RNA–Protein interactions for RNA: ENST00000394576.2

PCDHGA2-201, Transcript of protocadherin gamma subfamily A, 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA2, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2-201ENST00000394576 ANKRD13DQ6ZTN6 518 aa13.04□□□□□ -0.32
PCDHGA2-201ENST00000394576 NFATC2IPQ8NCF5 419 aa13.04□□□□□ -0.32
PCDHGA2-201ENST00000394576 TOMM22Q9NS69 142 aa13.04□□□□□ -0.32
PCDHGA2-201ENST00000394576 KLHL34Q8N239 644 aa13.04□□□□□ -0.32
PCDHGA2-201ENST00000394576 AKAP2Q9Y2D5 859 aa13.04□□□□□ -0.32
PCDHGA2-201ENST00000394576 ATP6V1AP38606 617 aa13.03□□□□□ -0.32
PCDHGA2-201ENST00000394576 SF3A1Q15459 793 aaKnown RBP13.03□□□□□ -0.32
PCDHGA2-201ENST00000394576 ANO2Q9NQ90 1003 aa13.03□□□□□ -0.32
PCDHGA2-201ENST00000394576 CWC25Q9NXE8 425 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA2-201ENST00000394576 TSPYL6Q8N831 410 aa13.03□□□□□ -0.32
PCDHGA2-201ENST00000394576 TECPR2O15040 1411 aa13.03□□□□□ -0.32
PCDHGA2-201ENST00000394576 FAM184AQ8NB25 1140 aa13.03□□□□□ -0.32
PCDHGA2-201ENST00000394576 TRIM34Q9BYJ4 488 aa13.03□□□□□ -0.32
PCDHGA2-201ENST00000394576 TRMT112Q9UI30 125 aaKnown RBP13.03□□□□□ -0.32
PCDHGA2-201ENST00000394576 TRPC5Q9UL62 973 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA2-201ENST00000394576 H3BQV1 296 aa13.03□□□□□ -0.32
PCDHGA2-201ENST00000394576 IFFO2Q5TF58 517 aa13.03□□□□□ -0.32
PCDHGA2-201ENST00000394576 RFC4P35249 363 aa13.02□□□□□ -0.32
PCDHGA2-201ENST00000394576 TRDNQ13061 729 aa13.02□□□□□ -0.32
PCDHGA2-201ENST00000394576 ZSCAN25Q6NSZ9 544 aa13.02□□□□□ -0.33
PCDHGA2-201ENST00000394576 BCL11BQ9C0K0 894 aaPredicted RBP13.02□□□□□ -0.33
PCDHGA2-201ENST00000394576 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.02□□□□□ -0.33
PCDHGA2-201ENST00000394576 CDC42BPGQ6DT37 1551 aa13.02□□□□□ -0.33
PCDHGA2-201ENST00000394576 CPLX2Q6PUV4 134 aaKnown RBP13.02□□□□□ -0.33
PCDHGA2-201ENST00000394576 SYNE3Q6ZMZ3 975 aa13.02□□□□□ -0.33
PCDHGA2-201ENST00000394576 KIF1BPQ96EK5 621 aa13.02□□□□□ -0.33
PCDHGA2-201ENST00000394576 KIAA0232Q92628 1395 aa13.02□□□□□ -0.33
PCDHGA2-201ENST00000394576 KSR2Q6VAB6 950 aa13.01□□□□□ -0.33
PCDHGA2-201ENST00000394576 TTC39AQ5SRH9 613 aa13.01□□□□□ -0.33
PCDHGA2-201ENST00000394576 MAP3K2Q9Y2U5 619 aa13.01□□□□□ -0.33
PCDHGA2-201ENST00000394576 USP31Q70CQ4 1352 aa13.01□□□□□ -0.33
PCDHGA2-201ENST00000394576 ZNF772Q68DY9 489 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA2-201ENST00000394576 WDR17Q8IZU2 1322 aa13.01□□□□□ -0.33
PCDHGA2-201ENST00000394576 ACSBG1Q96GR2 724 aa13.01□□□□□ -0.33
PCDHGA2-201ENST00000394576 SLC52A2Q9HAB3 445 aa13.01□□□□□ -0.33
PCDHGA2-201ENST00000394576 ANO8Q9HCE9 1232 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA2-201ENST00000394576 CHL1O00533 1208 aa13□□□□□ -0.33
PCDHGA2-201ENST00000394576 APPP05067 770 aa13□□□□□ -0.33
PCDHGA2-201ENST00000394576 IFIT5Q13325 482 aaKnown RBP13□□□□□ -0.33
PCDHGA2-201ENST00000394576 BICDL1Q6ZP65 573 aa13□□□□□ -0.33
PCDHGA2-201ENST00000394576 FSD1Q9BTV5 496 aa13□□□□□ -0.33
PCDHGA2-201ENST00000394576 IGSF1Q8N6C5 1336 aa13□□□□□ -0.33
PCDHGA2-201ENST00000394576 PI4KAP2A4QPH2 592 aa13□□□□□ -0.33
PCDHGA2-201ENST00000394576 PI4KAP1Q8N8J0 262 aa13□□□□□ -0.33
PCDHGA2-201ENST00000394576 CDK12Q9NYV4 1490 aaPredicted RBP13□□□□□ -0.33
PCDHGA2-201ENST00000394576 SLC39A6Q13433 755 aa13□□□□□ -0.33
PCDHGA2-201ENST00000394576 ZNF790Q6PG37 636 aa13□□□□□ -0.33
PCDHGA2-201ENST00000394576 SIGLEC1Q9BZZ2 1709 aa13□□□□□ -0.33
PCDHGA2-201ENST00000394576 IFT172Q9UG01 1749 aa13□□□□□ -0.33
PCDHGA2-201ENST00000394576 FBXW7Q969H0 707 aa13□□□□□ -0.33
PCDHGA2-201ENST00000394576 THRAP3Q9Y2W1 955 aaKnown RBP13□□□□□ -0.33
PCDHGA2-201ENST00000394576 DDX21Q9NR30 783 aaKnown RBP eCLIP12.99□□□□□ -0.33
PCDHGA2-201ENST00000394576 C1orf167Q5SNV9 1468 aa12.99□□□□□ -0.33
PCDHGA2-201ENST00000394576 TNS3Q68CZ2 1445 aa12.99□□□□□ -0.33
PCDHGA2-201ENST00000394576 VAMP4O75379 141 aa12.99□□□□□ -0.33
PCDHGA2-201ENST00000394576 WASHC4Q2M389 1173 aa12.99□□□□□ -0.33
PCDHGA2-201ENST00000394576 NBPF14Q5TI25 921 aa12.99□□□□□ -0.33
PCDHGA2-201ENST00000394576 ZBTB3Q9H5J0 574 aa12.99□□□□□ -0.33
PCDHGA2-201ENST00000394576 MED14O60244 1454 aa12.99□□□□□ -0.33
PCDHGA2-201ENST00000394576 ANKRD18BA2A2Z9 1011 aa12.99□□□□□ -0.33
PCDHGA2-201ENST00000394576 MRPL50Q8N5N7 158 aaKnown RBP12.99□□□□□ -0.33
PCDHGA2-201ENST00000394576 C8orf58Q8NAV2 365 aa12.99□□□□□ -0.33
PCDHGA2-201ENST00000394576 CERKQ8TCT0 537 aa12.99□□□□□ -0.33
PCDHGA2-201ENST00000394576 CDC5LQ99459 802 aaKnown RBP12.99□□□□□ -0.33
PCDHGA2-201ENST00000394576 MYO3AQ8NEV4 1616 aa12.99□□□□□ -0.33
PCDHGA2-201ENST00000394576 XAGE3Q8WTP9 111 aa12.98□□□□□ -0.33
PCDHGA2-201ENST00000394576 CHPF2Q9P2E5 772 aa12.98□□□□□ -0.33
PCDHGA2-201ENST00000394576 RTCBQ9Y3I0 505 aaKnown RBP12.98□□□□□ -0.33
PCDHGA2-201ENST00000394576 CHD1LQ86WJ1 897 aa12.98□□□□□ -0.33
PCDHGA2-201ENST00000394576 LINS1Q8NG48 757 aa12.98□□□□□ -0.33
PCDHGA2-201ENST00000394576 IFIT1P09914 478 aaKnown RBP12.98□□□□□ -0.33
PCDHGA2-201ENST00000394576 COPS6Q7L5N1 327 aa12.98□□□□□ -0.33
PCDHGA2-201ENST00000394576 FAM98CQ17RN3 349 aaKnown RBP12.98□□□□□ -0.33
PCDHGA2-201ENST00000394576 TMEM131LA2VDJ0 1609 aa12.97□□□□□ -0.33
PCDHGA2-201ENST00000394576 F6X3S4 739 aa12.97□□□□□ -0.33
PCDHGA2-201ENST00000394576 NYXQ9GZU5 481 aa12.97□□□□□ -0.33
PCDHGA2-201ENST00000394576 SLIT1O75093 1534 aa12.97□□□□□ -0.33
PCDHGA2-201ENST00000394576 GOLGA6L19H0YKK7 550 aa12.97□□□□□ -0.33
PCDHGA2-201ENST00000394576 CLSTN1O94985 981 aa12.97□□□□□ -0.33
PCDHGA2-201ENST00000394576 DCCP43146 1447 aa12.97□□□□□ -0.33
PCDHGA2-201ENST00000394576 ERBB3P21860 1342 aa12.97□□□□□ -0.33
PCDHGA2-201ENST00000394576 KRT24Q2M2I5 525 aa12.97□□□□□ -0.33
PCDHGA2-201ENST00000394576 PHKG2P15735 406 aa12.97□□□□□ -0.33
PCDHGA2-201ENST00000394576 SIL1Q9H173 461 aa12.97□□□□□ -0.33
PCDHGA2-201ENST00000394576 ZBTB40Q9NUA8 1239 aa12.97□□□□□ -0.33
PCDHGA2-201ENST00000394576 SMC3Q9UQE7 1217 aa12.97□□□□□ -0.33
PCDHGA2-201ENST00000394576 MCM2P49736 904 aa12.96□□□□□ -0.33
PCDHGA2-201ENST00000394576 MRE11P49959 708 aa12.96□□□□□ -0.33
PCDHGA2-201ENST00000394576 METTL24Q5JXM2 366 aa12.96□□□□□ -0.33
PCDHGA2-201ENST00000394576 AACSQ86V21 672 aa12.96□□□□□ -0.33
PCDHGA2-201ENST00000394576 RPGRQ92834 1020 aaKnown RBP12.96□□□□□ -0.33
PCDHGA2-201ENST00000394576 BECN2A8MW95 431 aa12.96□□□□□ -0.33
PCDHGA2-201ENST00000394576 ST5P78524 1137 aa12.96□□□□□ -0.33
PCDHGA2-201ENST00000394576 IQSEC2Q5JU85 1478 aa12.96□□□□□ -0.33
PCDHGA2-201ENST00000394576 RABEP1Q15276 862 aa12.96□□□□□ -0.34
PCDHGA2-201ENST00000394576 FOXD4L6Q3SYB3 417 aaPredicted RBP12.96□□□□□ -0.34
PCDHGA2-201ENST00000394576 FOXD4L3Q6VB84 417 aaPredicted RBP12.96□□□□□ -0.34
PCDHGA2-201ENST00000394576 SETDB2Q96T68 719 aa12.96□□□□□ -0.34
PCDHGA2-201ENST00000394576 SLC3A2P08195 630 aaKnown RBP12.95□□□□□ -0.34
PCDHGA2-201ENST00000394576 PSMA5P28066 241 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms