RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 NBPF14Q5TI25 921 aa17.14■□□□□ 0.34
NOTCH4-201ENST00000375023 ZNF354CQ86Y25 554 aa17.14■□□□□ 0.34
NOTCH4-201ENST00000375023 WDR63Q8IWG1 891 aa17.14■□□□□ 0.34
NOTCH4-201ENST00000375023 ZNF444Q8N0Y2 327 aaPredicted RBP17.14■□□□□ 0.33
NOTCH4-201ENST00000375023 MX1P20591 662 aa17.14■□□□□ 0.33
NOTCH4-201ENST00000375023 PRKG1Q13976 671 aa17.14■□□□□ 0.33
NOTCH4-201ENST00000375023 CACNA2D4Q7Z3S7 1137 aa17.14■□□□□ 0.33
NOTCH4-201ENST00000375023 MAP3K11Q16584 847 aa17.13■□□□□ 0.33
NOTCH4-201ENST00000375023 EMILIN1Q9Y6C2 1016 aa17.13■□□□□ 0.33
NOTCH4-201ENST00000375023 GOLGA6L10A0A0M3HER8 536 aa17.13■□□□□ 0.33
NOTCH4-201ENST00000375023 USP8P40818 1118 aa17.13■□□□□ 0.33
NOTCH4-201ENST00000375023 ATXN8OSP0DMR3 200 aa17.13■□□□□ 0.33
NOTCH4-201ENST00000375023 HSPA2P54652 639 aa17.13■□□□□ 0.33
NOTCH4-201ENST00000375023 JAKMIP3Q5VZ66 844 aa17.13■□□□□ 0.33
NOTCH4-201ENST00000375023 TFCP2L1Q9NZI6 479 aa17.13■□□□□ 0.33
NOTCH4-201ENST00000375023 ANXA1P04083 346 aa17.12■□□□□ 0.33
NOTCH4-201ENST00000375023 DYDC1Q8WWB3 177 aa17.12■□□□□ 0.33
NOTCH4-201ENST00000375023 ZFP91Q96JP5 570 aaPredicted RBP17.12■□□□□ 0.33
NOTCH4-201ENST00000375023 TFIP11Q9UBB9 837 aaKnown RBP17.12■□□□□ 0.33
NOTCH4-201ENST00000375023 NLRP5P59047 1200 aa17.12■□□□□ 0.33
NOTCH4-201ENST00000375023 IFIT5Q13325 482 aaKnown RBP17.12■□□□□ 0.33
NOTCH4-201ENST00000375023 UBE4AQ14139 1066 aa17.12■□□□□ 0.33
NOTCH4-201ENST00000375023 ZNF397Q8NF99 534 aaPredicted RBP17.12■□□□□ 0.33
NOTCH4-201ENST00000375023 PPP6R1Q9UPN7 881 aa17.12■□□□□ 0.33
NOTCH4-201ENST00000375023 TOM1O60784 492 aa17.12■□□□□ 0.33
NOTCH4-201ENST00000375023 TERF1P54274 439 aa17.12■□□□□ 0.33
NOTCH4-201ENST00000375023 VEZTQ9HBM0 779 aa17.12■□□□□ 0.33
NOTCH4-201ENST00000375023 CHRNA2Q15822 529 aa17.11■□□□□ 0.33
NOTCH4-201ENST00000375023 SLC12A7Q9Y666 1083 aa17.11■□□□□ 0.33
NOTCH4-201ENST00000375023 CCDC66A2RUB6 948 aa17.11■□□□□ 0.33
NOTCH4-201ENST00000375023 ZNF652Q9Y2D9 606 aa17.11■□□□□ 0.33
NOTCH4-201ENST00000375023 TNIP1Q15025 636 aa17.11■□□□□ 0.33
NOTCH4-201ENST00000375023 IQSEC3Q9UPP2 1182 aaPredicted RBP17.11■□□□□ 0.33
NOTCH4-201ENST00000375023 WASF1Q92558 559 aa17.11■□□□□ 0.33
NOTCH4-201ENST00000375023 TRERF1Q96PN7 1200 aa17.11■□□□□ 0.33
NOTCH4-201ENST00000375023 IFIT3O14879 490 aaKnown RBP17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 PPP4R3AQ6IN85 833 aa17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 C8orf76Q96K31 380 aa17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 CEP131Q9UPN4 1083 aa17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 GOLIM4O00461 696 aa17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 ZNF213O14771 459 aa17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 ERLIN1O75477 346 aa17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 KIF1BPQ96EK5 621 aa17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 ZSCAN31Q96LW9 406 aaPredicted RBP17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 PUF60Q9UHX1 559 aaKnown RBP17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 GOLGA8BA8MQT2 603 aa17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 SMTNL1A8MU46 457 aa17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 EXOC5O00471 708 aa17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 DESP17661 470 aa17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 TDRD12Q587J7 1177 aaKnown RBP17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 HSP90AA4PQ58FG1 418 aa17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 SERPINA10Q9UK55 444 aa17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 U3KPZ7 1027 aaPredicted RBP17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 SYNJ2O15056 1496 aa17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 SPA17Q15506 151 aa17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 NUP88Q99567 741 aaPredicted RBP17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 COMMD10Q9Y6G5 202 aa17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 ANKRD30BQ9BXX2 1392 aa17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 PRKCSHP14314 528 aaPredicted RBP17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 CASQ1P31415 396 aa17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 SAMM50Q9Y512 469 aa17.1■□□□□ 0.33
NOTCH4-201ENST00000375023 MCM4P33991 863 aa17.09■□□□□ 0.33
NOTCH4-201ENST00000375023 EZRP15311 586 aaKnown RBP17.09■□□□□ 0.33
NOTCH4-201ENST00000375023 KRT32Q14532 448 aa17.09■□□□□ 0.33
NOTCH4-201ENST00000375023 CCDC148Q8NFR7 591 aa17.09■□□□□ 0.33
NOTCH4-201ENST00000375023 SSH1Q8WYL5 1049 aa17.09■□□□□ 0.33
NOTCH4-201ENST00000375023 CBX1P83916 185 aa17.09■□□□□ 0.33
NOTCH4-201ENST00000375023 FAM83GA6ND36 823 aa17.09■□□□□ 0.33
NOTCH4-201ENST00000375023 GOLGA8AA7E2F4 631 aa17.09■□□□□ 0.33
NOTCH4-201ENST00000375023 URI1O94763 535 aaPredicted RBP17.09■□□□□ 0.33
NOTCH4-201ENST00000375023 MAP3K2Q9Y2U5 619 aa17.09■□□□□ 0.33
NOTCH4-201ENST00000375023 GSTTP1A0A1W2PQM5 241 aa17.08■□□□□ 0.33
NOTCH4-201ENST00000375023 SSRP1Q08945 709 aaKnown RBP17.08■□□□□ 0.33
NOTCH4-201ENST00000375023 AKAP2Q9Y2D5 859 aa17.08■□□□□ 0.33
NOTCH4-201ENST00000375023 A0A087WZG4 1122 aa17.08■□□□□ 0.33
NOTCH4-201ENST00000375023 RAB11FIP3O75154 756 aa17.08■□□□□ 0.33
NOTCH4-201ENST00000375023 SSFA2P28290 1259 aa17.08■□□□□ 0.33
NOTCH4-201ENST00000375023 TCERG1LQ5VWI1 586 aa17.08■□□□□ 0.33
NOTCH4-201ENST00000375023 LMOD1P29536 600 aaPredicted RBP17.08■□□□□ 0.32
NOTCH4-201ENST00000375023 EIF3JO75822 258 aaKnown RBP17.08■□□□□ 0.32
NOTCH4-201ENST00000375023 TRIM21P19474 475 aaKnown RBP17.08■□□□□ 0.32
NOTCH4-201ENST00000375023 PRPF4BQ13523 1007 aaKnown RBP17.08■□□□□ 0.32
NOTCH4-201ENST00000375023 POLR3GO15318 223 aaPredicted RBP17.08■□□□□ 0.32
NOTCH4-201ENST00000375023 MYO1BO43795 1136 aa17.08■□□□□ 0.32
NOTCH4-201ENST00000375023 FCHSD2O94868 740 aa17.07■□□□□ 0.32
NOTCH4-201ENST00000375023 MAP2K1Q02750 393 aaPredicted RBP17.07■□□□□ 0.32
NOTCH4-201ENST00000375023 CTCFLQ8NI51 663 aaPredicted RBP17.07■□□□□ 0.32
NOTCH4-201ENST00000375023 SLC5A1P13866 664 aa17.07■□□□□ 0.32
NOTCH4-201ENST00000375023 TSG101Q99816 390 aa17.07■□□□□ 0.32
NOTCH4-201ENST00000375023 PPP1R12BO60237 982 aaPredicted RBP17.07■□□□□ 0.32
NOTCH4-201ENST00000375023 HMGN5P82970 282 aaKnown RBP17.07■□□□□ 0.32
NOTCH4-201ENST00000375023 POTEJP0CG39 1038 aa17.07■□□□□ 0.32
NOTCH4-201ENST00000375023 MAP3K12Q12852 859 aa17.07■□□□□ 0.32
NOTCH4-201ENST00000375023 CUL5Q93034 780 aa17.07■□□□□ 0.32
NOTCH4-201ENST00000375023 RBM27Q9P2N5 1060 aaKnown RBP17.07■□□□□ 0.32
NOTCH4-201ENST00000375023 LARP1Q6PKG0 1096 aaKnown RBP17.06■□□□□ 0.32
NOTCH4-201ENST00000375023 FKBP15Q5T1M5 1219 aa17.06■□□□□ 0.32
NOTCH4-201ENST00000375023 SLFN5Q08AF3 891 aa17.06■□□□□ 0.32
NOTCH4-201ENST00000375023 LRRC2Q9BYS8 371 aa17.06■□□□□ 0.32
NOTCH4-201ENST00000375023 ST5P78524 1137 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms