RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 LRRFIP2Q9Y608 721 aaKnown RBP24.75■■□□□ 1.55
PDLIM5-205ENST00000380180 ERVV-2B6SEH9 535 aa24.74■■□□□ 1.55
PDLIM5-205ENST00000380180 SNRPA1P09661 255 aaKnown RBP24.74■■□□□ 1.55
PDLIM5-205ENST00000380180 UBTFL1P0CB47 393 aaPredicted RBP24.74■■□□□ 1.55
PDLIM5-205ENST00000380180 KSR2Q6VAB6 950 aa24.74■■□□□ 1.55
PDLIM5-205ENST00000380180 MAP3K2Q9Y2U5 619 aa24.74■■□□□ 1.55
PDLIM5-205ENST00000380180 ATP8B2P98198 1209 aa24.73■■□□□ 1.55
PDLIM5-205ENST00000380180 USP16Q9Y5T5 823 aa24.73■■□□□ 1.55
PDLIM5-205ENST00000380180 ZBTB47Q9UFB7 747 aaPredicted RBP24.73■■□□□ 1.55
PDLIM5-205ENST00000380180 NOP58Q9Y2X3 529 aaKnown RBP24.73■■□□□ 1.55
PDLIM5-205ENST00000380180 PNMA6EA0A0J9YXQ4 647 aa24.71■■□□□ 1.55
PDLIM5-205ENST00000380180 UBR2Q8IWV8 1755 aa24.71■■□□□ 1.55
PDLIM5-205ENST00000380180 APBB1O00213 710 aa24.71■■□□□ 1.55
PDLIM5-205ENST00000380180 AIMP1Q12904 312 aaKnown RBP24.71■■□□□ 1.55
PDLIM5-205ENST00000380180 BMP2KLQ5H9B9 411 aa24.71■■□□□ 1.55
PDLIM5-205ENST00000380180 LAMB4A4D0S4 1761 aa24.7■■□□□ 1.55
PDLIM5-205ENST00000380180 NBPF7P0C2Y1 421 aaPredicted RBP24.7■■□□□ 1.54
PDLIM5-205ENST00000380180 MYL6BP14649 208 aa24.7■■□□□ 1.54
PDLIM5-205ENST00000380180 GLI3P10071 1580 aa24.7■■□□□ 1.54
PDLIM5-205ENST00000380180 PLEKHM2Q8IWE5 1019 aa24.69■■□□□ 1.54
PDLIM5-205ENST00000380180 C16orf71Q8IYS4 520 aaPredicted RBP24.69■■□□□ 1.54
PDLIM5-205ENST00000380180 BCL11AQ9H165 835 aa24.69■■□□□ 1.54
PDLIM5-205ENST00000380180 TOGARAM1Q9Y4F4 1720 aa24.69■■□□□ 1.54
PDLIM5-205ENST00000380180 KAT6BQ8WYB5 2073 aa24.69■■□□□ 1.54
PDLIM5-205ENST00000380180 SMARCA5O60264 1052 aaPredicted RBP24.69■■□□□ 1.54
PDLIM5-205ENST00000380180 DDX58O95786 925 aaKnown RBP24.69■■□□□ 1.54
PDLIM5-205ENST00000380180 DDRGK1Q96HY6 314 aa24.68■■□□□ 1.54
PDLIM5-205ENST00000380180 PAPPAQ13219 1627 aa24.68■■□□□ 1.54
PDLIM5-205ENST00000380180 ERICH6Q7L0X2 663 aa24.68■■□□□ 1.54
PDLIM5-205ENST00000380180 PLCH1Q4KWH8 1693 aa24.67■■□□□ 1.54
PDLIM5-205ENST00000380180 TOM1O60784 492 aa24.67■■□□□ 1.54
PDLIM5-205ENST00000380180 ALDH1L1O75891 902 aa24.67■■□□□ 1.54
PDLIM5-205ENST00000380180 PIP4K2BP78356 416 aa24.67■■□□□ 1.54
PDLIM5-205ENST00000380180 EXOC6BQ9Y2D4 811 aa24.67■■□□□ 1.54
PDLIM5-205ENST00000380180 XAGE3Q8WTP9 111 aa24.66■■□□□ 1.54
PDLIM5-205ENST00000380180 UPF2Q9HAU5 1272 aaKnown RBP24.66■■□□□ 1.54
PDLIM5-205ENST00000380180 ITGB4P16144 1822 aa24.65■■□□□ 1.54
PDLIM5-205ENST00000380180 COPS6Q7L5N1 327 aa24.65■■□□□ 1.54
PDLIM5-205ENST00000380180 LRP10Q7Z4F1 713 aa24.65■■□□□ 1.54
PDLIM5-205ENST00000380180 DISP2A7MBM2 1401 aa24.65■■□□□ 1.54
PDLIM5-205ENST00000380180 ADAMTS2O95450 1211 aa24.64■■□□□ 1.54
PDLIM5-205ENST00000380180 PIP4K2AP48426 406 aaPredicted RBP24.64■■□□□ 1.54
PDLIM5-205ENST00000380180 CWF19L2Q2TBE0 894 aaKnown RBP24.64■■□□□ 1.54
PDLIM5-205ENST00000380180 RIC3Q7Z5B4 369 aa24.64■■□□□ 1.53
PDLIM5-205ENST00000380180 LINS1Q8NG48 757 aa24.64■■□□□ 1.53
PDLIM5-205ENST00000380180 OTUD7AQ8TE49 926 aaPredicted RBP24.64■■□□□ 1.53
PDLIM5-205ENST00000380180 SSH3Q8TE77 659 aa24.64■■□□□ 1.53
PDLIM5-205ENST00000380180 WNK3Q9BYP7 1800 aa24.63■■□□□ 1.53
PDLIM5-205ENST00000380180 PPP1R42Q7Z4L9 355 aa24.63■■□□□ 1.53
PDLIM5-205ENST00000380180 C9orf78Q9NZ63 289 aaPredicted RBP24.63■■□□□ 1.53
PDLIM5-205ENST00000380180 KCPQ6ZWJ8 1503 aa24.63■■□□□ 1.53
PDLIM5-205ENST00000380180 PTCD1O75127 700 aaKnown RBP24.61■■□□□ 1.53
PDLIM5-205ENST00000380180 ANKRD13DQ6ZTN6 518 aa24.61■■□□□ 1.53
PDLIM5-205ENST00000380180 TBC1D32Q96NH3 1257 aa24.61■■□□□ 1.53
PDLIM5-205ENST00000380180 TMOD3Q9NYL9 352 aa24.61■■□□□ 1.53
PDLIM5-205ENST00000380180 IBTKQ9P2D0 1353 aaPredicted RBP24.6■■□□□ 1.53
PDLIM5-205ENST00000380180 NRAPQ86VF7 1730 aa24.6■■□□□ 1.53
PDLIM5-205ENST00000380180 GSPT1P15170 499 aaKnown RBP24.6■■□□□ 1.53
PDLIM5-205ENST00000380180 POLA2Q14181 598 aa24.6■■□□□ 1.53
PDLIM5-205ENST00000380180 LRRCC1Q9C099 1032 aa24.6■■□□□ 1.53
PDLIM5-205ENST00000380180 MFAP1P55081 439 aaKnown RBP24.59■■□□□ 1.53
PDLIM5-205ENST00000380180 TTC22Q5TAA0 569 aa24.59■■□□□ 1.53
PDLIM5-205ENST00000380180 ARFGEF2Q9Y6D5 1785 aa24.59■■□□□ 1.53
PDLIM5-205ENST00000380180 AFDNP55196 1824 aaKnown RBP24.59■■□□□ 1.53
PDLIM5-205ENST00000380180 NUTM2BA6NNL0 878 aaPredicted RBP24.59■■□□□ 1.53
PDLIM5-205ENST00000380180 NUTM2EB1AL46 878 aaPredicted RBP24.59■■□□□ 1.53
PDLIM5-205ENST00000380180 SRGAP3O43295 1099 aa24.59■■□□□ 1.53
PDLIM5-205ENST00000380180 IGKV5-2P06315 115 aa24.59■■□□□ 1.53
PDLIM5-205ENST00000380180 NUTM2AQ8IVF1 878 aaPredicted RBP24.59■■□□□ 1.53
PDLIM5-205ENST00000380180 TNS2Q63HR2 1409 aa24.58■■□□□ 1.53
PDLIM5-205ENST00000380180 NEXNQ0ZGT2 675 aa24.58■■□□□ 1.53
PDLIM5-205ENST00000380180 METTL22Q9BUU2 404 aaPredicted RBP24.58■■□□□ 1.53
PDLIM5-205ENST00000380180 GRM8O00222 908 aa24.57■■□□□ 1.52
PDLIM5-205ENST00000380180 EXOC5O00471 708 aa24.57■■□□□ 1.52
PDLIM5-205ENST00000380180 NBPF26B4DH59 902 aa24.57■■□□□ 1.52
PDLIM5-205ENST00000380180 NBPF14Q5TI25 921 aa24.57■■□□□ 1.52
PDLIM5-205ENST00000380180 NBPF10Q6P3W6 841 aaKnown RBP24.57■■□□□ 1.52
PDLIM5-205ENST00000380180 NBPF15Q8N660 670 aa24.57■■□□□ 1.52
PDLIM5-205ENST00000380180 ERBB4Q15303 1308 aa24.57■■□□□ 1.52
PDLIM5-205ENST00000380180 UTYO14607 1347 aa24.56■■□□□ 1.52
PDLIM5-205ENST00000380180 PIGBQ92521 554 aa24.56■■□□□ 1.52
PDLIM5-205ENST00000380180 HDAC5Q9UQL6 1122 aa24.56■■□□□ 1.52
PDLIM5-205ENST00000380180 MYD88Q99836 296 aa24.56■■□□□ 1.52
PDLIM5-205ENST00000380180 NEURL1BA8MQ27 555 aa24.55■■□□□ 1.52
PDLIM5-205ENST00000380180 SURF6O75683 361 aaKnown RBP24.55■■□□□ 1.52
PDLIM5-205ENST00000380180 UBAP1LF5GYI3 381 aa24.54■■□□□ 1.52
PDLIM5-205ENST00000380180 MTX1Q13505 466 aa24.54■■□□□ 1.52
PDLIM5-205ENST00000380180 TBC1D9Q6ZT07 1266 aa24.54■■□□□ 1.52
PDLIM5-205ENST00000380180 A1BGP04217 495 aa24.54■■□□□ 1.52
PDLIM5-205ENST00000380180 ANP32EQ9BTT0 268 aa24.54■■□□□ 1.52
PDLIM5-205ENST00000380180 C22orf23Q9BZE7 217 aa24.54■■□□□ 1.52
PDLIM5-205ENST00000380180 OSBPL3Q9H4L5 887 aa24.54■■□□□ 1.52
PDLIM5-205ENST00000380180 ASAP1Q9ULH1 1129 aa24.54■■□□□ 1.52
PDLIM5-205ENST00000380180 SPATA31A1Q5TZJ5 1347 aa24.53■■□□□ 1.52
PDLIM5-205ENST00000380180 RAB11FIP3O75154 756 aa24.53■■□□□ 1.52
PDLIM5-205ENST00000380180 SLC4A3P48751 1232 aa24.53■■□□□ 1.52
PDLIM5-205ENST00000380180 PDE1AP54750 535 aa24.53■■□□□ 1.52
PDLIM5-205ENST00000380180 NWD2Q9ULI1 1742 aa24.53■■□□□ 1.52
PDLIM5-205ENST00000380180 GCKRQ14397 625 aa24.52■■□□□ 1.52
PDLIM5-205ENST00000380180 SALL3Q9BXA9 1300 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms