RNA–Protein interactions for RNA: ENST00000392784.6

USP30-203, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 2 BASIC

Gene USP30, Length 2,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-203ENST00000392784 USP35Q9P2H5 1018 aa11.57□□□□□ -0.56
USP30-203ENST00000392784 MAP3K2Q9Y2U5 619 aa11.57□□□□□ -0.56
USP30-203ENST00000392784 HMMRO75330 724 aa11.56□□□□□ -0.56
USP30-203ENST00000392784 ATP8B2P98198 1209 aa11.56□□□□□ -0.56
USP30-203ENST00000392784 CWF19L2Q2TBE0 894 aaKnown RBP11.56□□□□□ -0.56
USP30-203ENST00000392784 TBC1D9Q6ZT07 1266 aa11.56□□□□□ -0.56
USP30-203ENST00000392784 USP16Q9Y5T5 823 aa11.56□□□□□ -0.56
USP30-203ENST00000392784 MYL6BP14649 208 aa11.55□□□□□ -0.56
USP30-203ENST00000392784 C22orf23Q9BZE7 217 aa11.55□□□□□ -0.56
USP30-203ENST00000392784 UPF2Q9HAU5 1272 aaKnown RBP11.55□□□□□ -0.56
USP30-203ENST00000392784 TUBGCP6Q96RT7 1819 aa11.55□□□□□ -0.56
USP30-203ENST00000392784 TTC22Q5TAA0 569 aa11.55□□□□□ -0.56
USP30-203ENST00000392784 TOGARAM1Q9Y4F4 1720 aa11.55□□□□□ -0.56
USP30-203ENST00000392784 ZCRB1Q8TBF4 217 aaKnown RBP11.54□□□□□ -0.56
USP30-203ENST00000392784 CABP4P57796 275 aa11.54□□□□□ -0.56
USP30-203ENST00000392784 PPP1R42Q7Z4L9 355 aa11.54□□□□□ -0.56
USP30-203ENST00000392784 DDX54Q8TDD1 881 aaKnown RBP11.54□□□□□ -0.56
USP30-203ENST00000392784 DDX21Q9NR30 783 aaKnown RBP eCLIP11.54□□□□□ -0.56
USP30-203ENST00000392784 KSR2Q6VAB6 950 aa11.53□□□□□ -0.56
USP30-203ENST00000392784 CARD10Q9BWT7 1032 aa11.53□□□□□ -0.56
USP30-203ENST00000392784 KAT6BQ8WYB5 2073 aa11.53□□□□□ -0.56
USP30-203ENST00000392784 IBTKQ9P2D0 1353 aaPredicted RBP11.53□□□□□ -0.56
USP30-203ENST00000392784 EVA1CP58658 441 aa11.53□□□□□ -0.56
USP30-203ENST00000392784 HYPKQ9NX55 129 aa11.53□□□□□ -0.56
USP30-203ENST00000392784 BTG4Q9NY30 223 aa11.53□□□□□ -0.56
USP30-203ENST00000392784 COL16A1Q07092 1604 aaPredicted RBP11.53□□□□□ -0.56
USP30-203ENST00000392784 LAMB4A4D0S4 1761 aa11.53□□□□□ -0.56
USP30-203ENST00000392784 UBR2Q8IWV8 1755 aa11.53□□□□□ -0.56
USP30-203ENST00000392784 PCDH11XQ9BZA7 1347 aa11.53□□□□□ -0.56
USP30-203ENST00000392784 PCDH11YQ9BZA8 1340 aa11.53□□□□□ -0.56
USP30-203ENST00000392784 IL2RBP14784 551 aa11.52□□□□□ -0.56
USP30-203ENST00000392784 LRP10Q7Z4F1 713 aa11.52□□□□□ -0.56
USP30-203ENST00000392784 TTC5Q8N0Z6 440 aa11.52□□□□□ -0.56
USP30-203ENST00000392784 SSH3Q8TE77 659 aa11.52□□□□□ -0.56
USP30-203ENST00000392784 XAGE3Q8WTP9 111 aa11.52□□□□□ -0.56
USP30-203ENST00000392784 DAXXQ9UER7 740 aaPredicted RBP11.52□□□□□ -0.56
USP30-203ENST00000392784 SALL3Q9BXA9 1300 aa11.52□□□□□ -0.57
USP30-203ENST00000392784 SDSP20132 328 aa11.52□□□□□ -0.57
USP30-203ENST00000392784 TBC1D2Q9BYX2 928 aa11.52□□□□□ -0.57
USP30-203ENST00000392784 IL1RAPL2Q9NP60 686 aa11.52□□□□□ -0.57
USP30-203ENST00000392784 LTBP4Q8N2S1 1624 aa11.52□□□□□ -0.57
USP30-203ENST00000392784 SRGAP3O43295 1099 aa11.51□□□□□ -0.57
USP30-203ENST00000392784 PDE1AP54750 535 aa11.51□□□□□ -0.57
USP30-203ENST00000392784 POLA2Q14181 598 aa11.51□□□□□ -0.57
USP30-203ENST00000392784 COPS6Q7L5N1 327 aa11.51□□□□□ -0.57
USP30-203ENST00000392784 LRRCC1Q9C099 1032 aa11.51□□□□□ -0.57
USP30-203ENST00000392784 AFDNP55196 1824 aaKnown RBP11.51□□□□□ -0.57
USP30-203ENST00000392784 PAPPAQ13219 1627 aa11.51□□□□□ -0.57
USP30-203ENST00000392784 CDC45O75419 566 aa11.51□□□□□ -0.57
USP30-203ENST00000392784 IGKV5-2P06315 115 aa11.51□□□□□ -0.57
USP30-203ENST00000392784 HSP90AB1P08238 724 aaKnown RBP11.51□□□□□ -0.57
USP30-203ENST00000392784 SNRPA1P09661 255 aaKnown RBP11.51□□□□□ -0.57
USP30-203ENST00000392784 FMNL2Q96PY5 1086 aa11.51□□□□□ -0.57
USP30-203ENST00000392784 ARFGEF2Q9Y6D5 1785 aa11.51□□□□□ -0.57
USP30-203ENST00000392784 PLEKHG2Q9H7P9 1386 aa11.51□□□□□ -0.57
USP30-203ENST00000392784 CHMP4AQ9BY43 222 aa11.5□□□□□ -0.57
USP30-203ENST00000392784 KCPQ6ZWJ8 1503 aa11.5□□□□□ -0.57
USP30-203ENST00000392784 JARID2Q92833 1246 aaPredicted RBP11.5□□□□□ -0.57
USP30-203ENST00000392784 KAZALD1Q96I82 304 aa11.5□□□□□ -0.57
USP30-203ENST00000392784 AHDC1Q5TGY3 1603 aaPredicted RBP11.5□□□□□ -0.57
USP30-203ENST00000392784 PTCD1O75127 700 aaKnown RBP11.49□□□□□ -0.57
USP30-203ENST00000392784 SURF6O75683 361 aaKnown RBP11.49□□□□□ -0.57
USP30-203ENST00000392784 RIC3Q7Z5B4 369 aa11.49□□□□□ -0.57
USP30-203ENST00000392784 SPRYD3Q8NCJ5 442 aa11.49□□□□□ -0.57
USP30-203ENST00000392784 KIF2CQ99661 725 aa11.49□□□□□ -0.57
USP30-203ENST00000392784 C9orf78Q9NZ63 289 aaPredicted RBP11.49□□□□□ -0.57
USP30-203ENST00000392784 ITGB4P16144 1822 aa11.49□□□□□ -0.57
USP30-203ENST00000392784 RBM25P49756 843 aaKnown RBP11.49□□□□□ -0.57
USP30-203ENST00000392784 NUTM1Q86Y26 1132 aa11.49□□□□□ -0.57
USP30-203ENST00000392784 SUCLG2Q96I99 432 aa11.49□□□□□ -0.57
USP30-203ENST00000392784 SLKQ9H2G2 1235 aaPredicted RBP11.49□□□□□ -0.57
USP30-203ENST00000392784 PA2G4Q9UQ80 394 aaKnown RBP11.49□□□□□ -0.57
USP30-203ENST00000392784 COL14A1Q05707 1796 aaKnown RBP11.49□□□□□ -0.57
USP30-203ENST00000392784 COL22A1Q8NFW1 1626 aaPredicted RBP11.48□□□□□ -0.57
USP30-203ENST00000392784 NBPF26B4DH59 902 aa11.48□□□□□ -0.57
USP30-203ENST00000392784 ALDH1L1O75891 902 aa11.48□□□□□ -0.57
USP30-203ENST00000392784 NKX1-1Q15270 411 aaPredicted RBP11.48□□□□□ -0.57
USP30-203ENST00000392784 NBPF14Q5TI25 921 aa11.48□□□□□ -0.57
USP30-203ENST00000392784 NBPF10Q6P3W6 841 aaKnown RBP11.48□□□□□ -0.57
USP30-203ENST00000392784 NBPF15Q8N660 670 aa11.48□□□□□ -0.57
USP30-203ENST00000392784 LINS1Q8NG48 757 aa11.48□□□□□ -0.57
USP30-203ENST00000392784 MYD88Q99836 296 aa11.48□□□□□ -0.57
USP30-203ENST00000392784 MX1P20591 662 aa11.48□□□□□ -0.57
USP30-203ENST00000392784 RBM42Q9BTD8 480 aaKnown RBP11.48□□□□□ -0.57
USP30-203ENST00000392784 OSBPL3Q9H4L5 887 aa11.48□□□□□ -0.57
USP30-203ENST00000392784 GRM8O00222 908 aa11.47□□□□□ -0.57
USP30-203ENST00000392784 PHLPP1O60346 1717 aa11.47□□□□□ -0.57
USP30-203ENST00000392784 DDX58O95786 925 aaKnown RBP11.47□□□□□ -0.57
USP30-203ENST00000392784 A1BGP04217 495 aa11.47□□□□□ -0.57
USP30-203ENST00000392784 UNC5CLQ8IV45 518 aa11.47□□□□□ -0.57
USP30-203ENST00000392784 BICC1Q9H694 974 aaKnown RBP11.47□□□□□ -0.57
USP30-203ENST00000392784 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.47□□□□□ -0.57
USP30-203ENST00000392784 AK9Q5TCS8 1911 aa11.47□□□□□ -0.57
USP30-203ENST00000392784 NEURL1BA8MQ27 555 aa11.47□□□□□ -0.57
USP30-203ENST00000392784 ERVV-2B6SEH9 535 aa11.47□□□□□ -0.57
USP30-203ENST00000392784 BECN1Q14457 450 aa11.47□□□□□ -0.57
USP30-203ENST00000392784 RHPN1Q8TCX5 695 aa11.47□□□□□ -0.57
USP30-203ENST00000392784 PLCH1Q4KWH8 1693 aa11.47□□□□□ -0.57
USP30-203ENST00000392784 ATP5J2-PTCD1G3V325 749 aa11.46□□□□□ -0.57
USP30-203ENST00000392784 CD2BP2O95400 341 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms