RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 CHMP4BQ9H444 224 aaKnown RBP18.74■□□□□ 0.59
MKS1-202ENST00000393119 HSP90AB1P08238 724 aaKnown RBP18.73■□□□□ 0.59
MKS1-202ENST00000393119 DCTPP1Q9H773 170 aa18.73■□□□□ 0.59
MKS1-202ENST00000393119 GNAI2P04899 355 aa18.72■□□□□ 0.59
MKS1-202ENST00000393119 SRCIN1Q9C0H9 1055 aa18.72■□□□□ 0.59
MKS1-202ENST00000393119 COPS6Q7L5N1 327 aa18.71■□□□□ 0.59
MKS1-202ENST00000393119 XAGE3Q8WTP9 111 aa18.71■□□□□ 0.59
MKS1-202ENST00000393119 JARID2Q92833 1246 aaPredicted RBP18.71■□□□□ 0.59
MKS1-202ENST00000393119 GCC1Q96CN9 775 aa18.71■□□□□ 0.59
MKS1-202ENST00000393119 FMNL2Q96PY5 1086 aa18.71■□□□□ 0.59
MKS1-202ENST00000393119 EXOC6BQ9Y2D4 811 aa18.71■□□□□ 0.59
MKS1-202ENST00000393119 PHLPP1O60346 1717 aa18.71■□□□□ 0.59
MKS1-202ENST00000393119 C5P01031 1676 aa18.71■□□□□ 0.59
MKS1-202ENST00000393119 SNRPA1P09661 255 aaKnown RBP18.71■□□□□ 0.59
MKS1-202ENST00000393119 NKX1-1Q15270 411 aaPredicted RBP18.71■□□□□ 0.59
MKS1-202ENST00000393119 RPAP2Q8IXW5 612 aaPredicted RBP18.71■□□□□ 0.59
MKS1-202ENST00000393119 IPO9Q96P70 1041 aaKnown RBP18.71■□□□□ 0.59
MKS1-202ENST00000393119 DDX21Q9NR30 783 aaKnown RBP eCLIP18.71■□□□□ 0.59
MKS1-202ENST00000393119 ASAP1Q9ULH1 1129 aa18.71■□□□□ 0.59
MKS1-202ENST00000393119 A1BGP04217 495 aa18.7■□□□□ 0.58
MKS1-202ENST00000393119 LRP10Q7Z4F1 713 aa18.69■□□□□ 0.58
MKS1-202ENST00000393119 PIGBQ92521 554 aa18.69■□□□□ 0.58
MKS1-202ENST00000393119 MRC1P22897 1456 aa18.69■□□□□ 0.58
MKS1-202ENST00000393119 KSR2Q6VAB6 950 aa18.69■□□□□ 0.58
MKS1-202ENST00000393119 CCDC9Q9Y3X0 531 aaKnown RBP18.69■□□□□ 0.58
MKS1-202ENST00000393119 SHANK3Q9BYB0 1731 aa18.69■□□□□ 0.58
MKS1-202ENST00000393119 NBPF26B4DH59 902 aa18.68■□□□□ 0.58
MKS1-202ENST00000393119 ERVV-2B6SEH9 535 aa18.68■□□□□ 0.58
MKS1-202ENST00000393119 UBTFL1P0CB47 393 aaPredicted RBP18.68■□□□□ 0.58
MKS1-202ENST00000393119 NBPF14Q5TI25 921 aa18.68■□□□□ 0.58
MKS1-202ENST00000393119 NBPF10Q6P3W6 841 aaKnown RBP18.68■□□□□ 0.58
MKS1-202ENST00000393119 NBPF15Q8N660 670 aa18.68■□□□□ 0.58
MKS1-202ENST00000393119 SYTL4Q96C24 671 aaPredicted RBP18.68■□□□□ 0.58
MKS1-202ENST00000393119 PARP4Q9UKK3 1724 aaKnown RBP18.68■□□□□ 0.58
MKS1-202ENST00000393119 A0A0G2JS52 829 aa18.68■□□□□ 0.58
MKS1-202ENST00000393119 HYPKQ9NX55 129 aa18.68■□□□□ 0.58
MKS1-202ENST00000393119 GNAI3P08754 354 aa18.67■□□□□ 0.58
MKS1-202ENST00000393119 ANP32AP39687 249 aaKnown RBP18.67■□□□□ 0.58
MKS1-202ENST00000393119 NBR1Q14596 966 aa18.67■□□□□ 0.58
MKS1-202ENST00000393119 IGKV5-2P06315 115 aa18.66■□□□□ 0.58
MKS1-202ENST00000393119 TSHZ3Q63HK5 1081 aa18.66■□□□□ 0.58
MKS1-202ENST00000393119 RIC3Q7Z5B4 369 aa18.66■□□□□ 0.58
MKS1-202ENST00000393119 C8orf37Q96NL8 207 aa18.66■□□□□ 0.58
MKS1-202ENST00000393119 TMOD3Q9NYL9 352 aa18.66■□□□□ 0.58
MKS1-202ENST00000393119 DISP2A7MBM2 1401 aa18.66■□□□□ 0.58
MKS1-202ENST00000393119 COL22A1Q8NFW1 1626 aaPredicted RBP18.66■□□□□ 0.58
MKS1-202ENST00000393119 COL14A1Q05707 1796 aaKnown RBP18.65■□□□□ 0.58
MKS1-202ENST00000393119 EXOC5O00471 708 aa18.65■□□□□ 0.58
MKS1-202ENST00000393119 SLC4A3P48751 1232 aa18.65■□□□□ 0.58
MKS1-202ENST00000393119 ATP8B2P98198 1209 aa18.65■□□□□ 0.58
MKS1-202ENST00000393119 PPP1R42Q7Z4L9 355 aa18.64■□□□□ 0.58
MKS1-202ENST00000393119 ACSBG1Q96GR2 724 aa18.64■□□□□ 0.58
MKS1-202ENST00000393119 ATP5J2-PTCD1G3V325 749 aa18.64■□□□□ 0.57
MKS1-202ENST00000393119 TTLL7Q6ZT98 887 aa18.64■□□□□ 0.57
MKS1-202ENST00000393119 PLEKHM2Q8IWE5 1019 aa18.64■□□□□ 0.57
MKS1-202ENST00000393119 MYD88Q99836 296 aa18.64■□□□□ 0.57
MKS1-202ENST00000393119 SPATA31A1Q5TZJ5 1347 aa18.64■□□□□ 0.57
MKS1-202ENST00000393119 GLI3P10071 1580 aa18.64■□□□□ 0.57
MKS1-202ENST00000393119 RBM42Q9BTD8 480 aaKnown RBP18.63■□□□□ 0.57
MKS1-202ENST00000393119 ATG3Q9NT62 314 aa18.63■□□□□ 0.57
MKS1-202ENST00000393119 ZNF330Q9Y3S2 320 aaPredicted RBP18.63■□□□□ 0.57
MKS1-202ENST00000393119 TOGARAM1Q9Y4F4 1720 aa18.63■□□□□ 0.57
MKS1-202ENST00000393119 GSPT1P15170 499 aaKnown RBP18.62■□□□□ 0.57
MKS1-202ENST00000393119 PRIM1P49642 420 aaKnown RBP18.62■□□□□ 0.57
MKS1-202ENST00000393119 C9orf78Q9NZ63 289 aaPredicted RBP18.62■□□□□ 0.57
MKS1-202ENST00000393119 AEBP2Q6ZN18 517 aaPredicted RBP18.62■□□□□ 0.57
MKS1-202ENST00000393119 ANKRD13DQ6ZTN6 518 aa18.62■□□□□ 0.57
MKS1-202ENST00000393119 SLC4A9Q96Q91 983 aa18.62■□□□□ 0.57
MKS1-202ENST00000393119 KCPQ6ZWJ8 1503 aa18.61■□□□□ 0.57
MKS1-202ENST00000393119 PXDNLA1KZ92 1463 aa18.61■□□□□ 0.57
MKS1-202ENST00000393119 DNAJC10Q8IXB1 793 aa18.61■□□□□ 0.57
MKS1-202ENST00000393119 KAZALD1Q96I82 304 aa18.61■□□□□ 0.57
MKS1-202ENST00000393119 KAT6BQ8WYB5 2073 aa18.61■□□□□ 0.57
MKS1-202ENST00000393119 SRGAP3O43295 1099 aa18.61■□□□□ 0.57
MKS1-202ENST00000393119 RTL5Q5HYW3 569 aaPredicted RBP18.61■□□□□ 0.57
MKS1-202ENST00000393119 IL1RAPL2Q9NP60 686 aa18.61■□□□□ 0.57
MKS1-202ENST00000393119 CACNA1FO60840 1977 aa18.6■□□□□ 0.57
MKS1-202ENST00000393119 PLEKHG2Q9H7P9 1386 aa18.6■□□□□ 0.57
MKS1-202ENST00000393119 SUCLG2Q96I99 432 aa18.6■□□□□ 0.57
MKS1-202ENST00000393119 NGLY1Q96IV0 654 aa18.6■□□□□ 0.57
MKS1-202ENST00000393119 HMMRO75330 724 aa18.6■□□□□ 0.57
MKS1-202ENST00000393119 MFAP1P55081 439 aaKnown RBP18.6■□□□□ 0.57
MKS1-202ENST00000393119 FAM98CQ17RN3 349 aaKnown RBP18.6■□□□□ 0.57
MKS1-202ENST00000393119 MARCH10Q8NA82 808 aaPredicted RBP18.6■□□□□ 0.57
MKS1-202ENST00000393119 PA2G4Q9UQ80 394 aaKnown RBP18.6■□□□□ 0.57
MKS1-202ENST00000393119 DDX58O95786 925 aaKnown RBP18.59■□□□□ 0.57
MKS1-202ENST00000393119 CHMP4AQ9BY43 222 aa18.59■□□□□ 0.57
MKS1-202ENST00000393119 ZBTB3Q9H5J0 574 aa18.59■□□□□ 0.57
MKS1-202ENST00000393119 PLCH1Q4KWH8 1693 aa18.59■□□□□ 0.57
MKS1-202ENST00000393119 DDB1Q16531 1140 aa18.59■□□□□ 0.57
MKS1-202ENST00000393119 EPHA10Q5JZY3 1008 aa18.59■□□□□ 0.57
MKS1-202ENST00000393119 LINS1Q8NG48 757 aa18.59■□□□□ 0.57
MKS1-202ENST00000393119 SPATA31A5Q5VU36 1347 aa18.58■□□□□ 0.57
MKS1-202ENST00000393119 SPATA31A7Q8IWB4 1347 aa18.58■□□□□ 0.57
MKS1-202ENST00000393119 NEURL1BA8MQ27 555 aa18.58■□□□□ 0.56
MKS1-202ENST00000393119 SURF6O75683 361 aaKnown RBP18.57■□□□□ 0.56
MKS1-202ENST00000393119 KLHDC4Q8TBB5 520 aa18.57■□□□□ 0.56
MKS1-202ENST00000393119 SSH3Q8TE77 659 aa18.57■□□□□ 0.56
MKS1-202ENST00000393119 METTL22Q9BUU2 404 aaPredicted RBP18.57■□□□□ 0.56
MKS1-202ENST00000393119 GRM8O00222 908 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms