0.02
PPP3CB-204ENST00000394829 SOS1Q07889 1333 aaPredicted RBP15.18■□□□□ 0.02
PPP3CB-204ENST00000394829 SYCE3A1L190 88 aa15.18■□□□□ 0.02
PPP3CB-204ENST00000394829 ANAPC15P60006 121 aa15.18■□□□□ 0.02
PPP3CB-204ENST00000394829 PPP1R42Q7Z4L9 355 aa15.18■□□□□ 0.02
PPP3CB-204ENST00000394829 SSH3Q8TE77 659 aa15.18■□□□□ 0.02
PPP3CB-204ENST00000394829 EIF2S2P20042 333 aaKnown RBP15.17■□□□□ 0.02
PPP3CB-204ENST00000394829 ZSCAN30Q86W11 494 aa15.17■□□□□ 0.02
PPP3CB-204ENST00000394829 USP54Q70EL1 1684 aa15.17■□□□□ 0.02
PPP3CB-204ENST00000394829 SURF6O75683 361 aaKnown RBP15.17■□□□□ 0.02
PPP3CB-204ENST00000394829 PXDNLA1KZ92 1463 aa15.17■□□□□ 0.02
PPP3CB-204ENST00000394829 FOXD4L6Q3SYB3 417 aaPredicted RBP15.17■□□□□ 0.02
PPP3CB-204ENST00000394829 FOXD4L3Q6VB84 417 aaPredicted RBP15.17■□□□□ 0.02
PPP3CB-204ENST00000394829 C14orf37Q86TY3 774 aa15.16■□□□□ 0.02
PPP3CB-204ENST00000394829 TCHHQ07283 1943 aa15.16■□□□□ 0.02
PPP3CB-204ENST00000394829 LRSAM1Q6UWE0 723 aa15.16■□□□□ 0.02
PPP3CB-204ENST00000394829 STRCQ7RTU9 1775 aa15.15■□□□□ 0.02
PPP3CB-204ENST00000394829 LMTK3Q96Q04 1460 aa15.15■□□□□ 0.02
PPP3CB-204ENST00000394829 NBPF7P0C2Y1 421 aaPredicted RBP15.15■□□□□ 0.02
PPP3CB-204ENST00000394829 INTS4Q96HW7 963 aaKnown RBP15.15■□□□□ 0.02
PPP3CB-204ENST00000394829 PI4K2BQ8TCG2 481 aa15.15■□□□□ 0.02
PPP3CB-204ENST00000394829 SRGAP3O43295 1099 aa15.15■□□□□ 0.02
PPP3CB-204ENST00000394829 HSPA2P54652 639 aa15.15■□□□□ 0.02
PPP3CB-204ENST00000394829 RHPN1Q8TCX5 695 aa15.15■□□□□ 0.02
PPP3CB-204ENST00000394829 LGR6Q9HBX8 967 aa15.15■□□□□ 0.02
PPP3CB-204ENST00000394829 BABAM1Q9NWV8 329 aa15.15■□□□□ 0.02
PPP3CB-204ENST00000394829 AOX1Q06278 1338 aa15.14■□□□□ 0.01
PPP3CB-204ENST00000394829 HSPA4P34932 840 aa15.14■□□□□ 0.01
PPP3CB-204ENST00000394829 POLA2Q14181 598 aa15.14■□□□□ 0.01
PPP3CB-204ENST00000394829 PDLIM2Q96JY6 352 aa15.14■□□□□ 0.01
PPP3CB-204ENST00000394829 LTN1O94822 1766 aa15.14■□□□□ 0.01
PPP3CB-204ENST00000394829 IL17RAQ96F46 866 aa15.14■□□□□ 0.01
PPP3CB-204ENST00000394829 ARID3AQ99856 593 aa15.14■□□□□ 0.01
PPP3CB-204ENST00000394829 GDPD2Q9HCC8 539 aa15.14■□□□□ 0.01
PPP3CB-204ENST00000394829 ANXA1P04083 346 aa15.13■□□□□ 0.01
PPP3CB-204ENST00000394829 MSNP26038 577 aaKnown RBP15.13■□□□□ 0.01
PPP3CB-204ENST00000394829 CHPF2Q9P2E5 772 aa15.13■□□□□ 0.01
PPP3CB-204ENST00000394829 KCNQ3O43525 872 aa15.13■□□□□ 0.01
PPP3CB-204ENST00000394829 RAB11FIP3O75154 756 aa15.13■□□□□ 0.01
PPP3CB-204ENST00000394829 MBD3O95983 291 aa15.12■□□□□ 0.01
PPP3CB-204ENST00000394829 EIF4A1P60842 406 aaKnown RBP15.12■□□□□ 0.01
PPP3CB-204ENST00000394829 PI4KAP2A4QPH2 592 aa15.12■□□□□ 0.01
PPP3CB-204ENST00000394829 NBPF6Q5VWK0 638 aa15.12■□□□□ 0.01
PPP3CB-204ENST00000394829 PI4KAP1Q8N8J0 262 aa15.12■□□□□ 0.01
PPP3CB-204ENST00000394829 RNF214Q8ND24 703 aa15.12■□□□□ 0.01
PPP3CB-204ENST00000394829 NBPF4Q96M43 638 aa15.12■□□□□ 0.01
PPP3CB-204ENST00000394829 CEMIPQ8WUJ3 1361 aa15.12■□□□□ 0.01
PPP3CB-204ENST00000394829 GADD45BO75293 160 aaPredicted RBP15.11■□□□□ 0.01
PPP3CB-204ENST00000394829 BEND3Q5T5X7 828 aa15.11■□□□□ 0.01
PPP3CB-204ENST00000394829 LARP6Q9BRS8 491 aaKnown RBP15.11■□□□□ 0.01
PPP3CB-204ENST00000394829 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.11■□□□□ 0.01
PPP3CB-204ENST00000394829 SGSM2O43147 1006 aa15.11■□□□□ 0.01
PPP3CB-204ENST00000394829 KIF1BPQ96EK5 621 aa15.11■□□□□ 0.01
PPP3CB-204ENST00000394829 DNAAF4Q8WXU2 420 aa15.1■□□□□ 0.01
PPP3CB-204ENST00000394829 SNX14Q9Y5W7 946 aa15.1■□□□□ 0.01
PPP3CB-204ENST00000394829 RAD50Q92878 1312 aa15.1■□□□□ 0.01
PPP3CB-204ENST00000394829 RGPD2P0DJD1 1756 aa15.1■□□□□ 0.01
PPP3CB-204ENST00000394829 XIRP1Q702N8 1843 aaKnown RBP15.1■□□□□ 0.01
PPP3CB-204ENST00000394829 ZBTB7CA1YPR0 619 aa15.1■□□□□ 0.01
PPP3CB-204ENST00000394829 RASEFQ8IZ41 740 aa15.1■□□□□ 0.01
PPP3CB-204ENST00000394829 CWC27Q6UX04 472 aaKnown RBP15.1■□□□□ 0.01
PPP3CB-204ENST00000394829 KIAA1211Q6ZU35 1233 aa15.1■□□□□ 0.01
PPP3CB-204ENST00000394829 PHF8Q9UPP1 1060 aa15.1■□□□□ 0.01
PPP3CB-204ENST00000394829 HS1BP3Q53T59 392 aa15.09■□□□□ 0.01
PPP3CB-204ENST00000394829 LSG1Q9H089 658 aaKnown RBP15.09■□□□□ 0.01
PPP3CB-204ENST00000394829 NOL7Q9UMY1 257 aaKnown RBP15.09■□□□□ 0.01
PPP3CB-204ENST00000394829 USP48Q86UV5 1035 aa15.09■□□□□ 0.01
PPP3CB-204ENST00000394829 PROSER2Q86WR7 435 aaPredicted RBP15.09■□□□□ 0.01
PPP3CB-204ENST00000394829 SPG7Q9UQ90 795 aa15.09■□□□□ 0.01
PPP3CB-204ENST00000394829 KDM3BQ7LBC6 1761 aa15.09■□□□□ 0.01
PPP3CB-204ENST00000394829 RPAP1Q9BWH6 1393 aaPredicted RBP15.08■□□□□ 0.01
PPP3CB-204ENST00000394829 EPB41L2O43491 1005 aaKnown RBP15.08■□□□□ 0.01
PPP3CB-204ENST00000394829 CNTROBQ8N137 903 aa15.08■□□□□ 0.01
PPP3CB-204ENST00000394829 IP6K1Q92551 441 aa15.08■□□□□ 0.01
PPP3CB-204ENST00000394829 OFD1O75665 1012 aa15.08■□□□□ 0
PPP3CB-204ENST00000394829 WDR33Q9C0J8 1336 aaKnown RBP15.08■□□□□ 0
PPP3CB-204ENST00000394829 CPA1P15085 419 aa15.08■□□□□ 0
PPP3CB-204ENST00000394829 AK2P54819 239 aa15.08■□□□□ 0
PPP3CB-204ENST00000394829 TTC14Q96N46 770 aa15.08■□□□□ 0
PPP3CB-204ENST00000394829 MED1Q15648 1581 aaPredicted RBP15.07■□□□□ 0
PPP3CB-204ENST00000394829 ADCY9O60503 1353 aa15.07■□□□□ 0
PPP3CB-204ENST00000394829 MPRIPQ6WCQ1 1025 aa15.07■□□□□ 0
PPP3CB-204ENST00000394829 LRRC59Q96AG4 307 aaKnown RBP15.07■□□□□ 0
PPP3CB-204ENST00000394829 DTNBO60941 627 aa15.07■□□□□ 0
PPP3CB-204ENST00000394829 TRPM3Q9HCF6 1732 aaPredicted RBP15.07■□□□□ 0
PPP3CB-204ENST00000394829 BTBD11A6QL63 1104 aa15.06■□□□□ 0
PPP3CB-204ENST00000394829 TPRNQ4KMQ1 711 aa15.06■□□□□ 0
PPP3CB-204ENST00000394829 ESCO1Q5FWF5 840 aa15.06■□□□□ 0
PPP3CB-204ENST00000394829 XPCQ01831 940 aaPredicted RBP15.06■□□□□ 0
PPP3CB-204ENST00000394829 OS9Q13438 667 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms