RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 PTCD1O75127 700 aaKnown RBP10.85□□□□□ -0.67
TDP1-203ENST00000393454 MEX3CQ5U5Q3 659 aaKnown RBP10.85□□□□□ -0.67
TDP1-203ENST00000393454 ILDR1Q86SU0 546 aaPredicted RBP10.85□□□□□ -0.67
TDP1-203ENST00000393454 PI4KAP1Q8N8J0 262 aa10.85□□□□□ -0.67
TDP1-203ENST00000393454 SYTL4Q96C24 671 aaPredicted RBP10.85□□□□□ -0.67
TDP1-203ENST00000393454 USP16Q9Y5T5 823 aa10.85□□□□□ -0.67
TDP1-203ENST00000393454 SPATA31A6Q5VVP1 1343 aa10.85□□□□□ -0.67
TDP1-203ENST00000393454 TOGARAM1Q9Y4F4 1720 aa10.85□□□□□ -0.67
TDP1-203ENST00000393454 A0A0G2JS52 829 aa10.85□□□□□ -0.67
TDP1-203ENST00000393454 DNAAF4Q8WXU2 420 aa10.85□□□□□ -0.67
TDP1-203ENST00000393454 SRCIN1Q9C0H9 1055 aa10.85□□□□□ -0.67
TDP1-203ENST00000393454 DDX58O95786 925 aaKnown RBP10.84□□□□□ -0.67
TDP1-203ENST00000393454 PIGBQ92521 554 aa10.84□□□□□ -0.67
TDP1-203ENST00000393454 TNS2Q63HR2 1409 aa10.84□□□□□ -0.67
TDP1-203ENST00000393454 GNAI3P08754 354 aa10.83□□□□□ -0.68
TDP1-203ENST00000393454 PIP4K2AP48426 406 aaPredicted RBP10.83□□□□□ -0.68
TDP1-203ENST00000393454 PDIA6Q15084 440 aa10.83□□□□□ -0.68
TDP1-203ENST00000393454 SIRT2Q8IXJ6 389 aa10.83□□□□□ -0.68
TDP1-203ENST00000393454 MAP3K2Q9Y2U5 619 aa10.83□□□□□ -0.68
TDP1-203ENST00000393454 RBM19Q9Y4C8 960 aaKnown RBP10.83□□□□□ -0.68
TDP1-203ENST00000393454 PXDNLA1KZ92 1463 aa10.83□□□□□ -0.68
TDP1-203ENST00000393454 GNAI2P04899 355 aa10.83□□□□□ -0.68
TDP1-203ENST00000393454 FAM98CQ17RN3 349 aaKnown RBP10.83□□□□□ -0.68
TDP1-203ENST00000393454 KSR2Q6VAB6 950 aa10.83□□□□□ -0.68
TDP1-203ENST00000393454 BARGINQ6ZT62 677 aa10.83□□□□□ -0.68
TDP1-203ENST00000393454 RPAP2Q8IXW5 612 aaPredicted RBP10.83□□□□□ -0.68
TDP1-203ENST00000393454 SMC5Q8IY18 1101 aa10.83□□□□□ -0.68
TDP1-203ENST00000393454 ITGB4P16144 1822 aa10.82□□□□□ -0.68
TDP1-203ENST00000393454 MYT1Q01538 1121 aa10.82□□□□□ -0.68
TDP1-203ENST00000393454 VPS72Q15906 364 aa10.82□□□□□ -0.68
TDP1-203ENST00000393454 RIC3Q7Z5B4 369 aa10.82□□□□□ -0.68
TDP1-203ENST00000393454 ANKRD44Q8N8A2 993 aa10.82□□□□□ -0.68
TDP1-203ENST00000393454 XAGE3Q8WTP9 111 aa10.82□□□□□ -0.68
TDP1-203ENST00000393454 USP21Q9UK80 565 aa10.82□□□□□ -0.68
TDP1-203ENST00000393454 ASAP1Q9ULH1 1129 aa10.82□□□□□ -0.68
TDP1-203ENST00000393454 ADCY9O60503 1353 aa10.82□□□□□ -0.68
TDP1-203ENST00000393454 UBTFL1P0CB47 393 aaPredicted RBP10.81□□□□□ -0.68
TDP1-203ENST00000393454 PRIM1P49642 420 aaKnown RBP10.81□□□□□ -0.68
TDP1-203ENST00000393454 BEND3Q5T5X7 828 aa10.81□□□□□ -0.68
TDP1-203ENST00000393454 CEP85Q6P2H3 762 aa10.81□□□□□ -0.68
TDP1-203ENST00000393454 COPS6Q7L5N1 327 aa10.81□□□□□ -0.68
TDP1-203ENST00000393454 GCC1Q96CN9 775 aa10.81□□□□□ -0.68
TDP1-203ENST00000393454 RBM42Q9BTD8 480 aaKnown RBP10.81□□□□□ -0.68
TDP1-203ENST00000393454 KCPQ6ZWJ8 1503 aa10.81□□□□□ -0.68
TDP1-203ENST00000393454 LRP6O75581 1613 aa10.81□□□□□ -0.68
TDP1-203ENST00000393454 PAPPAQ13219 1627 aa10.81□□□□□ -0.68
TDP1-203ENST00000393454 UBR2Q8IWV8 1755 aa10.81□□□□□ -0.68
TDP1-203ENST00000393454 LAMB4A4D0S4 1761 aa10.81□□□□□ -0.68
TDP1-203ENST00000393454 N4BP2Q86UW6 1770 aaPredicted RBP10.81□□□□□ -0.68
TDP1-203ENST00000393454 BCL9LQ86UU0 1499 aa10.81□□□□□ -0.68
TDP1-203ENST00000393454 PDE4AP27815 886 aa10.81□□□□□ -0.68
TDP1-203ENST00000393454 ANKRD45Q5TZF3 282 aa10.81□□□□□ -0.68
TDP1-203ENST00000393454 FNBP4Q8N3X1 1017 aaPredicted RBP10.81□□□□□ -0.68
TDP1-203ENST00000393454 USP44Q9H0E7 712 aa10.81□□□□□ -0.68
TDP1-203ENST00000393454 ATG3Q9NT62 314 aa10.81□□□□□ -0.68
TDP1-203ENST00000393454 HMMRO75330 724 aa10.8□□□□□ -0.68
TDP1-203ENST00000393454 MARCH10Q8NA82 808 aaPredicted RBP10.8□□□□□ -0.68
TDP1-203ENST00000393454 ACSBG1Q96GR2 724 aa10.8□□□□□ -0.68
TDP1-203ENST00000393454 LRRFIP2Q9Y608 721 aaKnown RBP10.8□□□□□ -0.68
TDP1-203ENST00000393454 ATP10DQ9P241 1426 aa10.8□□□□□ -0.68
TDP1-203ENST00000393454 A1BGP04217 495 aa10.8□□□□□ -0.68
TDP1-203ENST00000393454 NUCB1Q02818 461 aa10.8□□□□□ -0.68
TDP1-203ENST00000393454 LNPKQ9C0E8 428 aa10.8□□□□□ -0.68
TDP1-203ENST00000393454 BCL11AQ9H165 835 aa10.8□□□□□ -0.68
TDP1-203ENST00000393454 C9orf78Q9NZ63 289 aaPredicted RBP10.8□□□□□ -0.68
TDP1-203ENST00000393454 ZBTB47Q9UFB7 747 aaPredicted RBP10.8□□□□□ -0.68
TDP1-203ENST00000393454 BCL9O00512 1426 aa10.79□□□□□ -0.68
TDP1-203ENST00000393454 NEXNQ0ZGT2 675 aa10.79□□□□□ -0.68
TDP1-203ENST00000393454 ANKRD13DQ6ZTN6 518 aa10.79□□□□□ -0.68
TDP1-203ENST00000393454 CHD1LQ86WJ1 897 aa10.79□□□□□ -0.68
TDP1-203ENST00000393454 GLI3P10071 1580 aa10.79□□□□□ -0.68
TDP1-203ENST00000393454 DOT1LQ8TEK3 1739 aa10.79□□□□□ -0.68
TDP1-203ENST00000393454 ERBB4Q15303 1308 aa10.78□□□□□ -0.68
TDP1-203ENST00000393454 NBPF26B4DH59 902 aa10.78□□□□□ -0.68
TDP1-203ENST00000393454 ALDH1L1O75891 902 aa10.78□□□□□ -0.68
TDP1-203ENST00000393454 CWF19L2Q2TBE0 894 aaKnown RBP10.78□□□□□ -0.68
TDP1-203ENST00000393454 NBPF14Q5TI25 921 aa10.78□□□□□ -0.68
TDP1-203ENST00000393454 NBPF10Q6P3W6 841 aaKnown RBP10.78□□□□□ -0.68
TDP1-203ENST00000393454 NBPF15Q8N660 670 aa10.78□□□□□ -0.68
TDP1-203ENST00000393454 TEX13AQ9BXU3 409 aaPredicted RBP10.78□□□□□ -0.68
TDP1-203ENST00000393454 BACH2Q9BYV9 841 aa10.78□□□□□ -0.68
TDP1-203ENST00000393454 DCTPP1Q9H773 170 aa10.78□□□□□ -0.68
TDP1-203ENST00000393454 APBB1O00213 710 aa10.78□□□□□ -0.68
TDP1-203ENST00000393454 DNAJC10Q8IXB1 793 aa10.78□□□□□ -0.68
TDP1-203ENST00000393454 LINS1Q8NG48 757 aa10.78□□□□□ -0.68
TDP1-203ENST00000393454 MYD88Q99836 296 aa10.78□□□□□ -0.68
TDP1-203ENST00000393454 AFF2P51816 1311 aa10.77□□□□□ -0.68
TDP1-203ENST00000393454 STARD3NLO95772 234 aa10.77□□□□□ -0.69
TDP1-203ENST00000393454 NBPF7P0C2Y1 421 aaPredicted RBP10.77□□□□□ -0.69
TDP1-203ENST00000393454 FAM161AQ3B820 660 aa10.77□□□□□ -0.69
TDP1-203ENST00000393454 LRP10Q7Z4F1 713 aa10.77□□□□□ -0.69
TDP1-203ENST00000393454 VSIG10Q8N0Z9 540 aa10.77□□□□□ -0.69
TDP1-203ENST00000393454 METTL22Q9BUU2 404 aaPredicted RBP10.77□□□□□ -0.69
TDP1-203ENST00000393454 ZNF330Q9Y3S2 320 aaPredicted RBP10.77□□□□□ -0.69
TDP1-203ENST00000393454 ATP8B2P98198 1209 aa10.77□□□□□ -0.69
TDP1-203ENST00000393454 PLBD2Q8NHP8 589 aa10.76□□□□□ -0.69
TDP1-203ENST00000393454 ARXQ96QS3 562 aa10.76□□□□□ -0.69
TDP1-203ENST00000393454 PNMA6EA0A0J9YXQ4 647 aa10.75□□□□□ -0.69
TDP1-203ENST00000393454 IGKV5-2P06315 115 aa10.75□□□□□ -0.69
TDP1-203ENST00000393454 TTLL7Q6ZT98 887 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms