RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 PALD1Q9ULE6 856 aa14.33□□□□□ -0.11
TNFRSF9-201ENST00000377507 TRIM6-TRIM34B2RNG4 842 aa14.33□□□□□ -0.12
TNFRSF9-201ENST00000377507 SURF6O75683 361 aaKnown RBP14.33□□□□□ -0.12
TNFRSF9-201ENST00000377507 NBPF7P0C2Y1 421 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF9-201ENST00000377507 MTX1Q13505 466 aa14.33□□□□□ -0.12
TNFRSF9-201ENST00000377507 ESCO1Q5FWF5 840 aa14.33□□□□□ -0.12
TNFRSF9-201ENST00000377507 RILPL2Q969X0 211 aa14.33□□□□□ -0.12
TNFRSF9-201ENST00000377507 KIF1BPQ96EK5 621 aa14.33□□□□□ -0.12
TNFRSF9-201ENST00000377507 LMTK3Q96Q04 1460 aa14.32□□□□□ -0.12
TNFRSF9-201ENST00000377507 ADCY9O60503 1353 aa14.32□□□□□ -0.12
TNFRSF9-201ENST00000377507 USP42Q9H9J4 1324 aaKnown RBP14.32□□□□□ -0.12
TNFRSF9-201ENST00000377507 PI4KAP2A4QPH2 592 aa14.32□□□□□ -0.12
TNFRSF9-201ENST00000377507 BTBD11A6QL63 1104 aa14.32□□□□□ -0.12
TNFRSF9-201ENST00000377507 KCNQ3O43525 872 aa14.32□□□□□ -0.12
TNFRSF9-201ENST00000377507 EIF2S2P20042 333 aaKnown RBP14.32□□□□□ -0.12
TNFRSF9-201ENST00000377507 MCTP1Q6DN14 999 aa14.32□□□□□ -0.12
TNFRSF9-201ENST00000377507 PI4KAP1Q8N8J0 262 aa14.32□□□□□ -0.12
TNFRSF9-201ENST00000377507 AK9Q5TCS8 1911 aa14.31□□□□□ -0.12
TNFRSF9-201ENST00000377507 SRGAP3O43295 1099 aa14.31□□□□□ -0.12
TNFRSF9-201ENST00000377507 HSPA4P34932 840 aa14.31□□□□□ -0.12
TNFRSF9-201ENST00000377507 IL1RAPL2Q9NP60 686 aa14.31□□□□□ -0.12
TNFRSF9-201ENST00000377507 ANO2Q9NQ90 1003 aa14.31□□□□□ -0.12
TNFRSF9-201ENST00000377507 RNMTO43148 476 aaKnown RBP14.31□□□□□ -0.12
TNFRSF9-201ENST00000377507 GCP02774 474 aa14.31□□□□□ -0.12
TNFRSF9-201ENST00000377507 CLCN1P35523 988 aa14.31□□□□□ -0.12
TNFRSF9-201ENST00000377507 TEFQ10587 303 aa14.31□□□□□ -0.12
TNFRSF9-201ENST00000377507 HSP90AB4PQ58FF6 505 aa14.31□□□□□ -0.12
TNFRSF9-201ENST00000377507 ZNF530Q6P9A1 599 aaPredicted RBP14.31□□□□□ -0.12
TNFRSF9-201ENST00000377507 RGPD2P0DJD1 1756 aa14.31□□□□□ -0.12
TNFRSF9-201ENST00000377507 NUTM1Q86Y26 1132 aa14.3□□□□□ -0.12
TNFRSF9-201ENST00000377507 LRRC59Q96AG4 307 aaKnown RBP14.3□□□□□ -0.12
TNFRSF9-201ENST00000377507 ANO8Q9HCE9 1232 aaPredicted RBP14.3□□□□□ -0.12
TNFRSF9-201ENST00000377507 DBF4Q9UBU7 674 aaPredicted RBP14.3□□□□□ -0.12
TNFRSF9-201ENST00000377507 CAMTA1Q9Y6Y1 1673 aa14.3□□□□□ -0.12
TNFRSF9-201ENST00000377507 GIGYF1O75420 1035 aaPredicted RBP14.29□□□□□ -0.12
TNFRSF9-201ENST00000377507 ALDH1L1O75891 902 aa14.29□□□□□ -0.12
TNFRSF9-201ENST00000377507 BRD1O95696 1058 aa14.29□□□□□ -0.12
TNFRSF9-201ENST00000377507 RBM33Q96EV2 1170 aaKnown RBP14.29□□□□□ -0.12
TNFRSF9-201ENST00000377507 IL25Q9H293 177 aa14.29□□□□□ -0.12
TNFRSF9-201ENST00000377507 CRYBG1Q9Y4K1 1723 aa14.29□□□□□ -0.12
TNFRSF9-201ENST00000377507 MST1RQ04912 1400 aa14.29□□□□□ -0.12
TNFRSF9-201ENST00000377507 SGSM2O43147 1006 aa14.29□□□□□ -0.12
TNFRSF9-201ENST00000377507 PLEKHG5O94827 1062 aa14.29□□□□□ -0.12
TNFRSF9-201ENST00000377507 MPRIPQ6WCQ1 1025 aa14.29□□□□□ -0.12
TNFRSF9-201ENST00000377507 PPP1R9BQ96SB3 815 aa14.29□□□□□ -0.12
TNFRSF9-201ENST00000377507 PXDNQ92626 1479 aa14.28□□□□□ -0.12
TNFRSF9-201ENST00000377507 ADAMTS7Q9UKP4 1686 aa14.28□□□□□ -0.12
TNFRSF9-201ENST00000377507 TTC41PQ6P2S7 1318 aa14.28□□□□□ -0.12
TNFRSF9-201ENST00000377507 RAD50Q92878 1312 aa14.28□□□□□ -0.12
TNFRSF9-201ENST00000377507 ZSCAN23Q3MJ62 389 aa14.27□□□□□ -0.12
TNFRSF9-201ENST00000377507 KSR2Q6VAB6 950 aa14.27□□□□□ -0.12
TNFRSF9-201ENST00000377507 GPT2Q8TD30 523 aa14.27□□□□□ -0.12
TNFRSF9-201ENST00000377507 PRPF40AO75400 957 aaKnown RBP14.27□□□□□ -0.13
TNFRSF9-201ENST00000377507 C1orf141Q5JVX7 400 aa14.27□□□□□ -0.13
TNFRSF9-201ENST00000377507 ORAI2Q96SN7 254 aa14.27□□□□□ -0.13
TNFRSF9-201ENST00000377507 NASPP49321 788 aaPredicted RBP14.26□□□□□ -0.13
TNFRSF9-201ENST00000377507 CCDC173Q0VFZ6 552 aa14.26□□□□□ -0.13
TNFRSF9-201ENST00000377507 CNTROBQ8N137 903 aa14.26□□□□□ -0.13
TNFRSF9-201ENST00000377507 ANKRD24Q8TF21 1146 aa14.26□□□□□ -0.13
TNFRSF9-201ENST00000377507 LSG1Q9H089 658 aaKnown RBP14.26□□□□□ -0.13
TNFRSF9-201ENST00000377507 HDAC5Q9UQL6 1122 aa14.26□□□□□ -0.13
TNFRSF9-201ENST00000377507 NPHP4O75161 1426 aaPredicted RBP14.26□□□□□ -0.13
TNFRSF9-201ENST00000377507 UTYO14607 1347 aa14.26□□□□□ -0.13
TNFRSF9-201ENST00000377507 SIPA1L3O60292 1781 aaPredicted RBP14.25□□□□□ -0.13
TNFRSF9-201ENST00000377507 ANXA1P04083 346 aa14.25□□□□□ -0.13
TNFRSF9-201ENST00000377507 CAVIN1Q6NZI2 390 aaKnown RBP14.25□□□□□ -0.13
TNFRSF9-201ENST00000377507 TRPM3Q9HCF6 1732 aaPredicted RBP14.25□□□□□ -0.13
TNFRSF9-201ENST00000377507 ESPNB1AK53 854 aa14.25□□□□□ -0.13
TNFRSF9-201ENST00000377507 GLRX3O76003 335 aaKnown RBP14.25□□□□□ -0.13
TNFRSF9-201ENST00000377507 HYPKQ9NX55 129 aa14.25□□□□□ -0.13
TNFRSF9-201ENST00000377507 MAP3K2Q9Y2U5 619 aa14.25□□□□□ -0.13
TNFRSF9-201ENST00000377507 SETD1BQ9UPS6 1966 aaKnown RBP14.24□□□□□ -0.13
TNFRSF9-201ENST00000377507 TTC14Q96N46 770 aa14.24□□□□□ -0.13
TNFRSF9-201ENST00000377507 AXIN2Q9Y2T1 843 aa14.24□□□□□ -0.13
TNFRSF9-201ENST00000377507 PROSER3Q2NL68 480 aa14.23□□□□□ -0.13
TNFRSF9-201ENST00000377507 ERC1Q8IUD2 1116 aa14.23□□□□□ -0.13
TNFRSF9-201ENST00000377507 UPF3BQ9BZI7 483 aaKnown RBP14.23□□□□□ -0.13
TNFRSF9-201ENST00000377507 SNX14Q9Y5W7 946 aa14.23□□□□□ -0.13
TNFRSF9-201ENST00000377507 ADAMTSL3P82987 1691 aa14.23□□□□□ -0.13
TNFRSF9-201ENST00000377507 ZBTB7CA1YPR0 619 aa14.23□□□□□ -0.13
TNFRSF9-201ENST00000377507 MBD3O95983 291 aa14.23□□□□□ -0.13
TNFRSF9-201ENST00000377507 CLASRPQ8N2M8 674 aaKnown RBP14.23□□□□□ -0.13
TNFRSF9-201ENST00000377507 LINS1Q8NG48 757 aa14.23□□□□□ -0.13
TNFRSF9-201ENST00000377507 ERBB4Q15303 1308 aa14.23□□□□□ -0.13
TNFRSF9-201ENST00000377507 MAP4K4O95819 1239 aaPredicted RBP14.22□□□□□ -0.13
TNFRSF9-201ENST00000377507 PDIA6Q15084 440 aa14.22□□□□□ -0.13
TNFRSF9-201ENST00000377507 KCNB2Q92953 911 aa14.22□□□□□ -0.13
TNFRSF9-201ENST00000377507 TRIM44Q96DX7 344 aaPredicted RBP14.22□□□□□ -0.13
TNFRSF9-201ENST00000377507 DDX21Q9NR30 783 aaKnown RBP eCLIP14.22□□□□□ -0.13
TNFRSF9-201ENST00000377507 ECHDC1Q9NTX5 307 aa14.22□□□□□ -0.13
TNFRSF9-201ENST00000377507 C9orf78Q9NZ63 289 aaPredicted RBP14.22□□□□□ -0.13
TNFRSF9-201ENST00000377507 NCLP19338 710 aaKnown RBP14.21□□□□□ -0.13
TNFRSF9-201ENST00000377507 KAZALD1Q96I82 304 aa14.21□□□□□ -0.13
TNFRSF9-201ENST00000377507 TMEM63CQ9P1W3 806 aa14.21□□□□□ -0.13
TNFRSF9-201ENST00000377507 PRIM1P49642 420 aaKnown RBP14.21□□□□□ -0.14
TNFRSF9-201ENST00000377507 KRT28Q7Z3Y7 464 aa14.21□□□□□ -0.14
TNFRSF9-201ENST00000377507 RASEFQ8IZ41 740 aa14.21□□□□□ -0.14
TNFRSF9-201ENST00000377507 CHAMP1Q96JM3 812 aa14.21□□□□□ -0.14
TNFRSF9-201ENST00000377507 RBSNQ9H1K0 784 aa14.21□□□□□ -0.14
TNFRSF9-201ENST00000377507 ERBB3P21860 1342 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms