RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 AFF2P51816 1311 aa25.74■■□□□ 1.71
HDDC3-202ENST00000394272 MARCH10Q8NA82 808 aaPredicted RBP25.73■■□□□ 1.71
HDDC3-202ENST00000394272 THSD7AQ9UPZ6 1657 aa25.73■■□□□ 1.71
HDDC3-202ENST00000394272 CENPQQ7L2Z9 268 aaPredicted RBP25.72■■□□□ 1.71
HDDC3-202ENST00000394272 CHMP4BQ9H444 224 aaKnown RBP25.72■■□□□ 1.71
HDDC3-202ENST00000394272 F6X3S4 739 aa25.72■■□□□ 1.71
HDDC3-202ENST00000394272 ANXA1P04083 346 aa25.71■■□□□ 1.71
HDDC3-202ENST00000394272 PDIA6Q15084 440 aa25.71■■□□□ 1.71
HDDC3-202ENST00000394272 PROSER3Q2NL68 480 aa25.71■■□□□ 1.71
HDDC3-202ENST00000394272 DDX21Q9NR30 783 aaKnown RBP eCLIP25.71■■□□□ 1.71
HDDC3-202ENST00000394272 USP16Q9Y5T5 823 aa25.71■■□□□ 1.71
HDDC3-202ENST00000394272 PXDNLA1KZ92 1463 aa25.71■■□□□ 1.71
HDDC3-202ENST00000394272 ATRNO75882 1429 aa25.69■■□□□ 1.7
HDDC3-202ENST00000394272 IGHDP01880 384 aa25.69■■□□□ 1.7
HDDC3-202ENST00000394272 HYPKQ9NX55 129 aa25.69■■□□□ 1.7
HDDC3-202ENST00000394272 CCT4P50991 539 aaKnown RBP25.68■■□□□ 1.7
HDDC3-202ENST00000394272 GJD4Q96KN9 370 aaPredicted RBP25.68■■□□□ 1.7
HDDC3-202ENST00000394272 ATG3Q9NT62 314 aa25.68■■□□□ 1.7
HDDC3-202ENST00000394272 ASAP1Q9ULH1 1129 aa25.68■■□□□ 1.7
HDDC3-202ENST00000394272 SLC4A10Q6U841 1118 aa25.66■■□□□ 1.7
HDDC3-202ENST00000394272 PTCD1O75127 700 aaKnown RBP25.66■■□□□ 1.7
HDDC3-202ENST00000394272 PRIM1P49642 420 aaKnown RBP25.66■■□□□ 1.7
HDDC3-202ENST00000394272 TRPC5Q9UL62 973 aaPredicted RBP25.65■■□□□ 1.7
HDDC3-202ENST00000394272 LRP10Q7Z4F1 713 aa25.64■■□□□ 1.7
HDDC3-202ENST00000394272 ADCY9O60503 1353 aa25.64■■□□□ 1.69
HDDC3-202ENST00000394272 ERBB4Q15303 1308 aa25.64■■□□□ 1.69
HDDC3-202ENST00000394272 VSIG10Q8N0Z9 540 aa25.63■■□□□ 1.69
HDDC3-202ENST00000394272 SYTL4Q96C24 671 aaPredicted RBP25.63■■□□□ 1.69
HDDC3-202ENST00000394272 PI4KAP2A4QPH2 592 aa25.62■■□□□ 1.69
HDDC3-202ENST00000394272 HDAC1Q13547 482 aaPredicted RBP25.62■■□□□ 1.69
HDDC3-202ENST00000394272 PI4KAP1Q8N8J0 262 aa25.62■■□□□ 1.69
HDDC3-202ENST00000394272 DNAAF4Q8WXU2 420 aa25.62■■□□□ 1.69
HDDC3-202ENST00000394272 RWDD1Q9H446 243 aaPredicted RBP25.62■■□□□ 1.69
HDDC3-202ENST00000394272 ONECUT3O60422 494 aaPredicted RBP25.61■■□□□ 1.69
HDDC3-202ENST00000394272 ATP10DQ9P241 1426 aa25.6■■□□□ 1.69
HDDC3-202ENST00000394272 MEIS3Q99687 375 aa25.6■■□□□ 1.69
HDDC3-202ENST00000394272 MYL6BP14649 208 aa25.6■■□□□ 1.69
HDDC3-202ENST00000394272 KSR2Q6VAB6 950 aa25.6■■□□□ 1.69
HDDC3-202ENST00000394272 ACSBG1Q96GR2 724 aa25.6■■□□□ 1.69
HDDC3-202ENST00000394272 C1orf115Q9H7X2 142 aa25.6■■□□□ 1.69
HDDC3-202ENST00000394272 A0A0G2JS52 829 aa25.58■■□□□ 1.69
HDDC3-202ENST00000394272 MYT1Q01538 1121 aa25.58■■□□□ 1.69
HDDC3-202ENST00000394272 NBPF26B4DH59 902 aa25.57■■□□□ 1.68
HDDC3-202ENST00000394272 NBPF14Q5TI25 921 aa25.57■■□□□ 1.68
HDDC3-202ENST00000394272 NBPF10Q6P3W6 841 aaKnown RBP25.57■■□□□ 1.68
HDDC3-202ENST00000394272 NBPF15Q8N660 670 aa25.57■■□□□ 1.68
HDDC3-202ENST00000394272 TEX13AQ9BXU3 409 aaPredicted RBP25.57■■□□□ 1.68
HDDC3-202ENST00000394272 DDX58O95786 925 aaKnown RBP25.57■■□□□ 1.68
HDDC3-202ENST00000394272 PIP4K2AP48426 406 aaPredicted RBP25.57■■□□□ 1.68
HDDC3-202ENST00000394272 BEND3Q5T5X7 828 aa25.57■■□□□ 1.68
HDDC3-202ENST00000394272 XAGE3Q8WTP9 111 aa25.57■■□□□ 1.68
HDDC3-202ENST00000394272 MAP3K2Q9Y2U5 619 aa25.57■■□□□ 1.68
HDDC3-202ENST00000394272 COPS6Q7L5N1 327 aa25.56■■□□□ 1.68
HDDC3-202ENST00000394272 SLC4A9Q96Q91 983 aa25.56■■□□□ 1.68
HDDC3-202ENST00000394272 RBM42Q9BTD8 480 aaKnown RBP25.56■■□□□ 1.68
HDDC3-202ENST00000394272 SRCIN1Q9C0H9 1055 aa25.56■■□□□ 1.68
HDDC3-202ENST00000394272 QTRT2Q9H974 415 aaKnown RBP25.56■■□□□ 1.68
HDDC3-202ENST00000394272 AIMP1Q12904 312 aaKnown RBP25.55■■□□□ 1.68
HDDC3-202ENST00000394272 TJP1Q07157 1748 aa25.55■■□□□ 1.68
HDDC3-202ENST00000394272 DNAJC10Q8IXB1 793 aa25.55■■□□□ 1.68
HDDC3-202ENST00000394272 A1BGP04217 495 aa25.54■■□□□ 1.68
HDDC3-202ENST00000394272 SIRT2Q8IXJ6 389 aa25.54■■□□□ 1.68
HDDC3-202ENST00000394272 KCNQ2O43526 872 aa25.53■■□□□ 1.68
HDDC3-202ENST00000394272 USP44Q9H0E7 712 aa25.53■■□□□ 1.68
HDDC3-202ENST00000394272 CICQ96RK0 1608 aaPredicted RBP25.52■■□□□ 1.68
HDDC3-202ENST00000394272 ARFGEF2Q9Y6D5 1785 aa25.52■■□□□ 1.68
HDDC3-202ENST00000394272 GNAI3P08754 354 aa25.51■■□□□ 1.67
HDDC3-202ENST00000394272 SKAP1Q86WV1 359 aa25.51■■□□□ 1.67
HDDC3-202ENST00000394272 NHSQ6T4R5 1651 aa25.51■■□□□ 1.67
HDDC3-202ENST00000394272 STARD3NLO95772 234 aa25.51■■□□□ 1.67
HDDC3-202ENST00000394272 SMC5Q8IY18 1101 aa25.51■■□□□ 1.67
HDDC3-202ENST00000394272 SEPT12Q8IYM1 358 aa25.51■■□□□ 1.67
HDDC3-202ENST00000394272 CEP85Q6P2H3 762 aa25.5■■□□□ 1.67
HDDC3-202ENST00000394272 ANKRD13DQ6ZTN6 518 aa25.5■■□□□ 1.67
HDDC3-202ENST00000394272 RIC3Q7Z5B4 369 aa25.5■■□□□ 1.67
HDDC3-202ENST00000394272 RPAP2Q8IXW5 612 aaPredicted RBP25.5■■□□□ 1.67
HDDC3-202ENST00000394272 ANKRD44Q8N8A2 993 aa25.5■■□□□ 1.67
HDDC3-202ENST00000394272 ALDH1L1O75891 902 aa25.49■■□□□ 1.67
HDDC3-202ENST00000394272 IBTKQ9P2D0 1353 aaPredicted RBP25.49■■□□□ 1.67
HDDC3-202ENST00000394272 SBF2Q86WG5 1849 aa25.49■■□□□ 1.67
HDDC3-202ENST00000394272 NUP188Q5SRE5 1749 aa25.49■■□□□ 1.67
HDDC3-202ENST00000394272 GNAI2P04899 355 aa25.49■■□□□ 1.67
HDDC3-202ENST00000394272 CYP19A1P11511 503 aaPredicted RBP25.49■■□□□ 1.67
HDDC3-202ENST00000394272 LINS1Q8NG48 757 aa25.49■■□□□ 1.67
HDDC3-202ENST00000394272 PALLDQ8WX93 1383 aa25.48■■□□□ 1.67
HDDC3-202ENST00000394272 SMARCC1Q92922 1105 aaPredicted RBP25.47■■□□□ 1.67
HDDC3-202ENST00000394272 METTL22Q9BUU2 404 aaPredicted RBP25.47■■□□□ 1.67
HDDC3-202ENST00000394272 ZNF831Q5JPB2 1677 aa25.47■■□□□ 1.67
HDDC3-202ENST00000394272 PLBD2Q8NHP8 589 aa25.47■■□□□ 1.67
HDDC3-202ENST00000394272 BTAF1O14981 1849 aa25.46■■□□□ 1.67
HDDC3-202ENST00000394272 LOC102724428A0A0B4J2F2 783 aa25.45■■□□□ 1.67
HDDC3-202ENST00000394272 UBTFL1P0CB47 393 aaPredicted RBP25.45■■□□□ 1.67
HDDC3-202ENST00000394272 SIK1P57059 783 aa25.45■■□□□ 1.67
HDDC3-202ENST00000394272 CWF19L2Q2TBE0 894 aaKnown RBP25.45■■□□□ 1.67
HDDC3-202ENST00000394272 PDZRN3Q9UPQ7 1066 aa25.45■■□□□ 1.67
HDDC3-202ENST00000394272 BRWD3Q6RI45 1802 aa25.45■■□□□ 1.66
HDDC3-202ENST00000394272 IGKV5-2P06315 115 aa25.45■■□□□ 1.66
HDDC3-202ENST00000394272 ZNF772Q68DY9 489 aaPredicted RBP25.45■■□□□ 1.66
HDDC3-202ENST00000394272 TTLL7Q6ZT98 887 aa25.45■■□□□ 1.66
HDDC3-202ENST00000394272 FAM182BQ5T319 152 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms