RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 TULP2O00295 520 aa22.66■■□□□ 1.22
HOXC6-202ENST00000394331 TERF2Q15554 542 aa22.66■■□□□ 1.22
HOXC6-202ENST00000394331 TSPYL1Q9H0U9 437 aa22.66■■□□□ 1.22
HOXC6-202ENST00000394331 RGS12O14924 1447 aa22.66■■□□□ 1.22
HOXC6-202ENST00000394331 CRB1P82279 1406 aa22.66■■□□□ 1.22
HOXC6-202ENST00000394331 RGPD1P0DJD0 1748 aa22.66■■□□□ 1.22
HOXC6-202ENST00000394331 KDM4AO75164 1064 aa22.66■■□□□ 1.22
HOXC6-202ENST00000394331 TTC22Q5TAA0 569 aa22.66■■□□□ 1.22
HOXC6-202ENST00000394331 RTF1Q92541 710 aaKnown RBP22.66■■□□□ 1.22
HOXC6-202ENST00000394331 SBNO1A3KN83 1393 aa22.66■■□□□ 1.22
HOXC6-202ENST00000394331 FLT4P35916 1363 aa22.66■■□□□ 1.22
HOXC6-202ENST00000394331 PLEKHM2Q8IWE5 1019 aa22.65■■□□□ 1.22
HOXC6-202ENST00000394331 TMEM87AQ8NBN3 555 aa22.65■■□□□ 1.22
HOXC6-202ENST00000394331 PEAK1Q9H792 1746 aa22.65■■□□□ 1.22
HOXC6-202ENST00000394331 IGSF3O75054 1194 aa22.64■■□□□ 1.22
HOXC6-202ENST00000394331 KCNJ4P48050 445 aa22.64■■□□□ 1.22
HOXC6-202ENST00000394331 SOX12O15370 315 aa22.64■■□□□ 1.21
HOXC6-202ENST00000394331 CUL4AQ13619 759 aa22.64■■□□□ 1.21
HOXC6-202ENST00000394331 CCDC183Q5T5S1 534 aa22.64■■□□□ 1.21
HOXC6-202ENST00000394331 INTS4Q96HW7 963 aaKnown RBP22.64■■□□□ 1.21
HOXC6-202ENST00000394331 CALCOCO1Q9P1Z2 691 aa22.64■■□□□ 1.21
HOXC6-202ENST00000394331 NGDNQ8NEJ9 315 aaKnown RBP22.64■■□□□ 1.21
HOXC6-202ENST00000394331 ATP10DQ9P241 1426 aa22.63■■□□□ 1.21
HOXC6-202ENST00000394331 ZBTB22O15209 634 aa22.63■■□□□ 1.21
HOXC6-202ENST00000394331 CEP85Q6P2H3 762 aa22.63■■□□□ 1.21
HOXC6-202ENST00000394331 CASC1Q6TDU7 716 aa22.63■■□□□ 1.21
HOXC6-202ENST00000394331 SLIT1O75093 1534 aa22.62■■□□□ 1.21
HOXC6-202ENST00000394331 SMTNL1A8MU46 457 aa22.62■■□□□ 1.21
HOXC6-202ENST00000394331 CEBPAP49715 358 aaPredicted RBP22.62■■□□□ 1.21
HOXC6-202ENST00000394331 ARHGAP23Q9P227 1491 aa22.62■■□□□ 1.21
HOXC6-202ENST00000394331 KDRP35968 1356 aa22.62■■□□□ 1.21
HOXC6-202ENST00000394331 ZBTB7CA1YPR0 619 aa22.61■■□□□ 1.21
HOXC6-202ENST00000394331 GOLGA6L6A8MZA4 724 aa22.61■■□□□ 1.21
HOXC6-202ENST00000394331 REC8O95072 547 aa22.61■■□□□ 1.21
HOXC6-202ENST00000394331 SLC4A2P04920 1241 aa22.61■■□□□ 1.21
HOXC6-202ENST00000394331 MTHFSDQ2M296 383 aaKnown RBP22.61■■□□□ 1.21
HOXC6-202ENST00000394331 KCNF1Q9H3M0 494 aa22.61■■□□□ 1.21
HOXC6-202ENST00000394331 AMPHP49418 695 aa22.61■■□□□ 1.21
HOXC6-202ENST00000394331 RTL1A6NKG5 1358 aa22.61■■□□□ 1.21
HOXC6-202ENST00000394331 FAM53CQ9NYF3 392 aa22.61■■□□□ 1.21
HOXC6-202ENST00000394331 TSPYL4Q9UJ04 414 aa22.61■■□□□ 1.21
HOXC6-202ENST00000394331 KRT222Q8N1A0 295 aa22.6■■□□□ 1.21
HOXC6-202ENST00000394331 KIF18AQ8NI77 898 aa22.6■■□□□ 1.21
HOXC6-202ENST00000394331 MSH6P52701 1360 aa22.59■■□□□ 1.21
HOXC6-202ENST00000394331 CHAMP1Q96JM3 812 aa22.59■■□□□ 1.21
HOXC6-202ENST00000394331 PYCARDQ9ULZ3 195 aa22.59■■□□□ 1.21
HOXC6-202ENST00000394331 IGSF1Q8N6C5 1336 aa22.59■■□□□ 1.21
HOXC6-202ENST00000394331 HTATSF1O43719 755 aaKnown RBP22.58■■□□□ 1.21
HOXC6-202ENST00000394331 THEMISQ8N1K5 641 aaPredicted RBP22.58■■□□□ 1.21
HOXC6-202ENST00000394331 HMMRO75330 724 aa22.58■■□□□ 1.21
HOXC6-202ENST00000394331 MX1P20591 662 aa22.58■■□□□ 1.21
HOXC6-202ENST00000394331 TMX3Q96JJ7 454 aa22.58■■□□□ 1.21
HOXC6-202ENST00000394331 CCT4P50991 539 aaKnown RBP22.58■■□□□ 1.2
HOXC6-202ENST00000394331 MEIS3Q99687 375 aa22.58■■□□□ 1.2
HOXC6-202ENST00000394331 FOXO3O43524 673 aa22.57■■□□□ 1.2
HOXC6-202ENST00000394331 EYA1Q99502 592 aa22.57■■□□□ 1.2
HOXC6-202ENST00000394331 PAXBP1Q9Y5B6 917 aa22.57■■□□□ 1.2
HOXC6-202ENST00000394331 MIS18AQ9NYP9 233 aa22.56■■□□□ 1.2
HOXC6-202ENST00000394331 AEBP2Q6ZN18 517 aaPredicted RBP22.56■■□□□ 1.2
HOXC6-202ENST00000394331 DIP2AQ14689 1571 aa22.56■■□□□ 1.2
HOXC6-202ENST00000394331 FUCA2Q9BTY2 467 aa22.55■■□□□ 1.2
HOXC6-202ENST00000394331 C16orf71Q8IYS4 520 aaPredicted RBP22.54■■□□□ 1.2
HOXC6-202ENST00000394331 MPNDQ8N594 471 aa22.54■■□□□ 1.2
HOXC6-202ENST00000394331 HCLS1P14317 486 aaPredicted RBP22.54■■□□□ 1.2
HOXC6-202ENST00000394331 ANKARQ7Z5J8 1434 aa22.54■■□□□ 1.2
HOXC6-202ENST00000394331 USP48Q86UV5 1035 aa22.54■■□□□ 1.2
HOXC6-202ENST00000394331 STK31Q9BXU1 1019 aa22.54■■□□□ 1.2
HOXC6-202ENST00000394331 GADD45BO75293 160 aaPredicted RBP22.53■■□□□ 1.2
HOXC6-202ENST00000394331 NLRP6P59044 892 aa22.53■■□□□ 1.2
HOXC6-202ENST00000394331 WDR33Q9C0J8 1336 aaKnown RBP22.53■■□□□ 1.2
HOXC6-202ENST00000394331 FMN2Q9NZ56 1722 aa22.52■■□□□ 1.2
HOXC6-202ENST00000394331 IL17RAQ96F46 866 aa22.52■■□□□ 1.2
HOXC6-202ENST00000394331 ZNF397Q8NF99 534 aaPredicted RBP22.52■■□□□ 1.2
HOXC6-202ENST00000394331 RPAP1Q9BWH6 1393 aaPredicted RBP22.52■■□□□ 1.2
HOXC6-202ENST00000394331 ERC2O15083 957 aa22.51■■□□□ 1.19
HOXC6-202ENST00000394331 PLPPR3Q6T4P5 718 aa22.51■■□□□ 1.19
HOXC6-202ENST00000394331 SLC4A10Q6U841 1118 aa22.51■■□□□ 1.19
HOXC6-202ENST00000394331 G2E3Q7L622 706 aa22.51■■□□□ 1.19
HOXC6-202ENST00000394331 PLCD3Q8N3E9 789 aa22.51■■□□□ 1.19
HOXC6-202ENST00000394331 SOS1Q07889 1333 aaPredicted RBP22.51■■□□□ 1.19
HOXC6-202ENST00000394331 CAPN2P17655 700 aa22.5■■□□□ 1.19
HOXC6-202ENST00000394331 CEP170BQ9Y4F5 1589 aaPredicted RBP22.5■■□□□ 1.19
HOXC6-202ENST00000394331 GNAT3A8MTJ3 354 aa22.5■■□□□ 1.19
HOXC6-202ENST00000394331 SDSP20132 328 aa22.5■■□□□ 1.19
HOXC6-202ENST00000394331 SLFNL1Q499Z3 407 aa22.5■■□□□ 1.19
HOXC6-202ENST00000394331 OTUD7AQ8TE49 926 aaPredicted RBP22.5■■□□□ 1.19
HOXC6-202ENST00000394331 UBE2HP62256 183 aa22.49■■□□□ 1.19
HOXC6-202ENST00000394331 CCDC30Q5VVM6 783 aa22.49■■□□□ 1.19
HOXC6-202ENST00000394331 GNAI2P04899 355 aa22.49■■□□□ 1.19
HOXC6-202ENST00000394331 SMARCA5O60264 1052 aaPredicted RBP22.48■■□□□ 1.19
HOXC6-202ENST00000394331 ANAPC15P60006 121 aa22.48■■□□□ 1.19
HOXC6-202ENST00000394331 FOXD4L5Q5VV16 416 aaPredicted RBP22.48■■□□□ 1.19
HOXC6-202ENST00000394331 FOXD4L4Q8WXT5 416 aaPredicted RBP22.48■■□□□ 1.19
HOXC6-202ENST00000394331 BABAM1Q9NWV8 329 aa22.48■■□□□ 1.19
HOXC6-202ENST00000394331 F6X3S4 739 aa22.48■■□□□ 1.19
HOXC6-202ENST00000394331 HOXC9P31274 260 aa22.48■■□□□ 1.19
HOXC6-202ENST00000394331 PIK3C2AO00443 1686 aa22.48■■□□□ 1.19
HOXC6-202ENST00000394331 APBB1O00213 710 aa22.47■■□□□ 1.19
HOXC6-202ENST00000394331 CCDC112Q8NEF3 446 aa22.47■■□□□ 1.19
HOXC6-202ENST00000394331 NEK4P51957 841 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms