RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 TRMT112Q9UI30 125 aaKnown RBP17.5■□□□□ 0.39
SNPH-202ENST00000381873 MAGI2Q86UL8 1455 aa17.5■□□□□ 0.39
SNPH-202ENST00000381873 ZNF76P36508 570 aa17.5■□□□□ 0.39
SNPH-202ENST00000381873 BCL11BQ9C0K0 894 aaPredicted RBP17.5■□□□□ 0.39
SNPH-202ENST00000381873 IL16Q14005 1332 aa17.49■□□□□ 0.39
SNPH-202ENST00000381873 DEF6Q9H4E7 631 aa17.49■□□□□ 0.39
SNPH-202ENST00000381873 HYPKQ9NX55 129 aa17.49■□□□□ 0.39
SNPH-202ENST00000381873 ACEP12821 1306 aa17.49■□□□□ 0.39
SNPH-202ENST00000381873 TRPM2O94759 1503 aa17.49■□□□□ 0.39
SNPH-202ENST00000381873 CASTP20810 708 aaKnown RBP17.49■□□□□ 0.39
SNPH-202ENST00000381873 USP5P45974 858 aa17.49■□□□□ 0.39
SNPH-202ENST00000381873 SPC24Q8NBT2 197 aa17.49■□□□□ 0.39
SNPH-202ENST00000381873 KRT28Q7Z3Y7 464 aa17.48■□□□□ 0.39
SNPH-202ENST00000381873 NAPBQ9H115 298 aa17.48■□□□□ 0.39
SNPH-202ENST00000381873 MINDY4BA8MYZ0 360 aa17.48■□□□□ 0.39
SNPH-202ENST00000381873 MAP3K12Q12852 859 aa17.48■□□□□ 0.39
SNPH-202ENST00000381873 CEP57L1Q8IYX8 460 aa17.48■□□□□ 0.39
SNPH-202ENST00000381873 PIBF1Q8WXW3 757 aa17.48■□□□□ 0.39
SNPH-202ENST00000381873 DDX11Q96FC9 970 aa17.48■□□□□ 0.39
SNPH-202ENST00000381873 MKNK2Q9HBH9 465 aa17.48■□□□□ 0.39
SNPH-202ENST00000381873 F6X3S4 739 aa17.48■□□□□ 0.39
SNPH-202ENST00000381873 POLR3DP05423 398 aaPredicted RBP17.48■□□□□ 0.39
SNPH-202ENST00000381873 A0A087WZG4 1122 aa17.47■□□□□ 0.39
SNPH-202ENST00000381873 MAGI3Q5TCQ9 1506 aa17.47■□□□□ 0.39
SNPH-202ENST00000381873 MPHOSPH10O00566 681 aaKnown RBP17.47■□□□□ 0.39
SNPH-202ENST00000381873 HMGN5P82970 282 aaKnown RBP17.47■□□□□ 0.39
SNPH-202ENST00000381873 CRACR2BQ8N4Y2 399 aaPredicted RBP17.47■□□□□ 0.39
SNPH-202ENST00000381873 UPF3BQ9BZI7 483 aaKnown RBP17.47■□□□□ 0.39
SNPH-202ENST00000381873 ANKIB1Q9P2G1 1089 aa17.47■□□□□ 0.39
SNPH-202ENST00000381873 CCDC196A0A1B0GTZ2 297 aa17.47■□□□□ 0.39
SNPH-202ENST00000381873 CHD1O14646 1710 aa17.47■□□□□ 0.39
SNPH-202ENST00000381873 NOM1Q5C9Z4 860 aaKnown RBP17.46■□□□□ 0.39
SNPH-202ENST00000381873 TXLNBQ8N3L3 684 aa17.46■□□□□ 0.39
SNPH-202ENST00000381873 NUP62CLQ9H1M0 184 aa17.46■□□□□ 0.39
SNPH-202ENST00000381873 NPHP3Q7Z494 1330 aa17.46■□□□□ 0.39
SNPH-202ENST00000381873 NKTRP30414 1462 aaKnown RBP17.46■□□□□ 0.39
SNPH-202ENST00000381873 DZIP1Q86YF9 867 aaKnown RBP17.46■□□□□ 0.38
SNPH-202ENST00000381873 CBFA2T2O43439 604 aa17.45■□□□□ 0.38
SNPH-202ENST00000381873 IFNL2Q8IZJ0 200 aa17.45■□□□□ 0.38
SNPH-202ENST00000381873 TEX13AQ9BXU3 409 aaPredicted RBP17.45■□□□□ 0.38
SNPH-202ENST00000381873 PPIP5K1Q6PFW1 1433 aa17.45■□□□□ 0.38
SNPH-202ENST00000381873 PRPF40BQ6NWY9 871 aaKnown RBP17.45■□□□□ 0.38
SNPH-202ENST00000381873 SMARCA5O60264 1052 aaPredicted RBP17.45■□□□□ 0.38
SNPH-202ENST00000381873 MBD5Q9P267 1494 aa17.44■□□□□ 0.38
SNPH-202ENST00000381873 ZFYVE9O95405 1425 aa17.44■□□□□ 0.38
SNPH-202ENST00000381873 ANKRD18BA2A2Z9 1011 aa17.44■□□□□ 0.38
SNPH-202ENST00000381873 FLIIQ13045 1269 aa17.44■□□□□ 0.38
SNPH-202ENST00000381873 CCDC8Q9H0W5 538 aaPredicted RBP17.44■□□□□ 0.38
SNPH-202ENST00000381873 CEP131Q9UPN4 1083 aa17.44■□□□□ 0.38
SNPH-202ENST00000381873 SLC5A1P13866 664 aa17.44■□□□□ 0.38
SNPH-202ENST00000381873 LRRFIP2Q9Y608 721 aaKnown RBP17.44■□□□□ 0.38
SNPH-202ENST00000381873 YTHDC2Q9H6S0 1430 aaKnown RBP17.44■□□□□ 0.38
SNPH-202ENST00000381873 FERMT3Q86UX7 667 aa17.44■□□□□ 0.38
SNPH-202ENST00000381873 CTCFLQ8NI51 663 aaPredicted RBP17.43■□□□□ 0.38
SNPH-202ENST00000381873 IQCA1Q86XH1 822 aa17.43■□□□□ 0.38
SNPH-202ENST00000381873 ZBTB3Q9H5J0 574 aa17.43■□□□□ 0.38
SNPH-202ENST00000381873 SEC63Q9UGP8 760 aaKnown RBP17.43■□□□□ 0.38
SNPH-202ENST00000381873 MLH3Q9UHC1 1453 aa17.43■□□□□ 0.38
SNPH-202ENST00000381873 MCM4P33991 863 aa17.42■□□□□ 0.38
SNPH-202ENST00000381873 ARAP3Q8WWN8 1544 aa17.42■□□□□ 0.38
SNPH-202ENST00000381873 POLR3AO14802 1390 aaPredicted RBP17.42■□□□□ 0.38
SNPH-202ENST00000381873 ERLIN2O94905 339 aa17.42■□□□□ 0.38
SNPH-202ENST00000381873 GPTP24298 496 aa17.42■□□□□ 0.38
SNPH-202ENST00000381873 MTERF4Q7Z6M4 381 aaKnown RBP17.42■□□□□ 0.38
SNPH-202ENST00000381873 VSIG10Q8N0Z9 540 aa17.42■□□□□ 0.38
SNPH-202ENST00000381873 NPC1L1Q9UHC9 1359 aa17.41■□□□□ 0.38
SNPH-202ENST00000381873 CCDC83Q8IWF9 413 aa17.41■□□□□ 0.38
SNPH-202ENST00000381873 RPGRQ92834 1020 aaKnown RBP17.41■□□□□ 0.38
SNPH-202ENST00000381873 HMGB1P09429 215 aaKnown RBP17.41■□□□□ 0.38
SNPH-202ENST00000381873 ZNF444Q8N0Y2 327 aaPredicted RBP17.41■□□□□ 0.38
SNPH-202ENST00000381873 PTPRCP08575 1304 aa17.41■□□□□ 0.38
SNPH-202ENST00000381873 ABCC1P33527 1531 aa17.41■□□□□ 0.38
SNPH-202ENST00000381873 PREX2Q70Z35 1606 aa17.41■□□□□ 0.38
SNPH-202ENST00000381873 PARD3Q8TEW0 1356 aa17.41■□□□□ 0.38
SNPH-202ENST00000381873 RNF41Q9H4P4 317 aaPredicted RBP17.41■□□□□ 0.38
SNPH-202ENST00000381873 RANBP6O60518 1105 aaKnown RBP17.4■□□□□ 0.38
SNPH-202ENST00000381873 LDHAL6AQ6ZMR3 332 aa17.4■□□□□ 0.38
SNPH-202ENST00000381873 FILIP1Q7Z7B0 1213 aa17.4■□□□□ 0.38
SNPH-202ENST00000381873 SLF2Q8IX21 1173 aa17.4■□□□□ 0.38
SNPH-202ENST00000381873 SH2B1Q9NRF2 756 aaPredicted RBP17.4■□□□□ 0.38
SNPH-202ENST00000381873 SMTNL1A8MU46 457 aa17.4■□□□□ 0.38
SNPH-202ENST00000381873 ZNF213O14771 459 aa17.4■□□□□ 0.38
SNPH-202ENST00000381873 CCDC181Q5TID7 509 aa17.4■□□□□ 0.38
SNPH-202ENST00000381873 SIRT1Q96EB6 747 aa17.4■□□□□ 0.38
SNPH-202ENST00000381873 TESK2Q96S53 571 aa17.4■□□□□ 0.38
SNPH-202ENST00000381873 KDM5DQ9BY66 1539 aa17.4■□□□□ 0.38
SNPH-202ENST00000381873 C19orf44Q9H6X5 657 aa17.4■□□□□ 0.38
SNPH-202ENST00000381873 PIK3C2GO75747 1445 aa17.39■□□□□ 0.37
SNPH-202ENST00000381873 COL17A1Q9UMD9 1497 aaPredicted RBP17.39■□□□□ 0.37
SNPH-202ENST00000381873 C6orf229H3BNL8 230 aa17.39■□□□□ 0.37
SNPH-202ENST00000381873 WDHD1O75717 1129 aaPredicted RBP17.39■□□□□ 0.37
SNPH-202ENST00000381873 MPNDQ8N594 471 aa17.39■□□□□ 0.37
SNPH-202ENST00000381873 MAP7D2Q96T17 732 aa17.39■□□□□ 0.37
SNPH-202ENST00000381873 ECHDC1Q9NTX5 307 aa17.39■□□□□ 0.37
SNPH-202ENST00000381873 TNIP1Q15025 636 aa17.39■□□□□ 0.37
SNPH-202ENST00000381873 MAP3K11Q16584 847 aa17.39■□□□□ 0.37
SNPH-202ENST00000381873 CDC5LQ99459 802 aaKnown RBP17.39■□□□□ 0.37
SNPH-202ENST00000381873 SCAND2PQ9GZW5 306 aaPredicted RBP17.39■□□□□ 0.37
SNPH-202ENST00000381873 NPATQ14207 1427 aa17.39■□□□□ 0.37
SNPH-202ENST00000381873 EIF5P55010 431 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms