RNA–Protein interactions for RNA: ENST00000377038.7

DFFA-202, Transcript of DNA fragmentation factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DFFA, Length 6,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-202ENST00000377038 NFKBIBQ15653 356 aa15.82■□□□□ 0.12
DFFA-202ENST00000377038 PER1O15534 1290 aaPredicted RBP15.82■□□□□ 0.12
DFFA-202ENST00000377038 DDX17Q92841 729 aaKnown RBP15.81■□□□□ 0.12
DFFA-202ENST00000377038 FIBPO43427 364 aa15.81■□□□□ 0.12
DFFA-202ENST00000377038 DZIP1Q86YF9 867 aaKnown RBP15.81■□□□□ 0.12
DFFA-202ENST00000377038 CCAR1Q8IX12 1150 aaKnown RBP15.81■□□□□ 0.12
DFFA-202ENST00000377038 CDC5LQ99459 802 aaKnown RBP15.81■□□□□ 0.12
DFFA-202ENST00000377038 CASTP20810 708 aaKnown RBP15.81■□□□□ 0.12
DFFA-202ENST00000377038 SMARCC1Q92922 1105 aaPredicted RBP15.81■□□□□ 0.12
DFFA-202ENST00000377038 ZNF396Q96N95 335 aaPredicted RBP15.81■□□□□ 0.12
DFFA-202ENST00000377038 TMOD2Q9NZR1 351 aa15.81■□□□□ 0.12
DFFA-202ENST00000377038 USP5P45974 858 aa15.8■□□□□ 0.12
DFFA-202ENST00000377038 MAP3K12Q12852 859 aa15.8■□□□□ 0.12
DFFA-202ENST00000377038 ARHGAP45Q92619 1136 aa15.8■□□□□ 0.12
DFFA-202ENST00000377038 NBPF6Q5VWK0 638 aa15.8■□□□□ 0.12
DFFA-202ENST00000377038 DDX46Q7L014 1031 aaKnown RBP15.8■□□□□ 0.12
DFFA-202ENST00000377038 NBPF5PQ86XG9 351 aaPredicted RBP15.8■□□□□ 0.12
DFFA-202ENST00000377038 NBPF4Q96M43 638 aa15.8■□□□□ 0.12
DFFA-202ENST00000377038 RSPH6AQ9H0K4 717 aa15.8■□□□□ 0.12
DFFA-202ENST00000377038 STK38Q15208 465 aa15.8■□□□□ 0.12
DFFA-202ENST00000377038 PRPF40BQ6NWY9 871 aaKnown RBP15.8■□□□□ 0.12
DFFA-202ENST00000377038 DCAF5Q96JK2 942 aa15.8■□□□□ 0.12
DFFA-202ENST00000377038 MRPL50Q8N5N7 158 aaKnown RBP15.8■□□□□ 0.12
DFFA-202ENST00000377038 MEIS3Q99687 375 aa15.8■□□□□ 0.12
DFFA-202ENST00000377038 PCDH11XQ9BZA7 1347 aa15.79■□□□□ 0.12
DFFA-202ENST00000377038 PCDH11YQ9BZA8 1340 aa15.79■□□□□ 0.12
DFFA-202ENST00000377038 PREX2Q70Z35 1606 aa15.79■□□□□ 0.12
DFFA-202ENST00000377038 C6orf229H3BNL8 230 aa15.79■□□□□ 0.12
DFFA-202ENST00000377038 MINDY4BA8MYZ0 360 aa15.79■□□□□ 0.12
DFFA-202ENST00000377038 PRPF40AO75400 957 aaKnown RBP15.79■□□□□ 0.12
DFFA-202ENST00000377038 SBNO1A3KN83 1393 aa15.79■□□□□ 0.12
DFFA-202ENST00000377038 KRT24Q2M2I5 525 aa15.78■□□□□ 0.12
DFFA-202ENST00000377038 LARP1BQ659C4 914 aaKnown RBP15.78■□□□□ 0.12
DFFA-202ENST00000377038 PLEKHH1Q9ULM0 1364 aa15.78■□□□□ 0.12
DFFA-202ENST00000377038 SIRT1Q96EB6 747 aa15.78■□□□□ 0.12
DFFA-202ENST00000377038 ANO8Q9HCE9 1232 aaPredicted RBP15.78■□□□□ 0.12
DFFA-202ENST00000377038 U3KPZ7 1027 aaPredicted RBP15.78■□□□□ 0.12
DFFA-202ENST00000377038 RNMTO43148 476 aaKnown RBP15.78■□□□□ 0.12
DFFA-202ENST00000377038 KSR2Q6VAB6 950 aa15.78■□□□□ 0.12
DFFA-202ENST00000377038 ECHDC1Q9NTX5 307 aa15.78■□□□□ 0.12
DFFA-202ENST00000377038 KDM5DQ9BY66 1539 aa15.77■□□□□ 0.12
DFFA-202ENST00000377038 POLR3DP05423 398 aaPredicted RBP15.77■□□□□ 0.12
DFFA-202ENST00000377038 OLFM4Q6UX06 510 aa15.77■□□□□ 0.12
DFFA-202ENST00000377038 TSPYL6Q8N831 410 aa15.77■□□□□ 0.12
DFFA-202ENST00000377038 CDK5RAP3Q96JB5 506 aa15.77■□□□□ 0.12
DFFA-202ENST00000377038 ZSCAN31Q96LW9 406 aaPredicted RBP15.77■□□□□ 0.12
DFFA-202ENST00000377038 NAPBQ9H115 298 aa15.77■□□□□ 0.12
DFFA-202ENST00000377038 MLH3Q9UHC1 1453 aa15.77■□□□□ 0.12
DFFA-202ENST00000377038 CDKL5O76039 1030 aa15.77■□□□□ 0.12
DFFA-202ENST00000377038 SOGA3Q5TF21 947 aa15.77■□□□□ 0.12
DFFA-202ENST00000377038 SLAIN2Q9P270 581 aa15.77■□□□□ 0.12
DFFA-202ENST00000377038 KINO60870 393 aaKnown RBP15.77■□□□□ 0.12
DFFA-202ENST00000377038 MPHOSPH10O00566 681 aaKnown RBP15.77■□□□□ 0.11
DFFA-202ENST00000377038 ST5P78524 1137 aa15.77■□□□□ 0.11
DFFA-202ENST00000377038 GOLIM4O00461 696 aa15.76■□□□□ 0.11
DFFA-202ENST00000377038 CCDC152Q4G0S7 254 aa15.76■□□□□ 0.11
DFFA-202ENST00000377038 PIBF1Q8WXW3 757 aa15.76■□□□□ 0.11
DFFA-202ENST00000377038 SETDB2Q96T68 719 aa15.76■□□□□ 0.11
DFFA-202ENST00000377038 SNRKQ9NRH2 765 aa15.76■□□□□ 0.11
DFFA-202ENST00000377038 IL13P35225 146 aa15.76■□□□□ 0.11
DFFA-202ENST00000377038 TXLNAP40222 546 aa15.76■□□□□ 0.11
DFFA-202ENST00000377038 TSHZ3Q63HK5 1081 aa15.76■□□□□ 0.11
DFFA-202ENST00000377038 CAVIN1Q6NZI2 390 aaKnown RBP15.76■□□□□ 0.11
DFFA-202ENST00000377038 ZNF622Q969S3 477 aaKnown RBP eCLIP15.76■□□□□ 0.11
DFFA-202ENST00000377038 WDR33Q9C0J8 1336 aaKnown RBP15.76■□□□□ 0.11
DFFA-202ENST00000377038 IGHDP01880 384 aa15.76■□□□□ 0.11
DFFA-202ENST00000377038 HECW2Q9P2P5 1572 aa15.75■□□□□ 0.11
DFFA-202ENST00000377038 MAGI2Q86UL8 1455 aa15.75■□□□□ 0.11
DFFA-202ENST00000377038 EFCAB6Q5THR3 1501 aa15.75■□□□□ 0.11
DFFA-202ENST00000377038 GRM8O00222 908 aa15.75■□□□□ 0.11
DFFA-202ENST00000377038 EVI5LQ96CN4 794 aa15.75■□□□□ 0.11
DFFA-202ENST00000377038 UPF3BQ9BZI7 483 aaKnown RBP15.75■□□□□ 0.11
DFFA-202ENST00000377038 NAT10Q9H0A0 1025 aaKnown RBP15.75■□□□□ 0.11
DFFA-202ENST00000377038 IPO7O95373 1038 aaKnown RBP15.75■□□□□ 0.11
DFFA-202ENST00000377038 CRACR2BQ8N4Y2 399 aaPredicted RBP15.75■□□□□ 0.11
DFFA-202ENST00000377038 NIP7Q9Y221 180 aaKnown RBP eCLIP15.75■□□□□ 0.11
DFFA-202ENST00000377038 DZIP3Q86Y13 1208 aaKnown RBP15.74■□□□□ 0.11
DFFA-202ENST00000377038 MKNK2Q9HBH9 465 aa15.74■□□□□ 0.11
DFFA-202ENST00000377038 TRAK2O60296 914 aa15.74■□□□□ 0.11
DFFA-202ENST00000377038 ALDH1L1O75891 902 aa15.74■□□□□ 0.11
DFFA-202ENST00000377038 MBD3O95983 291 aa15.74■□□□□ 0.11
DFFA-202ENST00000377038 ZNF287Q9HBT7 754 aa15.74■□□□□ 0.11
DFFA-202ENST00000377038 VAMP4O75379 141 aa15.74■□□□□ 0.11
DFFA-202ENST00000377038 JMYQ8N9B5 988 aa15.74■□□□□ 0.11
DFFA-202ENST00000377038 KDM6BO15054 1643 aa15.74■□□□□ 0.11
DFFA-202ENST00000377038 PTPRTO14522 1441 aa15.73■□□□□ 0.11
DFFA-202ENST00000377038 UGGT1Q9NYU2 1555 aa15.73■□□□□ 0.11
DFFA-202ENST00000377038 RHPN1Q8TCX5 695 aa15.73■□□□□ 0.11
DFFA-202ENST00000377038 DDX11Q96FC9 970 aa15.73■□□□□ 0.11
DFFA-202ENST00000377038 RNF214Q8ND24 703 aa15.73■□□□□ 0.11
DFFA-202ENST00000377038 ME1P48163 572 aa15.73■□□□□ 0.11
DFFA-202ENST00000377038 LMBR1LQ6UX01 489 aa15.73■□□□□ 0.11
DFFA-202ENST00000377038 ARHGEF10O15013 1369 aa15.72■□□□□ 0.11
DFFA-202ENST00000377038 PLEKHG3A1L390 1219 aa15.72■□□□□ 0.11
DFFA-202ENST00000377038 TTF1Q15361 905 aaPredicted RBP15.72■□□□□ 0.11
DFFA-202ENST00000377038 NPC1L1Q9UHC9 1359 aa15.72■□□□□ 0.11
DFFA-202ENST00000377038 KRT85P78386 507 aa15.71■□□□□ 0.11
DFFA-202ENST00000377038 ARID3AQ99856 593 aa15.71■□□□□ 0.11
DFFA-202ENST00000377038 ZNF213O14771 459 aa15.71■□□□□ 0.11
DFFA-202ENST00000377038 ANKRD18AQ8IVF6 992 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms