RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 A0A0G2JS52 829 aa14.35□□□□□ -0.11
PITRM1-202ENST00000380989 PIP4K2AP48426 406 aaPredicted RBP14.34□□□□□ -0.11
PITRM1-202ENST00000380989 MVPQ14764 893 aaKnown RBP14.34□□□□□ -0.11
PITRM1-202ENST00000380989 ATF7IPQ6VMQ6 1270 aa14.34□□□□□ -0.11
PITRM1-202ENST00000380989 TMEM57Q8N5G2 664 aa14.34□□□□□ -0.11
PITRM1-202ENST00000380989 HSP90AB1P08238 724 aaKnown RBP14.34□□□□□ -0.11
PITRM1-202ENST00000380989 EIF4A1P60842 406 aaKnown RBP14.34□□□□□ -0.11
PITRM1-202ENST00000380989 ZNF428Q96B54 188 aa14.34□□□□□ -0.11
PITRM1-202ENST00000380989 GLIPR1L2Q4G1C9 344 aa14.34□□□□□ -0.11
PITRM1-202ENST00000380989 SLC52A2Q9HAB3 445 aa14.34□□□□□ -0.11
PITRM1-202ENST00000380989 JCADQ9P266 1359 aa14.33□□□□□ -0.11
PITRM1-202ENST00000380989 CT47B1P0C2W7 299 aaPredicted RBP14.33□□□□□ -0.12
PITRM1-202ENST00000380989 DZIP1LQ8IYY4 767 aaKnown RBP14.33□□□□□ -0.12
PITRM1-202ENST00000380989 FAM13BQ9NYF5 915 aa14.33□□□□□ -0.12
PITRM1-202ENST00000380989 F6X3S4 739 aa14.32□□□□□ -0.12
PITRM1-202ENST00000380989 ALDH1L2Q3SY69 923 aa14.32□□□□□ -0.12
PITRM1-202ENST00000380989 CABP4P57796 275 aa14.32□□□□□ -0.12
PITRM1-202ENST00000380989 FAM98CQ17RN3 349 aaKnown RBP14.32□□□□□ -0.12
PITRM1-202ENST00000380989 DCAF5Q96JK2 942 aa14.32□□□□□ -0.12
PITRM1-202ENST00000380989 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.32□□□□□ -0.129e-8■■□□□ 14
PITRM1-202ENST00000380989 PCDH11XQ9BZA7 1347 aa14.32□□□□□ -0.12
PITRM1-202ENST00000380989 PCDH11YQ9BZA8 1340 aa14.32□□□□□ -0.12
PITRM1-202ENST00000380989 PHAXQ9H814 394 aaKnown RBP14.31□□□□□ -0.12
PITRM1-202ENST00000380989 PKD1L3Q7Z443 1732 aa14.31□□□□□ -0.12
PITRM1-202ENST00000380989 FAM182BQ5T319 152 aa14.31□□□□□ -0.12
PITRM1-202ENST00000380989 SYTL4Q96C24 671 aaPredicted RBP14.31□□□□□ -0.12
PITRM1-202ENST00000380989 SPATA31A1Q5TZJ5 1347 aa14.31□□□□□ -0.12
PITRM1-202ENST00000380989 RRP9O43818 475 aaKnown RBP14.31□□□□□ -0.12
PITRM1-202ENST00000380989 HDGFL1Q5TGJ6 251 aa14.31□□□□□ -0.12
PITRM1-202ENST00000380989 MEX3CQ5U5Q3 659 aaKnown RBP14.31□□□□□ -0.12
PITRM1-202ENST00000380989 SHANK3Q9BYB0 1731 aa14.3□□□□□ -0.12
PITRM1-202ENST00000380989 ZNF790Q6PG37 636 aa14.3□□□□□ -0.12
PITRM1-202ENST00000380989 ZNF496Q96IT1 587 aaPredicted RBP14.3□□□□□ -0.12
PITRM1-202ENST00000380989 PRDM10Q9NQV6 1147 aa14.3□□□□□ -0.12
PITRM1-202ENST00000380989 PTCD1O75127 700 aaKnown RBP14.3□□□□□ -0.12
PITRM1-202ENST00000380989 KIF2CQ99661 725 aa14.3□□□□□ -0.12
PITRM1-202ENST00000380989 PARP4Q9UKK3 1724 aaKnown RBP14.3□□□□□ -0.12
PITRM1-202ENST00000380989 SCN11AQ9UI33 1791 aa14.3□□□□□ -0.12
PITRM1-202ENST00000380989 PROSER3Q2NL68 480 aa14.29□□□□□ -0.12
PITRM1-202ENST00000380989 FOXD4L6Q3SYB3 417 aaPredicted RBP14.29□□□□□ -0.12
PITRM1-202ENST00000380989 FOXD4L3Q6VB84 417 aaPredicted RBP14.29□□□□□ -0.12
PITRM1-202ENST00000380989 CHPF2Q9P2E5 772 aa14.29□□□□□ -0.12
PITRM1-202ENST00000380989 APBB1O00213 710 aa14.29□□□□□ -0.12
PITRM1-202ENST00000380989 RBM27Q9P2N5 1060 aaKnown RBP14.29□□□□□ -0.12
PITRM1-202ENST00000380989 R3HCC1Q9Y3T6 440 aaKnown RBP14.29□□□□□ -0.12
PITRM1-202ENST00000380989 KIF16BQ96L93 1317 aa14.29□□□□□ -0.12
PITRM1-202ENST00000380989 ACSBG1Q96GR2 724 aa14.29□□□□□ -0.12
PITRM1-202ENST00000380989 BCL9LQ86UU0 1499 aa14.28□□□□□ -0.12
PITRM1-202ENST00000380989 SLC4A10Q6U841 1118 aa14.28□□□□□ -0.12
PITRM1-202ENST00000380989 USP21Q9UK80 565 aa14.28□□□□□ -0.12
PITRM1-202ENST00000380989 SLIT2O94813 1529 aa14.28□□□□□ -0.12
PITRM1-202ENST00000380989 EXOC5O00471 708 aa14.28□□□□□ -0.12
PITRM1-202ENST00000380989 UNC5CLQ8IV45 518 aa14.28□□□□□ -0.12
PITRM1-202ENST00000380989 TSC1Q92574 1164 aa14.28□□□□□ -0.12
PITRM1-202ENST00000380989 KDM3BQ7LBC6 1761 aa14.28□□□□□ -0.12
PITRM1-202ENST00000380989 NRAPQ86VF7 1730 aa14.28□□□□□ -0.12
PITRM1-202ENST00000380989 DTNBO60941 627 aa14.28□□□□□ -0.12
PITRM1-202ENST00000380989 GIGYF1O75420 1035 aaPredicted RBP14.28□□□□□ -0.12
PITRM1-202ENST00000380989 SPATA31A5Q5VU36 1347 aa14.27□□□□□ -0.12
PITRM1-202ENST00000380989 SPATA31A7Q8IWB4 1347 aa14.27□□□□□ -0.12
PITRM1-202ENST00000380989 ANKRD45Q5TZF3 282 aa14.27□□□□□ -0.12
PITRM1-202ENST00000380989 USP16Q9Y5T5 823 aa14.27□□□□□ -0.13
PITRM1-202ENST00000380989 SIPA1L3O60292 1781 aaPredicted RBP14.27□□□□□ -0.13
PITRM1-202ENST00000380989 NASPP49321 788 aaPredicted RBP14.27□□□□□ -0.13
PITRM1-202ENST00000380989 CAVIN1Q6NZI2 390 aaKnown RBP14.27□□□□□ -0.13
PITRM1-202ENST00000380989 DDX49Q9Y6V7 483 aaKnown RBP14.27□□□□□ -0.13
PITRM1-202ENST00000380989 DISP2A7MBM2 1401 aa14.26□□□□□ -0.13
PITRM1-202ENST00000380989 FAM177BA6PVY3 158 aa14.26□□□□□ -0.13
PITRM1-202ENST00000380989 IPO8O15397 1037 aaKnown RBP14.26□□□□□ -0.13
PITRM1-202ENST00000380989 STK31Q9BXU1 1019 aa14.26□□□□□ -0.13
PITRM1-202ENST00000380989 ASAP1Q9ULH1 1129 aa14.26□□□□□ -0.13
PITRM1-202ENST00000380989 MYL6BP14649 208 aa14.26□□□□□ -0.13
PITRM1-202ENST00000380989 MCTP1Q6DN14 999 aa14.26□□□□□ -0.13
PITRM1-202ENST00000380989 DDIT3P35638 169 aa14.25□□□□□ -0.13
PITRM1-202ENST00000380989 FKBP5Q13451 457 aaPredicted RBP14.25□□□□□ -0.13
PITRM1-202ENST00000380989 DDB1Q16531 1140 aa14.25□□□□□ -0.13
PITRM1-202ENST00000380989 CCDC30Q5VVM6 783 aa14.25□□□□□ -0.13
PITRM1-202ENST00000380989 TTC5Q8N0Z6 440 aa14.25□□□□□ -0.13
PITRM1-202ENST00000380989 ADAMTS7Q9UKP4 1686 aa14.25□□□□□ -0.13
PITRM1-202ENST00000380989 FLIIQ13045 1269 aa14.25□□□□□ -0.13
PITRM1-202ENST00000380989 PIGBQ92521 554 aa14.25□□□□□ -0.13
PITRM1-202ENST00000380989 TOGARAM1Q9Y4F4 1720 aa14.25□□□□□ -0.13
PITRM1-202ENST00000380989 RGS12O14924 1447 aa14.25□□□□□ -0.13
PITRM1-202ENST00000380989 DDX11L8A8MPP1 907 aa14.25□□□□□ -0.13
PITRM1-202ENST00000380989 AIMP1Q12904 312 aaKnown RBP14.25□□□□□ -0.13
PITRM1-202ENST00000380989 MARCH10Q8NA82 808 aaPredicted RBP14.25□□□□□ -0.13
PITRM1-202ENST00000380989 RNF214Q8ND24 703 aa14.25□□□□□ -0.13
PITRM1-202ENST00000380989 PRIM1P49642 420 aaKnown RBP14.24□□□□□ -0.13
PITRM1-202ENST00000380989 NSFL1CQ9UNZ2 370 aaKnown RBP14.24□□□□□ -0.13
PITRM1-202ENST00000380989 AFF2P51816 1311 aa14.24□□□□□ -0.13
PITRM1-202ENST00000380989 PTF1AQ7RTS3 328 aa14.24□□□□□ -0.13
PITRM1-202ENST00000380989 BRPF1P55201 1214 aaPredicted RBP14.23□□□□□ -0.13
PITRM1-202ENST00000380989 NKX1-1Q15270 411 aaPredicted RBP14.23□□□□□ -0.13
PITRM1-202ENST00000380989 BABAM1Q9NWV8 329 aa14.23□□□□□ -0.13
PITRM1-202ENST00000380989 SPATA31A6Q5VVP1 1343 aa14.23□□□□□ -0.13
PITRM1-202ENST00000380989 RAB3GAP1Q15042 981 aa14.23□□□□□ -0.13
PITRM1-202ENST00000380989 C16orf71Q8IYS4 520 aaPredicted RBP14.23□□□□□ -0.13
PITRM1-202ENST00000380989 FNBP4Q8N3X1 1017 aaPredicted RBP14.23□□□□□ -0.13
PITRM1-202ENST00000380989 TMOD3Q9NYL9 352 aa14.23□□□□□ -0.13
PITRM1-202ENST00000380989 KCNQ2O43526 872 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms