RNA–Protein interactions for RNA: ENST00000390457.2

TRAV27-201, Transcript of T cell receptor alpha variable 27, humanhuman

APPRIS P1 BASIC

Gene TRAV27, Length 425 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27-201ENST00000390457 IL13P35225 146 aa9.64□□□□□ -0.87
TRAV27-201ENST00000390457 APLP1P51693 650 aa9.64□□□□□ -0.87
TRAV27-201ENST00000390457 TJP1Q07157 1748 aa9.64□□□□□ -0.87
TRAV27-201ENST00000390457 SCN11AQ9UI33 1791 aa9.63□□□□□ -0.87
TRAV27-201ENST00000390457 POLRMTO00411 1230 aaKnown RBP9.63□□□□□ -0.87
TRAV27-201ENST00000390457 C9orf131Q5VYM1 1079 aa9.63□□□□□ -0.87
TRAV27-201ENST00000390457 SULT6B1Q6IMI4 303 aa9.63□□□□□ -0.87
TRAV27-201ENST00000390457 PIM2Q9P1W9 311 aa9.63□□□□□ -0.87
TRAV27-201ENST00000390457 SBF1O95248 1867 aa9.62□□□□□ -0.87
TRAV27-201ENST00000390457 EIF4G2P78344 907 aaKnown RBP eCLIP9.62□□□□□ -0.87
TRAV27-201ENST00000390457 EVX2Q03828 476 aa9.62□□□□□ -0.87
TRAV27-201ENST00000390457 C1orf141Q5JVX7 400 aa9.62□□□□□ -0.87
TRAV27-201ENST00000390457 RBM46Q8TBY0 533 aaKnown RBP9.62□□□□□ -0.87
TRAV27-201ENST00000390457 POLR3GLQ9BT43 218 aa9.62□□□□□ -0.87
TRAV27-201ENST00000390457 SOS1Q07889 1333 aaPredicted RBP9.61□□□□□ -0.87
TRAV27-201ENST00000390457 CYP19A1P11511 503 aaPredicted RBP9.61□□□□□ -0.87
TRAV27-201ENST00000390457 CHRNA5P30532 468 aa9.61□□□□□ -0.87
TRAV27-201ENST00000390457 DALRD3Q5D0E6 543 aaKnown RBP9.61□□□□□ -0.87
TRAV27-201ENST00000390457 AKAP4Q5JQC9 854 aa9.61□□□□□ -0.87
TRAV27-201ENST00000390457 AMER1Q5JTC6 1135 aaPredicted RBP9.61□□□□□ -0.87
TRAV27-201ENST00000390457 MORC1Q86VD1 984 aa9.61□□□□□ -0.87
TRAV27-201ENST00000390457 DNAJC10Q8IXB1 793 aa9.61□□□□□ -0.87
TRAV27-201ENST00000390457 SLC52A2Q9HAB3 445 aa9.61□□□□□ -0.87
TRAV27-201ENST00000390457 BCL2L12Q9HB09 334 aa9.61□□□□□ -0.87
TRAV27-201ENST00000390457 LGR6Q9HBX8 967 aa9.61□□□□□ -0.87
TRAV27-201ENST00000390457 MRC1P22897 1456 aa9.6□□□□□ -0.87
TRAV27-201ENST00000390457 NRXN2Q9P2S2 1712 aa9.6□□□□□ -0.87
TRAV27-201ENST00000390457 KCPQ6ZWJ8 1503 aa9.6□□□□□ -0.87
TRAV27-201ENST00000390457 AFDNP55196 1824 aaKnown RBP9.59□□□□□ -0.87
TRAV27-201ENST00000390457 RNMTO43148 476 aaKnown RBP9.59□□□□□ -0.87
TRAV27-201ENST00000390457 PRELPP51888 382 aa9.59□□□□□ -0.87
TRAV27-201ENST00000390457 FSTL1Q12841 308 aa9.59□□□□□ -0.87
TRAV27-201ENST00000390457 NFIXQ14938 502 aa9.59□□□□□ -0.87
TRAV27-201ENST00000390457 USPL1Q5W0Q7 1092 aa9.59□□□□□ -0.87
TRAV27-201ENST00000390457 JMYQ8N9B5 988 aa9.59□□□□□ -0.87
TRAV27-201ENST00000390457 RNF181Q9P0P0 153 aa9.59□□□□□ -0.87
TRAV27-201ENST00000390457 NARFQ9UHQ1 456 aa9.59□□□□□ -0.87
TRAV27-201ENST00000390457 WDR90Q96KV7 1748 aa9.59□□□□□ -0.87
TRAV27-201ENST00000390457 PER1O15534 1290 aaPredicted RBP9.58□□□□□ -0.88
TRAV27-201ENST00000390457 HTRA3P83110 453 aa9.58□□□□□ -0.88
TRAV27-201ENST00000390457 SLC39A6Q13433 755 aa9.58□□□□□ -0.88
TRAV27-201ENST00000390457 VSIG10Q8N0Z9 540 aa9.58□□□□□ -0.88
TRAV27-201ENST00000390457 KLRG1Q96E93 195 aa9.58□□□□□ -0.88
TRAV27-201ENST00000390457 ZBTB1Q9Y2K1 713 aa9.58□□□□□ -0.88
TRAV27-201ENST00000390457 KNSTRNQ9Y448 316 aa9.58□□□□□ -0.88
TRAV27-201ENST00000390457 KDM2BQ8NHM5 1336 aa9.57□□□□□ -0.88
TRAV27-201ENST00000390457 ZC3H4Q9UPT8 1303 aaKnown RBP9.57□□□□□ -0.88
TRAV27-201ENST00000390457 ZPR1O75312 459 aa9.57□□□□□ -0.88
TRAV27-201ENST00000390457 MTHFSDQ2M296 383 aaKnown RBP9.57□□□□□ -0.88
TRAV27-201ENST00000390457 RRAGCQ9HB90 399 aa9.57□□□□□ -0.88
TRAV27-201ENST00000390457 VIRMAQ69YN4 1812 aaKnown RBP9.56□□□□□ -0.88
TRAV27-201ENST00000390457 UBR2Q8IWV8 1755 aa9.56□□□□□ -0.88
TRAV27-201ENST00000390457 COL15A1P39059 1388 aa9.56□□□□□ -0.88
TRAV27-201ENST00000390457 SERPINB2P05120 415 aa9.56□□□□□ -0.88
TRAV27-201ENST00000390457 EIF5P55010 431 aaKnown RBP9.56□□□□□ -0.88
TRAV27-201ENST00000390457 RASSF7Q02833 373 aa9.56□□□□□ -0.88
TRAV27-201ENST00000390457 DLEC1Q9Y238 1755 aa9.55□□□□□ -0.88
TRAV27-201ENST00000390457 TNRC6CQ9HCJ0 1690 aaKnown RBP9.55□□□□□ -0.88
TRAV27-201ENST00000390457 CARMIL3Q8ND23 1372 aa9.55□□□□□ -0.88
TRAV27-201ENST00000390457 GLTPD2A6NH11 291 aa9.55□□□□□ -0.88
TRAV27-201ENST00000390457 POTECB2RU33 542 aa9.55□□□□□ -0.88
TRAV27-201ENST00000390457 NFKBIEO00221 500 aa9.55□□□□□ -0.88
TRAV27-201ENST00000390457 HMOX1P09601 288 aa9.55□□□□□ -0.88
TRAV27-201ENST00000390457 LMNB1P20700 586 aa9.55□□□□□ -0.88
TRAV27-201ENST00000390457 LHX8Q68G74 356 aa9.55□□□□□ -0.88
TRAV27-201ENST00000390457 PCGF6Q9BYE7 350 aa9.55□□□□□ -0.88
TRAV27-201ENST00000390457 C16orf71Q8IYS4 520 aaPredicted RBP9.54□□□□□ -0.88
TRAV27-201ENST00000390457 TTLL6Q8N841 843 aa9.54□□□□□ -0.88
TRAV27-201ENST00000390457 IL17REQ8NFR9 667 aa9.54□□□□□ -0.88
TRAV27-201ENST00000390457 KIF7Q2M1P5 1343 aa9.54□□□□□ -0.88
TRAV27-201ENST00000390457 COL3A1P02461 1466 aaPredicted RBP9.53□□□□□ -0.88
TRAV27-201ENST00000390457 VEGFAP15692 232 aaPredicted RBP9.53□□□□□ -0.88
TRAV27-201ENST00000390457 COL13A1Q5TAT6 717 aaPredicted RBP9.53□□□□□ -0.88
TRAV27-201ENST00000390457 SMC1BQ8NDV3 1235 aa9.53□□□□□ -0.88
TRAV27-201ENST00000390457 RTN4Q9NQC3 1192 aaKnown RBP9.53□□□□□ -0.88
TRAV27-201ENST00000390457 CCDC88AQ3V6T2 1871 aa9.53□□□□□ -0.88
TRAV27-201ENST00000390457 ANKRD31Q8N7Z5 1873 aa9.53□□□□□ -0.88
TRAV27-201ENST00000390457 DIAPH1O60610 1272 aaKnown RBP9.52□□□□□ -0.89
TRAV27-201ENST00000390457 CANXP27824 592 aaKnown RBP9.52□□□□□ -0.89
TRAV27-201ENST00000390457 TBC1D9BQ66K14 1250 aa9.52□□□□□ -0.89
TRAV27-201ENST00000390457 C2CD5Q86YS7 1000 aa9.52□□□□□ -0.89
TRAV27-201ENST00000390457 ZNF496Q96IT1 587 aaPredicted RBP9.52□□□□□ -0.89
TRAV27-201ENST00000390457 NPC1L1Q9UHC9 1359 aa9.51□□□□□ -0.89
TRAV27-201ENST00000390457 HEG1Q9ULI3 1381 aa9.51□□□□□ -0.89
TRAV27-201ENST00000390457 SIPA1L3O60292 1781 aaPredicted RBP9.51□□□□□ -0.89
TRAV27-201ENST00000390457 H0YIN7 160 aa9.51□□□□□ -0.89
TRAV27-201ENST00000390457 STARD3NLO95772 234 aa9.51□□□□□ -0.89
TRAV27-201ENST00000390457 PRR5LQ6MZQ0 368 aa9.51□□□□□ -0.89
TRAV27-201ENST00000390457 ZNF790Q6PG37 636 aa9.51□□□□□ -0.89
TRAV27-201ENST00000390457 BRIP1Q9BX63 1249 aa9.51□□□□□ -0.89
TRAV27-201ENST00000390457 FER1L6Q2WGJ9 1857 aa9.51□□□□□ -0.89
TRAV27-201ENST00000390457 CEMIPQ8WUJ3 1361 aa9.5□□□□□ -0.89
TRAV27-201ENST00000390457 A0A087WZG4 1122 aa9.5□□□□□ -0.89
TRAV27-201ENST00000390457 CAMTA2O94983 1202 aa9.5□□□□□ -0.89
TRAV27-201ENST00000390457 IL6STP40189 918 aaPredicted RBP9.5□□□□□ -0.89
TRAV27-201ENST00000390457 PDZRN3Q9UPQ7 1066 aa9.5□□□□□ -0.89
TRAV27-201ENST00000390457 DICER1Q9UPY3 1922 aaKnown RBP9.5□□□□□ -0.89
TRAV27-201ENST00000390457 LTBP3Q9NS15 1303 aa9.5□□□□□ -0.89
TRAV27-201ENST00000390457 SCN7AQ01118 1682 aa9.49□□□□□ -0.89
TRAV27-201ENST00000390457 COL11A2P13942 1736 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms