RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 SPA17Q15506 151 aa16.4■□□□□ 0.22
TRIM13-202ENST00000378182 DUSP27Q5VZP5 1158 aa16.4■□□□□ 0.22
TRIM13-202ENST00000378182 CHD1LQ86WJ1 897 aa16.4■□□□□ 0.22
TRIM13-202ENST00000378182 BAG4O95429 457 aaKnown RBP16.4■□□□□ 0.22
TRIM13-202ENST00000378182 TCERG1LQ5VWI1 586 aa16.4■□□□□ 0.22
TRIM13-202ENST00000378182 ZNF213O14771 459 aa16.4■□□□□ 0.22
TRIM13-202ENST00000378182 WDR33Q9C0J8 1336 aaKnown RBP16.39■□□□□ 0.21
TRIM13-202ENST00000378182 MBD3O95983 291 aa16.39■□□□□ 0.21
TRIM13-202ENST00000378182 FKBP15Q5T1M5 1219 aa16.39■□□□□ 0.21
TRIM13-202ENST00000378182 FAM212AQ96EL1 285 aa16.39■□□□□ 0.21
TRIM13-202ENST00000378182 PRC1O43663 620 aa16.39■□□□□ 0.21
TRIM13-202ENST00000378182 VEZTQ9HBM0 779 aa16.39■□□□□ 0.21
TRIM13-202ENST00000378182 IFIT3O14879 490 aaKnown RBP16.39■□□□□ 0.21
TRIM13-202ENST00000378182 IQCEQ6IPM2 695 aa16.39■□□□□ 0.21
TRIM13-202ENST00000378182 SSX2IPQ9Y2D8 614 aa16.39■□□□□ 0.21
TRIM13-202ENST00000378182 U3KPZ7 1027 aaPredicted RBP16.39■□□□□ 0.21
TRIM13-202ENST00000378182 MPHOSPH6Q99547 160 aaKnown RBP16.38■□□□□ 0.21
TRIM13-202ENST00000378182 ATP5J2-PTCD1G3V325 749 aa16.38■□□□□ 0.21
TRIM13-202ENST00000378182 STAMBPO95630 424 aa16.38■□□□□ 0.21
TRIM13-202ENST00000378182 ATF7IPQ6VMQ6 1270 aa16.38■□□□□ 0.21
TRIM13-202ENST00000378182 ZNF408Q9H9D4 720 aa16.38■□□□□ 0.21
TRIM13-202ENST00000378182 CATIPQ7Z7H3 387 aa16.38■□□□□ 0.21
TRIM13-202ENST00000378182 CCDC148Q8NFR7 591 aa16.38■□□□□ 0.21
TRIM13-202ENST00000378182 CHRNA2Q15822 529 aa16.38■□□□□ 0.21
TRIM13-202ENST00000378182 PRPF40BQ6NWY9 871 aaKnown RBP16.38■□□□□ 0.21
TRIM13-202ENST00000378182 PRKCSHP14314 528 aaPredicted RBP16.38■□□□□ 0.21
TRIM13-202ENST00000378182 PRPF4BQ13523 1007 aaKnown RBP16.38■□□□□ 0.21
TRIM13-202ENST00000378182 HOOK3Q86VS8 718 aa16.38■□□□□ 0.21
TRIM13-202ENST00000378182 LRSAM1Q6UWE0 723 aa16.37■□□□□ 0.21
TRIM13-202ENST00000378182 FERMT3Q86UX7 667 aa16.37■□□□□ 0.21
TRIM13-202ENST00000378182 HMGB2P26583 209 aaKnown RBP16.37■□□□□ 0.21
TRIM13-202ENST00000378182 TDRD12Q587J7 1177 aaKnown RBP16.37■□□□□ 0.21
TRIM13-202ENST00000378182 NUP62CLQ9H1M0 184 aa16.37■□□□□ 0.21
TRIM13-202ENST00000378182 HLA-DOAP06340 250 aa16.37■□□□□ 0.21
TRIM13-202ENST00000378182 ISM2Q6H9L7 571 aa16.37■□□□□ 0.21
TRIM13-202ENST00000378182 CPLX3Q8WVH0 158 aa16.37■□□□□ 0.21
TRIM13-202ENST00000378182 SYNCQ9H7C4 482 aa16.37■□□□□ 0.21
TRIM13-202ENST00000378182 OTUD6BQ8N6M0 293 aa16.37■□□□□ 0.21
TRIM13-202ENST00000378182 TSPY2A6NKD2 308 aa16.37■□□□□ 0.21
TRIM13-202ENST00000378182 NBPF6Q5VWK0 638 aa16.37■□□□□ 0.21
TRIM13-202ENST00000378182 NBPF5PQ86XG9 351 aaPredicted RBP16.37■□□□□ 0.21
TRIM13-202ENST00000378182 NBPF4Q96M43 638 aa16.37■□□□□ 0.21
TRIM13-202ENST00000378182 SMC1AQ14683 1233 aaKnown RBP16.36■□□□□ 0.21
TRIM13-202ENST00000378182 K7ELQ4 463 aaPredicted RBP16.36■□□□□ 0.21
TRIM13-202ENST00000378182 INCENPQ9NQS7 918 aa16.36■□□□□ 0.21
TRIM13-202ENST00000378182 RGS22Q8NE09 1264 aa16.36■□□□□ 0.21
TRIM13-202ENST00000378182 CEP63Q96MT8 703 aa16.36■□□□□ 0.21
TRIM13-202ENST00000378182 ARHGAP29Q52LW3 1261 aa16.36■□□□□ 0.21
TRIM13-202ENST00000378182 ATAD2BQ9ULI0 1458 aa16.36■□□□□ 0.21
TRIM13-202ENST00000378182 KRT28Q7Z3Y7 464 aa16.36■□□□□ 0.21
TRIM13-202ENST00000378182 SMTNL1A8MU46 457 aa16.35■□□□□ 0.21
TRIM13-202ENST00000378182 CCDC194A0A1B0GVG4 234 aa16.35■□□□□ 0.21
TRIM13-202ENST00000378182 F6X3S4 739 aa16.35■□□□□ 0.21
TRIM13-202ENST00000378182 KAT14Q9H8E8 782 aa16.35■□□□□ 0.21
TRIM13-202ENST00000378182 KRT32Q14532 448 aa16.35■□□□□ 0.21
TRIM13-202ENST00000378182 SNRKQ9NRH2 765 aa16.35■□□□□ 0.21
TRIM13-202ENST00000378182 IQSEC3Q9UPP2 1182 aaPredicted RBP16.35■□□□□ 0.21
TRIM13-202ENST00000378182 NUP88Q99567 741 aaPredicted RBP16.35■□□□□ 0.21
TRIM13-202ENST00000378182 MRE11P49959 708 aa16.34■□□□□ 0.21
TRIM13-202ENST00000378182 IFFO1Q0D2I5 559 aa16.34■□□□□ 0.21
TRIM13-202ENST00000378182 GJA3Q9Y6H8 435 aa16.34■□□□□ 0.21
TRIM13-202ENST00000378182 FGD6Q6ZV73 1430 aa16.34■□□□□ 0.21
TRIM13-202ENST00000378182 HAND2P61296 217 aa16.34■□□□□ 0.21
TRIM13-202ENST00000378182 RAB34Q9BZG1 259 aa16.34■□□□□ 0.21
TRIM13-202ENST00000378182 NAIPQ13075 1403 aa16.34■□□□□ 0.21
TRIM13-202ENST00000378182 KIF21BO75037 1637 aa16.34■□□□□ 0.21
TRIM13-202ENST00000378182 TAF7Q15545 349 aaPredicted RBP16.34■□□□□ 0.21
TRIM13-202ENST00000378182 ATP2B3Q16720 1220 aa16.34■□□□□ 0.21
TRIM13-202ENST00000378182 GOLGA8AA7E2F4 631 aa16.34■□□□□ 0.21
TRIM13-202ENST00000378182 GOLGA8BA8MQT2 603 aa16.34■□□□□ 0.21
TRIM13-202ENST00000378182 AKNAD1Q5T1N1 836 aa16.34■□□□□ 0.21
TRIM13-202ENST00000378182 A0A087WZG4 1122 aa16.34■□□□□ 0.21
TRIM13-202ENST00000378182 CASQ1P31415 396 aa16.34■□□□□ 0.21
TRIM13-202ENST00000378182 ATP6V1AP38606 617 aa16.34■□□□□ 0.21
TRIM13-202ENST00000378182 RIMBP2O15034 1052 aa16.33■□□□□ 0.21
TRIM13-202ENST00000378182 RFX1P22670 979 aa16.33■□□□□ 0.21
TRIM13-202ENST00000378182 C8orf76Q96K31 380 aa16.33■□□□□ 0.21
TRIM13-202ENST00000378182 TMCO5BA8MYB1 307 aa16.33■□□□□ 0.2
TRIM13-202ENST00000378182 TAF12Q16514 161 aa16.33■□□□□ 0.2
TRIM13-202ENST00000378182 PANK2Q9BZ23 570 aa16.33■□□□□ 0.2
TRIM13-202ENST00000378182 UTP14AQ9BVJ6 771 aaKnown RBP16.33■□□□□ 0.2
TRIM13-202ENST00000378182 MAP3K2Q9Y2U5 619 aa16.33■□□□□ 0.2
TRIM13-202ENST00000378182 ERICH4A6NGS2 130 aa16.32■□□□□ 0.2
TRIM13-202ENST00000378182 LUZP1Q86V48 1076 aa16.32■□□□□ 0.2
TRIM13-202ENST00000378182 VPS36Q86VN1 386 aa16.32■□□□□ 0.2
TRIM13-202ENST00000378182 CALML4Q96GE6 196 aa16.32■□□□□ 0.2
TRIM13-202ENST00000378182 GOLIM4O00461 696 aa16.32■□□□□ 0.2
TRIM13-202ENST00000378182 ERLIN1O75477 346 aa16.32■□□□□ 0.2
TRIM13-202ENST00000378182 ZBTB21Q9ULJ3 1066 aa16.32■□□□□ 0.2
TRIM13-202ENST00000378182 EIF3JO75822 258 aaKnown RBP16.32■□□□□ 0.2
TRIM13-202ENST00000378182 BAG3O95817 575 aa16.32■□□□□ 0.2
TRIM13-202ENST00000378182 TMEM57Q8N5G2 664 aa16.32■□□□□ 0.2
TRIM13-202ENST00000378182 CDC5LQ99459 802 aaKnown RBP16.32■□□□□ 0.2
TRIM13-202ENST00000378182 NSD3Q9BZ95 1437 aa16.32■□□□□ 0.2
TRIM13-202ENST00000378182 PROCA1Q8NCQ7 364 aaPredicted RBP16.31■□□□□ 0.2
TRIM13-202ENST00000378182 NOP2P46087 812 aaKnown RBP16.31■□□□□ 0.2
TRIM13-202ENST00000378182 SETDB2Q96T68 719 aa16.31■□□□□ 0.2
TRIM13-202ENST00000378182 IDEP14735 1019 aa16.31■□□□□ 0.2
TRIM13-202ENST00000378182 MVPQ14764 893 aaKnown RBP16.31■□□□□ 0.2
TRIM13-202ENST00000378182 HDAC9Q9UKV0 1011 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms