RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 NBPF6Q5VWK0 638 aa8.95□□□□□ -0.98
RTN4-205ENST00000394609 MCM10Q7L590 875 aa8.95□□□□□ -0.98
RTN4-205ENST00000394609 LRRC59Q96AG4 307 aaKnown RBP8.95□□□□□ -0.98
RTN4-205ENST00000394609 NBPF4Q96M43 638 aa8.95□□□□□ -0.98
RTN4-205ENST00000394609 NFAT5O94916 1531 aa8.94□□□□□ -0.98
RTN4-205ENST00000394609 RARSP54136 660 aaKnown RBP8.94□□□□□ -0.98
RTN4-205ENST00000394609 CRBNQ96SW2 442 aa8.94□□□□□ -0.98
RTN4-205ENST00000394609 PCDHGA10Q9Y5H3 936 aa8.94□□□□□ -0.98
RTN4-205ENST00000394609 MARF1Q9Y4F3 1742 aaKnown RBP8.94□□□□□ -0.98
RTN4-205ENST00000394609 SPATA31A3Q5VYP0 1347 aa8.94□□□□□ -0.98
RTN4-205ENST00000394609 LMOD3Q0VAK6 560 aa8.94□□□□□ -0.98
RTN4-205ENST00000394609 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.94□□□□□ -0.98
RTN4-205ENST00000394609 FRAT1Q92837 279 aaPredicted RBP8.94□□□□□ -0.98
RTN4-205ENST00000394609 EPAS1Q99814 870 aa8.94□□□□□ -0.98
RTN4-205ENST00000394609 RABGEF1Q9UJ41 708 aa8.94□□□□□ -0.98
RTN4-205ENST00000394609 RTL1A6NKG5 1358 aa8.93□□□□□ -0.98
RTN4-205ENST00000394609 KDRP35968 1356 aa8.93□□□□□ -0.98
RTN4-205ENST00000394609 KIF1AQ12756 1690 aa8.93□□□□□ -0.98
RTN4-205ENST00000394609 CALD1Q05682 793 aaKnown RBP8.93□□□□□ -0.98
RTN4-205ENST00000394609 CCDC136Q96JN2 1154 aa8.93□□□□□ -0.98
RTN4-205ENST00000394609 XIRP1Q702N8 1843 aaKnown RBP8.92□□□□□ -0.98
RTN4-205ENST00000394609 ELL2O00472 640 aaPredicted RBP8.92□□□□□ -0.98
RTN4-205ENST00000394609 CANXP27824 592 aaKnown RBP8.92□□□□□ -0.98
RTN4-205ENST00000394609 CHRNA2Q15822 529 aa8.92□□□□□ -0.98
RTN4-205ENST00000394609 ANKRD24Q8TF21 1146 aa8.92□□□□□ -0.98
RTN4-205ENST00000394609 MBIPQ9NS73 344 aa8.92□□□□□ -0.98
RTN4-205ENST00000394609 IFT57Q9NWB7 429 aa8.92□□□□□ -0.98
RTN4-205ENST00000394609 TNS3Q68CZ2 1445 aa8.92□□□□□ -0.98
RTN4-205ENST00000394609 PXDNQ92626 1479 aa8.92□□□□□ -0.98
RTN4-205ENST00000394609 TRPM3Q9HCF6 1732 aaPredicted RBP8.92□□□□□ -0.98
RTN4-205ENST00000394609 ONECUT3O60422 494 aaPredicted RBP8.91□□□□□ -0.98
RTN4-205ENST00000394609 ZNF853P0CG23 659 aa8.91□□□□□ -0.98
RTN4-205ENST00000394609 DEKP35659 375 aaKnown RBP8.91□□□□□ -0.98
RTN4-205ENST00000394609 GNAI1P63096 354 aa8.91□□□□□ -0.98
RTN4-205ENST00000394609 PLCB2Q00722 1185 aa8.91□□□□□ -0.98
RTN4-205ENST00000394609 LAPTM4BQ86VI4 370 aa8.91□□□□□ -0.98
RTN4-205ENST00000394609 ANKK1Q8NFD2 765 aa8.91□□□□□ -0.98
RTN4-205ENST00000394609 RTF1Q92541 710 aaKnown RBP8.91□□□□□ -0.98
RTN4-205ENST00000394609 CFAP44Q96MT7 982 aa8.91□□□□□ -0.98
RTN4-205ENST00000394609 SLIT3O75094 1523 aa8.91□□□□□ -0.98
RTN4-205ENST00000394609 USP54Q70EL1 1684 aa8.91□□□□□ -0.98
RTN4-205ENST00000394609 CAMK2BQ13554 666 aa8.91□□□□□ -0.98
RTN4-205ENST00000394609 TSPYL6Q8N831 410 aa8.91□□□□□ -0.98
RTN4-205ENST00000394609 GAS2L2Q8NHY3 880 aa8.91□□□□□ -0.98
RTN4-205ENST00000394609 MIS18AQ9NYP9 233 aa8.91□□□□□ -0.98
RTN4-205ENST00000394609 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.91□□□□□ -0.98
RTN4-205ENST00000394609 MED1Q15648 1581 aaPredicted RBP8.91□□□□□ -0.98
RTN4-205ENST00000394609 RGPD1P0DJD0 1748 aa8.91□□□□□ -0.98
RTN4-205ENST00000394609 SOS2Q07890 1332 aaPredicted RBP8.91□□□□□ -0.98
RTN4-205ENST00000394609 PANK1Q8TE04 598 aa8.9□□□□□ -0.98
RTN4-205ENST00000394609 SSH1Q8WYL5 1049 aa8.9□□□□□ -0.98
RTN4-205ENST00000394609 SMC4Q9NTJ3 1288 aa8.9□□□□□ -0.98
RTN4-205ENST00000394609 PRKCSHP14314 528 aaPredicted RBP8.89□□□□□ -0.99
RTN4-205ENST00000394609 HAP1P54257 671 aaPredicted RBP8.89□□□□□ -0.99
RTN4-205ENST00000394609 C8orf58Q8NAV2 365 aa8.89□□□□□ -0.99
RTN4-205ENST00000394609 CLUAP1Q96AJ1 413 aa8.89□□□□□ -0.99
RTN4-205ENST00000394609 TNNQ9UQP3 1299 aa8.89□□□□□ -0.99
RTN4-205ENST00000394609 NOP58Q9Y2X3 529 aaKnown RBP8.89□□□□□ -0.99
RTN4-205ENST00000394609 KIAA0232Q92628 1395 aa8.89□□□□□ -0.99
RTN4-205ENST00000394609 GNAT3A8MTJ3 354 aa8.89□□□□□ -0.99
RTN4-205ENST00000394609 TCERG1O14776 1098 aaKnown RBP8.89□□□□□ -0.99
RTN4-205ENST00000394609 CT47B1P0C2W7 299 aaPredicted RBP8.89□□□□□ -0.99
RTN4-205ENST00000394609 CSB-PGBD3P0DP91 1061 aa8.89□□□□□ -0.99
RTN4-205ENST00000394609 KRT24Q2M2I5 525 aa8.89□□□□□ -0.99
RTN4-205ENST00000394609 NLRP2Q9NX02 1062 aa8.89□□□□□ -0.99
RTN4-205ENST00000394609 ALS2Q96Q42 1657 aa8.88□□□□□ -0.99
RTN4-205ENST00000394609 CHL1O00533 1208 aa8.88□□□□□ -0.99
RTN4-205ENST00000394609 VAMP4O75379 141 aa8.88□□□□□ -0.99
RTN4-205ENST00000394609 RLBP1P12271 317 aa8.88□□□□□ -0.99
RTN4-205ENST00000394609 IL17REQ8NFR9 667 aa8.88□□□□□ -0.99
RTN4-205ENST00000394609 COG6Q9Y2V7 657 aa8.88□□□□□ -0.99
RTN4-205ENST00000394609 LTN1O94822 1766 aa8.88□□□□□ -0.99
RTN4-205ENST00000394609 PDE3AQ14432 1141 aa8.87□□□□□ -0.99
RTN4-205ENST00000394609 TWISTNBQ3B726 338 aaPredicted RBP8.87□□□□□ -0.99
RTN4-205ENST00000394609 PRDM11Q9NQV5 511 aa8.87□□□□□ -0.99
RTN4-205ENST00000394609 NOB1Q9ULX3 412 aaKnown RBP8.87□□□□□ -0.99
RTN4-205ENST00000394609 A0A0G2JS52 829 aa8.87□□□□□ -0.99
RTN4-205ENST00000394609 COL9A1P20849 921 aa8.87□□□□□ -0.99
RTN4-205ENST00000394609 NYAP1Q6ZVC0 841 aa8.87□□□□□ -0.99
RTN4-205ENST00000394609 TSPYL4Q9UJ04 414 aa8.87□□□□□ -0.99
RTN4-205ENST00000394609 CRB1P82279 1406 aa8.86□□□□□ -0.99
RTN4-205ENST00000394609 HTATSF1O43719 755 aaKnown RBP8.86□□□□□ -0.99
RTN4-205ENST00000394609 PLEKHO1Q53GL0 409 aaPredicted RBP8.86□□□□□ -0.99
RTN4-205ENST00000394609 ZKSCAN2Q63HK3 967 aa8.86□□□□□ -0.99
RTN4-205ENST00000394609 ZNF530Q6P9A1 599 aaPredicted RBP8.86□□□□□ -0.99
RTN4-205ENST00000394609 MAP3K5Q99683 1374 aa8.86□□□□□ -0.99
RTN4-205ENST00000394609 PROX2Q3B8N5 592 aa8.85□□□□□ -0.99
RTN4-205ENST00000394609 MPRIPQ6WCQ1 1025 aa8.85□□□□□ -0.99
RTN4-205ENST00000394609 LGR6Q9HBX8 967 aa8.85□□□□□ -0.99
RTN4-205ENST00000394609 TRIM27P14373 513 aa8.85□□□□□ -0.99
RTN4-205ENST00000394609 PIP4K2BP78356 416 aa8.85□□□□□ -0.99
RTN4-205ENST00000394609 ALDH1L2Q3SY69 923 aa8.85□□□□□ -0.99
RTN4-205ENST00000394609 AMOTQ4VCS5 1084 aa8.85□□□□□ -0.99
RTN4-205ENST00000394609 C6orf132Q5T0Z8 1188 aa8.85□□□□□ -0.99
RTN4-205ENST00000394609 FTSJ3Q8IY81 847 aaKnown RBP8.85□□□□□ -0.99
RTN4-205ENST00000394609 RAPGEF4Q8WZA2 1011 aa8.85□□□□□ -0.99
RTN4-205ENST00000394609 USP35Q9P2H5 1018 aa8.85□□□□□ -0.99
RTN4-205ENST00000394609 CPDO75976 1380 aa8.85□□□□□ -0.99
RTN4-205ENST00000394609 DLG5Q8TDM6 1919 aa8.84□□□□□ -0.99
RTN4-205ENST00000394609 DPYSL4O14531 572 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms