RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 MX1P20591 662 aa16.97■□□□□ 0.31
PRDM16-203ENST00000378391 FAM193AP78312 1265 aa16.97■□□□□ 0.31
PRDM16-203ENST00000378391 CNNM1Q9NRU3 951 aa16.97■□□□□ 0.31
PRDM16-203ENST00000378391 EXOC6BQ9Y2D4 811 aa16.97■□□□□ 0.31
PRDM16-203ENST00000378391 ZMYM3Q14202 1370 aa16.97■□□□□ 0.31
PRDM16-203ENST00000378391 WDR7Q9Y4E6 1490 aa16.97■□□□□ 0.31
PRDM16-203ENST00000378391 TATP17735 454 aaPredicted RBP16.97■□□□□ 0.31
PRDM16-203ENST00000378391 CASTP20810 708 aaKnown RBP16.96■□□□□ 0.31
PRDM16-203ENST00000378391 C14orf93Q9H972 538 aaKnown RBP16.96■□□□□ 0.31
PRDM16-203ENST00000378391 GOLGA6L7A0A1B0GV03 622 aa16.96■□□□□ 0.31
PRDM16-203ENST00000378391 RAB11FIP3O75154 756 aa16.96■□□□□ 0.31
PRDM16-203ENST00000378391 ARHGEF5Q12774 1597 aa16.96■□□□□ 0.31
PRDM16-203ENST00000378391 ERLIN2O94905 339 aa16.95■□□□□ 0.3
PRDM16-203ENST00000378391 FAM177A1Q8N128 213 aaPredicted RBP16.95■□□□□ 0.3
PRDM16-203ENST00000378391 TRPM1Q7Z4N2 1603 aa16.95■□□□□ 0.3
PRDM16-203ENST00000378391 CCDC69A6NI79 296 aa16.95■□□□□ 0.3
PRDM16-203ENST00000378391 GOLGA6L10A6NI86 522 aa16.95■□□□□ 0.3
PRDM16-203ENST00000378391 SH2B1Q9NRF2 756 aaPredicted RBP16.95■□□□□ 0.3
PRDM16-203ENST00000378391 NOL7Q9UMY1 257 aaKnown RBP16.95■□□□□ 0.3
PRDM16-203ENST00000378391 GNL3LQ9NVN8 582 aaKnown RBP16.95■□□□□ 0.3
PRDM16-203ENST00000378391 SYNMO15061 1565 aa16.95■□□□□ 0.3
PRDM16-203ENST00000378391 TICAM2Q86XR7 235 aa16.95■□□□□ 0.3
PRDM16-203ENST00000378391 MTMR7Q9Y216 660 aa16.95■□□□□ 0.3
PRDM16-203ENST00000378391 MCM5P33992 734 aa16.94■□□□□ 0.3
PRDM16-203ENST00000378391 TTC22Q5TAA0 569 aa16.94■□□□□ 0.3
PRDM16-203ENST00000378391 ABCC10Q5T3U5 1492 aa16.94■□□□□ 0.3
PRDM16-203ENST00000378391 PTPN14Q15678 1187 aa16.94■□□□□ 0.3
PRDM16-203ENST00000378391 ZFYVE27Q5T4F4 411 aa16.94■□□□□ 0.3
PRDM16-203ENST00000378391 CCDC181Q5TID7 509 aa16.94■□□□□ 0.3
PRDM16-203ENST00000378391 CEP126Q9P2H0 1117 aa16.93■□□□□ 0.3
PRDM16-203ENST00000378391 KDM5AP29375 1690 aaKnown RBP16.93■□□□□ 0.3
PRDM16-203ENST00000378391 SFPQP23246 707 aaKnown RBP eCLIP16.93■□□□□ 0.3
PRDM16-203ENST00000378391 IQCEQ6IPM2 695 aa16.93■□□□□ 0.3
PRDM16-203ENST00000378391 ESCO1Q5FWF5 840 aa16.93■□□□□ 0.3
PRDM16-203ENST00000378391 CCDC57Q2TAC2 916 aa16.92■□□□□ 0.3
PRDM16-203ENST00000378391 ANO10Q9NW15 660 aa16.92■□□□□ 0.3
PRDM16-203ENST00000378391 FBXO3Q9UK99 471 aa16.92■□□□□ 0.3
PRDM16-203ENST00000378391 RRS1Q15050 365 aaKnown RBP16.92■□□□□ 0.3
PRDM16-203ENST00000378391 FERMT3Q86UX7 667 aa16.92■□□□□ 0.3
PRDM16-203ENST00000378391 CCDC83Q8IWF9 413 aa16.92■□□□□ 0.3
PRDM16-203ENST00000378391 ANKRD36BQ8N2N9 1353 aa16.92■□□□□ 0.3
PRDM16-203ENST00000378391 KIF18AQ8NI77 898 aa16.92■□□□□ 0.3
PRDM16-203ENST00000378391 WASF1Q92558 559 aa16.92■□□□□ 0.3
PRDM16-203ENST00000378391 TMCO3Q6UWJ1 677 aa16.91■□□□□ 0.3
PRDM16-203ENST00000378391 KRT18P05783 430 aaKnown RBP16.91■□□□□ 0.3
PRDM16-203ENST00000378391 PRIM1P49642 420 aaKnown RBP16.91■□□□□ 0.3
PRDM16-203ENST00000378391 CFAP100Q494V2 611 aa16.91■□□□□ 0.3
PRDM16-203ENST00000378391 LRSAM1Q6UWE0 723 aa16.91■□□□□ 0.3
PRDM16-203ENST00000378391 NUTM1Q86Y26 1132 aa16.91■□□□□ 0.3
PRDM16-203ENST00000378391 CENPHQ9H3R5 247 aa16.91■□□□□ 0.3
PRDM16-203ENST00000378391 CCDC61Q9Y6R9 512 aa16.91■□□□□ 0.3
PRDM16-203ENST00000378391 PLCH2O75038 1416 aa16.91■□□□□ 0.3
PRDM16-203ENST00000378391 TRAPPC8Q9Y2L5 1435 aa16.91■□□□□ 0.3
PRDM16-203ENST00000378391 SETSIPP0DME0 302 aa16.91■□□□□ 0.3
PRDM16-203ENST00000378391 FKBP4Q02790 459 aaKnown RBP eCLIP16.91■□□□□ 0.3
PRDM16-203ENST00000378391 GBP3Q9H0R5 595 aa16.9■□□□□ 0.3
PRDM16-203ENST00000378391 ARHGAP29Q52LW3 1261 aa16.9■□□□□ 0.3
PRDM16-203ENST00000378391 SUDS3Q9H7L9 328 aaPredicted RBP16.9■□□□□ 0.3
PRDM16-203ENST00000378391 EPB41L2O43491 1005 aaKnown RBP16.9■□□□□ 0.3
PRDM16-203ENST00000378391 SYCP1Q15431 976 aa16.9■□□□□ 0.3
PRDM16-203ENST00000378391 ARHGAP45Q92619 1136 aa16.9■□□□□ 0.3
PRDM16-203ENST00000378391 ZSCAN12O43309 604 aa16.9■□□□□ 0.3
PRDM16-203ENST00000378391 CAMK4Q16566 473 aa16.9■□□□□ 0.3
PRDM16-203ENST00000378391 SKIDA1Q1XH10 827 aa16.9■□□□□ 0.3
PRDM16-203ENST00000378391 MBIPQ9NS73 344 aa16.9■□□□□ 0.3
PRDM16-203ENST00000378391 LIMCH1Q9UPQ0 1083 aa16.9■□□□□ 0.3
PRDM16-203ENST00000378391 DYNC1I1O14576 645 aa16.89■□□□□ 0.29
PRDM16-203ENST00000378391 CABP4P57796 275 aa16.89■□□□□ 0.29
PRDM16-203ENST00000378391 AEBP2Q6ZN18 517 aaPredicted RBP16.89■□□□□ 0.29
PRDM16-203ENST00000378391 DDX11Q96FC9 970 aa16.89■□□□□ 0.29
PRDM16-203ENST00000378391 SPG7Q9UQ90 795 aa16.89■□□□□ 0.29
PRDM16-203ENST00000378391 CROCC2H7BZ55 1655 aa16.89■□□□□ 0.29
PRDM16-203ENST00000378391 GOLGA6L10A0A0M3HER8 536 aa16.89■□□□□ 0.29
PRDM16-203ENST00000378391 IKQ13123 557 aaPredicted RBP16.89■□□□□ 0.29
PRDM16-203ENST00000378391 MRPL50Q8N5N7 158 aaKnown RBP16.89■□□□□ 0.29
PRDM16-203ENST00000378391 U3KPZ7 1027 aaPredicted RBP16.89■□□□□ 0.29
PRDM16-203ENST00000378391 GNAT3A8MTJ3 354 aa16.89■□□□□ 0.29
PRDM16-203ENST00000378391 CTAGE5O15320 804 aa16.89■□□□□ 0.29
PRDM16-203ENST00000378391 PRPF40BQ6NWY9 871 aaKnown RBP16.89■□□□□ 0.29
PRDM16-203ENST00000378391 NUP133Q8WUM0 1156 aa16.89■□□□□ 0.29
PRDM16-203ENST00000378391 BTBD11A6QL63 1104 aa16.88■□□□□ 0.29
PRDM16-203ENST00000378391 DHX37Q8IY37 1157 aaKnown RBP16.88■□□□□ 0.29
PRDM16-203ENST00000378391 NEMFO60524 1076 aa16.88■□□□□ 0.29
PRDM16-203ENST00000378391 IMMTQ16891 758 aaKnown RBP16.88■□□□□ 0.29
PRDM16-203ENST00000378391 ZKSCAN5Q9Y2L8 839 aa16.88■□□□□ 0.29
PRDM16-203ENST00000378391 MYL6BP14649 208 aa16.88■□□□□ 0.29
PRDM16-203ENST00000378391 HS1BP3Q53T59 392 aa16.88■□□□□ 0.29
PRDM16-203ENST00000378391 SDSP20132 328 aa16.87■□□□□ 0.29
PRDM16-203ENST00000378391 GAS2L3Q86XJ1 694 aa16.87■□□□□ 0.29
PRDM16-203ENST00000378391 UBAC1Q9BSL1 405 aa16.87■□□□□ 0.29
PRDM16-203ENST00000378391 PLA2R1Q13018 1463 aa16.87■□□□□ 0.29
PRDM16-203ENST00000378391 FAM177BA6PVY3 158 aa16.87■□□□□ 0.29
PRDM16-203ENST00000378391 SARNPP82979 210 aaKnown RBP16.87■□□□□ 0.29
PRDM16-203ENST00000378391 RBM28Q9NW13 759 aaKnown RBP16.87■□□□□ 0.29
PRDM16-203ENST00000378391 CEP131Q9UPN4 1083 aa16.87■□□□□ 0.29
PRDM16-203ENST00000378391 CCDC102AQ96A19 550 aa16.87■□□□□ 0.29
PRDM16-203ENST00000378391 GDPD2Q9HCC8 539 aa16.87■□□□□ 0.29
PRDM16-203ENST00000378391 USP25Q9UHP3 1055 aa16.87■□□□□ 0.29
PRDM16-203ENST00000378391 SAMD1Q6SPF0 538 aaPredicted RBP16.87■□□□□ 0.29
PRDM16-203ENST00000378391 C16orf71Q8IYS4 520 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms