RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 ACSBG1Q96GR2 724 aa10.13□□□□□ -0.79
ERCC8-202ENST00000381118 C1orf115Q9H7X2 142 aa10.13□□□□□ -0.79
ERCC8-202ENST00000381118 DBF4Q9UBU7 674 aaPredicted RBP10.13□□□□□ -0.79
ERCC8-202ENST00000381118 USP16Q9Y5T5 823 aa10.13□□□□□ -0.79
ERCC8-202ENST00000381118 LAMB4A4D0S4 1761 aa10.13□□□□□ -0.79
ERCC8-202ENST00000381118 GLI3P10071 1580 aa10.13□□□□□ -0.79
ERCC8-202ENST00000381118 IGHDP01880 384 aa10.13□□□□□ -0.79
ERCC8-202ENST00000381118 SNRPA1P09661 255 aaKnown RBP10.13□□□□□ -0.79
ERCC8-202ENST00000381118 MYL6BP14649 208 aa10.13□□□□□ -0.79
ERCC8-202ENST00000381118 SKAP1Q86WV1 359 aa10.13□□□□□ -0.79
ERCC8-202ENST00000381118 MARCH10Q8NA82 808 aaPredicted RBP10.13□□□□□ -0.79
ERCC8-202ENST00000381118 EP400Q96L91 3159 aa10.13□□□□□ -0.79
ERCC8-202ENST00000381118 ZBTB7BO15156 539 aaPredicted RBP10.12□□□□□ -0.79
ERCC8-202ENST00000381118 ZBTB40Q9NUA8 1239 aa10.12□□□□□ -0.79
ERCC8-202ENST00000381118 ASAP1Q9ULH1 1129 aa10.12□□□□□ -0.79
ERCC8-202ENST00000381118 KCPQ6ZWJ8 1503 aa10.12□□□□□ -0.79
ERCC8-202ENST00000381118 KDM2BQ8NHM5 1336 aa10.12□□□□□ -0.79
ERCC8-202ENST00000381118 PRIM1P49642 420 aaKnown RBP10.11□□□□□ -0.79
ERCC8-202ENST00000381118 AIMP1Q12904 312 aaKnown RBP10.11□□□□□ -0.79
ERCC8-202ENST00000381118 CENPQQ7L2Z9 268 aaPredicted RBP10.11□□□□□ -0.79
ERCC8-202ENST00000381118 CHMP4AQ9BY43 222 aa10.11□□□□□ -0.79
ERCC8-202ENST00000381118 AAMPQ13685 434 aa10.11□□□□□ -0.79
ERCC8-202ENST00000381118 INTS3Q68E01 1043 aaKnown RBP10.11□□□□□ -0.79
ERCC8-202ENST00000381118 RBM42Q9BTD8 480 aaKnown RBP10.11□□□□□ -0.79
ERCC8-202ENST00000381118 PI4KAP2A4QPH2 592 aa10.1□□□□□ -0.79
ERCC8-202ENST00000381118 PI4KAP1Q8N8J0 262 aa10.1□□□□□ -0.79
ERCC8-202ENST00000381118 N4BP2Q86UW6 1770 aaPredicted RBP10.1□□□□□ -0.79
ERCC8-202ENST00000381118 BCL9O00512 1426 aa10.1□□□□□ -0.79
ERCC8-202ENST00000381118 PDIA6Q15084 440 aa10.1□□□□□ -0.79
ERCC8-202ENST00000381118 FAM182BQ5T319 152 aa10.1□□□□□ -0.79
ERCC8-202ENST00000381118 GJD4Q96KN9 370 aaPredicted RBP10.1□□□□□ -0.79
ERCC8-202ENST00000381118 DDX21Q9NR30 783 aaKnown RBP eCLIP10.1□□□□□ -0.79
ERCC8-202ENST00000381118 ATG3Q9NT62 314 aa10.1□□□□□ -0.79
ERCC8-202ENST00000381118 MEIS3Q99687 375 aa10.09□□□□□ -0.79
ERCC8-202ENST00000381118 HYPKQ9NX55 129 aa10.09□□□□□ -0.79
ERCC8-202ENST00000381118 CCT4P50991 539 aaKnown RBP10.09□□□□□ -0.79
ERCC8-202ENST00000381118 PPP4R3CPQ6ZMV5 832 aa10.09□□□□□ -0.79
ERCC8-202ENST00000381118 CHMP4BQ9H444 224 aaKnown RBP10.09□□□□□ -0.79
ERCC8-202ENST00000381118 THSD7AQ9UPZ6 1657 aa10.08□□□□□ -0.8
ERCC8-202ENST00000381118 ADCY9O60503 1353 aa10.08□□□□□ -0.8
ERCC8-202ENST00000381118 RWDD1Q9H446 243 aaPredicted RBP10.08□□□□□ -0.8
ERCC8-202ENST00000381118 TRPC5Q9UL62 973 aaPredicted RBP10.08□□□□□ -0.8
ERCC8-202ENST00000381118 MAP3K2Q9Y2U5 619 aa10.08□□□□□ -0.8
ERCC8-202ENST00000381118 KCNQ2O43526 872 aa10.07□□□□□ -0.8
ERCC8-202ENST00000381118 A1BGP04217 495 aa10.07□□□□□ -0.8
ERCC8-202ENST00000381118 COPS6Q7L5N1 327 aa10.07□□□□□ -0.8
ERCC8-202ENST00000381118 XAGE3Q8WTP9 111 aa10.07□□□□□ -0.8
ERCC8-202ENST00000381118 DNAAF4Q8WXU2 420 aa10.07□□□□□ -0.8
ERCC8-202ENST00000381118 QTRT2Q9H974 415 aaKnown RBP10.07□□□□□ -0.8
ERCC8-202ENST00000381118 ZNF330Q9Y3S2 320 aaPredicted RBP10.07□□□□□ -0.8
ERCC8-202ENST00000381118 PXDNLA1KZ92 1463 aa10.07□□□□□ -0.8
ERCC8-202ENST00000381118 ATRNO75882 1429 aa10.06□□□□□ -0.8
ERCC8-202ENST00000381118 KSR2Q6VAB6 950 aa10.06□□□□□ -0.8
ERCC8-202ENST00000381118 RIC3Q7Z5B4 369 aa10.06□□□□□ -0.8
ERCC8-202ENST00000381118 DNAJC10Q8IXB1 793 aa10.06□□□□□ -0.8
ERCC8-202ENST00000381118 SRCIN1Q9C0H9 1055 aa10.06□□□□□ -0.8
ERCC8-202ENST00000381118 AFDNP55196 1824 aaKnown RBP10.06□□□□□ -0.8
ERCC8-202ENST00000381118 ARFGEF2Q9Y6D5 1785 aa10.06□□□□□ -0.8
ERCC8-202ENST00000381118 NBPF26B4DH59 902 aa10.06□□□□□ -0.8
ERCC8-202ENST00000381118 DDX58O95786 925 aaKnown RBP10.06□□□□□ -0.8
ERCC8-202ENST00000381118 RGS3P49796 1198 aa10.06□□□□□ -0.8
ERCC8-202ENST00000381118 NBPF14Q5TI25 921 aa10.06□□□□□ -0.8
ERCC8-202ENST00000381118 NBPF10Q6P3W6 841 aaKnown RBP10.06□□□□□ -0.8
ERCC8-202ENST00000381118 NBPF15Q8N660 670 aa10.06□□□□□ -0.8
ERCC8-202ENST00000381118 SLC4A9Q96Q91 983 aa10.06□□□□□ -0.8
ERCC8-202ENST00000381118 CWF19L2Q2TBE0 894 aaKnown RBP10.05□□□□□ -0.8
ERCC8-202ENST00000381118 BEND3Q5T5X7 828 aa10.05□□□□□ -0.8
ERCC8-202ENST00000381118 LRP10Q7Z4F1 713 aa10.05□□□□□ -0.8
ERCC8-202ENST00000381118 TJP1Q07157 1748 aa10.05□□□□□ -0.8
ERCC8-202ENST00000381118 HDAC1Q13547 482 aaPredicted RBP10.05□□□□□ -0.8
ERCC8-202ENST00000381118 SIRT2Q8IXJ6 389 aa10.05□□□□□ -0.8
ERCC8-202ENST00000381118 SEPT12Q8IYM1 358 aa10.05□□□□□ -0.8
ERCC8-202ENST00000381118 BRWD3Q6RI45 1802 aa10.04□□□□□ -0.8
ERCC8-202ENST00000381118 ANKRD13DQ6ZTN6 518 aa10.04□□□□□ -0.8
ERCC8-202ENST00000381118 PTF1AQ7RTS3 328 aa10.04□□□□□ -0.8
ERCC8-202ENST00000381118 VSIG10Q8N0Z9 540 aa10.04□□□□□ -0.8
ERCC8-202ENST00000381118 ARXQ96QS3 562 aa10.04□□□□□ -0.8
ERCC8-202ENST00000381118 USP44Q9H0E7 712 aa10.04□□□□□ -0.8
ERCC8-202ENST00000381118 BTAF1O14981 1849 aa10.04□□□□□ -0.8
ERCC8-202ENST00000381118 SBF2Q86WG5 1849 aa10.04□□□□□ -0.8
ERCC8-202ENST00000381118 NBPF7P0C2Y1 421 aaPredicted RBP10.03□□□□□ -0.8
ERCC8-202ENST00000381118 CEP85Q6P2H3 762 aa10.03□□□□□ -0.8
ERCC8-202ENST00000381118 MYD88Q99836 296 aa10.03□□□□□ -0.8
ERCC8-202ENST00000381118 BCL11AQ9H165 835 aa10.03□□□□□ -0.8
ERCC8-202ENST00000381118 ATP10DQ9P241 1426 aa10.03□□□□□ -0.8
ERCC8-202ENST00000381118 PALLDQ8WX93 1383 aa10.03□□□□□ -0.8
ERCC8-202ENST00000381118 STARD3NLO95772 234 aa10.03□□□□□ -0.8
ERCC8-202ENST00000381118 GNAI2P04899 355 aa10.03□□□□□ -0.8
ERCC8-202ENST00000381118 GNAI3P08754 354 aa10.03□□□□□ -0.8
ERCC8-202ENST00000381118 UBTFL1P0CB47 393 aaPredicted RBP10.03□□□□□ -0.8
ERCC8-202ENST00000381118 ATP6V1AP38606 617 aa10.03□□□□□ -0.8
ERCC8-202ENST00000381118 TTLL7Q6ZT98 887 aa10.03□□□□□ -0.8
ERCC8-202ENST00000381118 TEX13AQ9BXU3 409 aaPredicted RBP10.03□□□□□ -0.8
ERCC8-202ENST00000381118 PDZRN3Q9UPQ7 1066 aa10.03□□□□□ -0.8
ERCC8-202ENST00000381118 LRRFIP2Q9Y608 721 aaKnown RBP10.03□□□□□ -0.8
ERCC8-202ENST00000381118 NUP188Q5SRE5 1749 aa10.03□□□□□ -0.8
ERCC8-202ENST00000381118 ERBB4Q15303 1308 aa10.02□□□□□ -0.8
ERCC8-202ENST00000381118 NEXNQ0ZGT2 675 aa10.02□□□□□ -0.81
ERCC8-202ENST00000381118 ZBTB3Q9H5J0 574 aa10.02□□□□□ -0.81
ERCC8-202ENST00000381118 C9orf78Q9NZ63 289 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms