RNA–Protein interactions for RNA: ENST00000392114.6

VIL1-202, Transcript of villin 1, humanhuman

TSL 2 BASIC

Gene VIL1, Length 1,968 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-202ENST00000392114 PCDHB15Q9Y5E8 787 aa15.22■□□□□ 0.03
VIL1-202ENST00000392114 LAMB4A4D0S4 1761 aa15.22■□□□□ 0.03
VIL1-202ENST00000392114 TOGARAM1Q9Y4F4 1720 aa15.21■□□□□ 0.03
VIL1-202ENST00000392114 PHAXQ9H814 394 aaKnown RBP15.21■□□□□ 0.03
VIL1-202ENST00000392114 HDAC5Q9UQL6 1122 aa15.21■□□□□ 0.03
VIL1-202ENST00000392114 N4BP2Q86UW6 1770 aaPredicted RBP15.21■□□□□ 0.02
VIL1-202ENST00000392114 C5P01031 1676 aa15.2■□□□□ 0.02
VIL1-202ENST00000392114 GNAI3P08754 354 aa15.2■□□□□ 0.02
VIL1-202ENST00000392114 KSR2Q6VAB6 950 aa15.2■□□□□ 0.02
VIL1-202ENST00000392114 DNAAF4Q8WXU2 420 aa15.2■□□□□ 0.02
VIL1-202ENST00000392114 PIGBQ92521 554 aa15.2■□□□□ 0.02
VIL1-202ENST00000392114 BCL9O00512 1426 aa15.19■□□□□ 0.02
VIL1-202ENST00000392114 F6X3S4 739 aa15.19■□□□□ 0.02
VIL1-202ENST00000392114 IGHDP01880 384 aa15.19■□□□□ 0.02
VIL1-202ENST00000392114 FAM98CQ17RN3 349 aaKnown RBP15.19■□□□□ 0.02
VIL1-202ENST00000392114 RPAP2Q8IXW5 612 aaPredicted RBP15.19■□□□□ 0.02
VIL1-202ENST00000392114 TRPC5Q9UL62 973 aaPredicted RBP15.19■□□□□ 0.02
VIL1-202ENST00000392114 SRCIN1Q9C0H9 1055 aa15.18■□□□□ 0.02
VIL1-202ENST00000392114 USP16Q9Y5T5 823 aa15.18■□□□□ 0.02
VIL1-202ENST00000392114 KCPQ6ZWJ8 1503 aa15.18■□□□□ 0.02
VIL1-202ENST00000392114 PRAMEF22A3QJZ6 481 aa15.18■□□□□ 0.02
VIL1-202ENST00000392114 PI4KAP2A4QPH2 592 aa15.18■□□□□ 0.02
VIL1-202ENST00000392114 PI4KAP1Q8N8J0 262 aa15.18■□□□□ 0.02
VIL1-202ENST00000392114 SYTL4Q96C24 671 aaPredicted RBP15.18■□□□□ 0.02
VIL1-202ENST00000392114 GJD4Q96KN9 370 aaPredicted RBP15.18■□□□□ 0.02
VIL1-202ENST00000392114 AFF2P51816 1311 aa15.18■□□□□ 0.02
VIL1-202ENST00000392114 A0A0G2JS52 829 aa15.17■□□□□ 0.02
VIL1-202ENST00000392114 PTCD1O75127 700 aaKnown RBP15.17■□□□□ 0.02
VIL1-202ENST00000392114 STARD3NLO95772 234 aa15.17■□□□□ 0.02
VIL1-202ENST00000392114 MYT1Q01538 1121 aa15.17■□□□□ 0.02
VIL1-202ENST00000392114 ATG3Q9NT62 314 aa15.17■□□□□ 0.02
VIL1-202ENST00000392114 DOT1LQ8TEK3 1739 aa15.17■□□□□ 0.02
VIL1-202ENST00000392114 ATP10DQ9P241 1426 aa15.17■□□□□ 0.02
VIL1-202ENST00000392114 PRIM1P49642 420 aaKnown RBP15.16■□□□□ 0.02
VIL1-202ENST00000392114 PDIA6Q15084 440 aa15.16■□□□□ 0.02
VIL1-202ENST00000392114 MARCH10Q8NA82 808 aaPredicted RBP15.16■□□□□ 0.02
VIL1-202ENST00000392114 GCC1Q96CN9 775 aa15.16■□□□□ 0.02
VIL1-202ENST00000392114 HMMRO75330 724 aa15.16■□□□□ 0.02
VIL1-202ENST00000392114 ALDH1L1O75891 902 aa15.16■□□□□ 0.02
VIL1-202ENST00000392114 GNAI2P04899 355 aa15.16■□□□□ 0.02
VIL1-202ENST00000392114 NEXNQ0ZGT2 675 aa15.16■□□□□ 0.02
VIL1-202ENST00000392114 RIC3Q7Z5B4 369 aa15.16■□□□□ 0.02
VIL1-202ENST00000392114 MYL6BP14649 208 aa15.15■□□□□ 0.02
VIL1-202ENST00000392114 SMARCC1Q92922 1105 aaPredicted RBP15.15■□□□□ 0.02
VIL1-202ENST00000392114 ASAP1Q9ULH1 1129 aa15.15■□□□□ 0.02
VIL1-202ENST00000392114 ANXA1P04083 346 aa15.15■□□□□ 0.02
VIL1-202ENST00000392114 RBM42Q9BTD8 480 aaKnown RBP15.15■□□□□ 0.02
VIL1-202ENST00000392114 MAP3K2Q9Y2U5 619 aa15.15■□□□□ 0.02
VIL1-202ENST00000392114 IBTKQ9P2D0 1353 aaPredicted RBP15.14■□□□□ 0.01
VIL1-202ENST00000392114 AIMP1Q12904 312 aaKnown RBP15.14■□□□□ 0.01
VIL1-202ENST00000392114 PROSER3Q2NL68 480 aa15.14■□□□□ 0.01
VIL1-202ENST00000392114 ANKRD13DQ6ZTN6 518 aa15.14■□□□□ 0.01
VIL1-202ENST00000392114 COPS6Q7L5N1 327 aa15.14■□□□□ 0.01
VIL1-202ENST00000392114 ONECUT3O60422 494 aaPredicted RBP15.13■□□□□ 0.01
VIL1-202ENST00000392114 UBTFL1P0CB47 393 aaPredicted RBP15.13■□□□□ 0.01
VIL1-202ENST00000392114 BEND3Q5T5X7 828 aa15.13■□□□□ 0.01
VIL1-202ENST00000392114 SMC5Q8IY18 1101 aa15.13■□□□□ 0.01
VIL1-202ENST00000392114 ANKRD44Q8N8A2 993 aa15.13■□□□□ 0.01
VIL1-202ENST00000392114 LINS1Q8NG48 757 aa15.13■□□□□ 0.01
VIL1-202ENST00000392114 MEIS3Q99687 375 aa15.13■□□□□ 0.01
VIL1-202ENST00000392114 ATRNO75882 1429 aa15.13■□□□□ 0.01
VIL1-202ENST00000392114 ADCY9O60503 1353 aa15.13■□□□□ 0.01
VIL1-202ENST00000392114 XAGE3Q8WTP9 111 aa15.13■□□□□ 0.01
VIL1-202ENST00000392114 THSD7AQ9UPZ6 1657 aa15.13■□□□□ 0.01
VIL1-202ENST00000392114 GLI3P10071 1580 aa15.12■□□□□ 0.01
VIL1-202ENST00000392114 PLBD2Q8NHP8 589 aa15.12■□□□□ 0.01
VIL1-202ENST00000392114 NPM2Q86SE8 214 aaKnown RBP15.11■□□□□ 0.01
VIL1-202ENST00000392114 USP44Q9H0E7 712 aa15.11■□□□□ 0.01
VIL1-202ENST00000392114 C1orf115Q9H7X2 142 aa15.11■□□□□ 0.01
VIL1-202ENST00000392114 QTRT2Q9H974 415 aaKnown RBP15.11■□□□□ 0.01
VIL1-202ENST00000392114 ZBTB47Q9UFB7 747 aaPredicted RBP15.11■□□□□ 0.01
VIL1-202ENST00000392114 METTL22Q9BUU2 404 aaPredicted RBP15.11■□□□□ 0.01
VIL1-202ENST00000392114 C9orf78Q9NZ63 289 aaPredicted RBP15.11■□□□□ 0.01
VIL1-202ENST00000392114 CEP85Q6P2H3 762 aa15.1■□□□□ 0.01
VIL1-202ENST00000392114 LRP10Q7Z4F1 713 aa15.1■□□□□ 0.01
VIL1-202ENST00000392114 ACSBG1Q96GR2 724 aa15.1■□□□□ 0.01
VIL1-202ENST00000392114 ZNF772Q68DY9 489 aaPredicted RBP15.09■□□□□ 0.01
VIL1-202ENST00000392114 PDZRN3Q9UPQ7 1066 aa15.09■□□□□ 0.01
VIL1-202ENST00000392114 A1BGP04217 495 aa15.09■□□□□ 0.01
VIL1-202ENST00000392114 DNAJC10Q8IXB1 793 aa15.09■□□□□ 0.01
VIL1-202ENST00000392114 NBPF26B4DH59 902 aa15.08■□□□□ 0
VIL1-202ENST00000392114 NBPF14Q5TI25 921 aa15.08■□□□□ 0
VIL1-202ENST00000392114 NBPF10Q6P3W6 841 aaKnown RBP15.08■□□□□ 0
VIL1-202ENST00000392114 NBPF15Q8N660 670 aa15.08■□□□□ 0
VIL1-202ENST00000392114 DCTPP1Q9H773 170 aa15.08■□□□□ 0
VIL1-202ENST00000392114 ATP8B2P98198 1209 aa15.07■□□□□ 0
VIL1-202ENST00000392114 SIRT2Q8IXJ6 389 aa15.07■□□□□ 0
VIL1-202ENST00000392114 CYP19A1P11511 503 aaPredicted RBP15.07■□□□□ 0
VIL1-202ENST00000392114 NUCB1Q02818 461 aa15.07■□□□□ 0
VIL1-202ENST00000392114 KIF6Q6ZMV9 814 aa15.07■□□□□ 0
VIL1-202ENST00000392114 ZNF831Q5JPB2 1677 aa15.07■□□□□ 0
VIL1-202ENST00000392114 ARFGEF2Q9Y6D5 1785 aa15.07■□□□□ 0
VIL1-202ENST00000392114 LOC102724428A0A0B4J2F2 783 aa15.06■□□□□ 0
VIL1-202ENST00000392114 ATP6V1AP38606 617 aa15.06■□□□□ 0
VIL1-202ENST00000392114 RGS3P49796 1198 aa15.06■□□□□ 0
VIL1-202ENST00000392114 SIK1P57059 783 aa15.06■□□□□ 0
VIL1-202ENST00000392114 MYD88Q99836 296 aa15.06■□□□□ 0
VIL1-202ENST00000392114 GRM8O00222 908 aa15.05■□□□□ 0
VIL1-202ENST00000392114 HMGB2P26583 209 aaKnown RBP15.05■□□□□ 0
VIL1-202ENST00000392114 CHD1LQ86WJ1 897 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms