RNA–Protein interactions for RNA: ENST00000374733.1

ABCA1-201, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-201ENST00000374733 AIDAQ96BJ3 306 aa15.38■□□□□ 0.05
ABCA1-201ENST00000374733 USP31Q70CQ4 1352 aa15.37■□□□□ 0.05
ABCA1-201ENST00000374733 C4AP0C0L4 1744 aa15.37■□□□□ 0.05
ABCA1-201ENST00000374733 NKX1-1Q15270 411 aaPredicted RBP15.37■□□□□ 0.05
ABCA1-201ENST00000374733 MFRPQ9BY79 579 aa15.37■□□□□ 0.05
ABCA1-201ENST00000374733 EVC2Q86UK5 1308 aa15.37■□□□□ 0.05
ABCA1-201ENST00000374733 MPRIPQ6WCQ1 1025 aa15.36■□□□□ 0.05
ABCA1-201ENST00000374733 TIAM2Q8IVF5 1701 aa15.36■□□□□ 0.05
ABCA1-201ENST00000374733 MAP2P11137 1827 aaKnown RBP15.36■□□□□ 0.05
ABCA1-201ENST00000374733 GNPATO15228 680 aa15.35■□□□□ 0.05
ABCA1-201ENST00000374733 VEGFAP15692 232 aaPredicted RBP15.35■□□□□ 0.05
ABCA1-201ENST00000374733 LBX1P52954 281 aa15.34■□□□□ 0.05
ABCA1-201ENST00000374733 LINC00116Q8NCU8 138 aa15.34■□□□□ 0.05
ABCA1-201ENST00000374733 DCAF5Q96JK2 942 aa15.34■□□□□ 0.05
ABCA1-201ENST00000374733 CCDC87Q9NVE4 849 aa15.34■□□□□ 0.05
ABCA1-201ENST00000374733 TNRC18O15417 2968 aaPredicted RBP15.33■□□□□ 0.05
ABCA1-201ENST00000374733 CCDC85CA6NKD9 419 aa15.33■□□□□ 0.04
ABCA1-201ENST00000374733 IP6K1Q92551 441 aa15.33■□□□□ 0.04
ABCA1-201ENST00000374733 CCDC88AQ3V6T2 1871 aa15.32■□□□□ 0.04
ABCA1-201ENST00000374733 KCNA3P22001 575 aa15.32■□□□□ 0.04
ABCA1-201ENST00000374733 FBXO22Q8NEZ5 403 aa15.32■□□□□ 0.04
ABCA1-201ENST00000374733 PIM2Q9P1W9 311 aa15.32■□□□□ 0.04
ABCA1-201ENST00000374733 PDE4DIPQ5VU43 2346 aa15.32■□□□□ 0.04
ABCA1-201ENST00000374733 RASSF7Q02833 373 aa15.31■□□□□ 0.04
ABCA1-201ENST00000374733 DALRD3Q5D0E6 543 aaKnown RBP15.31■□□□□ 0.04
ABCA1-201ENST00000374733 SMARCC1Q92922 1105 aaPredicted RBP15.31■□□□□ 0.04
ABCA1-201ENST00000374733 COLQQ9Y215 455 aaPredicted RBP15.31■□□□□ 0.04
ABCA1-201ENST00000374733 CNTNAP1P78357 1384 aa15.31■□□□□ 0.04
ABCA1-201ENST00000374733 VIRMAQ69YN4 1812 aaKnown RBP15.31■□□□□ 0.04
ABCA1-201ENST00000374733 PDCD7Q8N8D1 485 aaKnown RBP15.3■□□□□ 0.04
ABCA1-201ENST00000374733 SPRYD3Q8NCJ5 442 aa15.3■□□□□ 0.04
ABCA1-201ENST00000374733 SBNO2Q9Y2G9 1366 aa15.29■□□□□ 0.04
ABCA1-201ENST00000374733 ZC3H4Q9UPT8 1303 aaKnown RBP15.29■□□□□ 0.04
ABCA1-201ENST00000374733 GLTPD2A6NH11 291 aa15.29■□□□□ 0.04
ABCA1-201ENST00000374733 USHBP1Q8N6Y0 703 aa15.29■□□□□ 0.04
ABCA1-201ENST00000374733 LOC102724428A0A0B4J2F2 783 aa15.28■□□□□ 0.04
ABCA1-201ENST00000374733 RGS19P49795 217 aa15.28■□□□□ 0.04
ABCA1-201ENST00000374733 SIK1P57059 783 aa15.28■□□□□ 0.04
ABCA1-201ENST00000374733 TMF1P82094 1093 aa15.28■□□□□ 0.04
ABCA1-201ENST00000374733 PCDH11XQ9BZA7 1347 aa15.27■□□□□ 0.04
ABCA1-201ENST00000374733 PCDH11YQ9BZA8 1340 aa15.27■□□□□ 0.04
ABCA1-201ENST00000374733 GTPBP6O43824 516 aaPredicted RBP15.27■□□□□ 0.04
ABCA1-201ENST00000374733 NLGN1Q8N2Q7 840 aa15.27■□□□□ 0.04
ABCA1-201ENST00000374733 PARP3Q9Y6F1 533 aa15.27■□□□□ 0.04
ABCA1-201ENST00000374733 KDM6AO15550 1401 aaPredicted RBP15.26■□□□□ 0.03
ABCA1-201ENST00000374733 POTEFA5A3E0 1075 aa15.26■□□□□ 0.03
ABCA1-201ENST00000374733 HSPA8P11142 646 aaKnown RBP15.26■□□□□ 0.03
ABCA1-201ENST00000374733 ITPK1Q13572 414 aa15.26■□□□□ 0.03
ABCA1-201ENST00000374733 RAPGEF4Q8WZA2 1011 aa15.26■□□□□ 0.03
ABCA1-201ENST00000374733 CFAP44Q96MT7 982 aa15.26■□□□□ 0.03
ABCA1-201ENST00000374733 CD163L1Q9NR16 1453 aa15.26■□□□□ 0.03
ABCA1-201ENST00000374733 CGNL1Q0VF96 1302 aa15.25■□□□□ 0.03
ABCA1-201ENST00000374733 CHRNA5P30532 468 aa15.25■□□□□ 0.03
ABCA1-201ENST00000374733 HOXC9P31274 260 aa15.25■□□□□ 0.03
ABCA1-201ENST00000374733 VEGFBP49765 207 aa15.25■□□□□ 0.03
ABCA1-201ENST00000374733 PIGBQ92521 554 aa15.25■□□□□ 0.03
ABCA1-201ENST00000374733 L3MBTL3Q96JM7 780 aaPredicted RBP15.25■□□□□ 0.03
ABCA1-201ENST00000374733 MS4A4AQ96JQ5 239 aa15.25■□□□□ 0.03
ABCA1-201ENST00000374733 WBP1LQ9NX94 342 aa15.25■□□□□ 0.03
ABCA1-201ENST00000374733 MAP3K19Q56UN5 1328 aa15.24■□□□□ 0.03
ABCA1-201ENST00000374733 RAB3GAP2Q9H2M9 1393 aa15.24■□□□□ 0.03
ABCA1-201ENST00000374733 POTECB2RU33 542 aa15.23■□□□□ 0.03
ABCA1-201ENST00000374733 TATP17735 454 aaPredicted RBP15.23■□□□□ 0.03
ABCA1-201ENST00000374733 LMNB1P20700 586 aa15.23■□□□□ 0.03
ABCA1-201ENST00000374733 ATP6V1AP38606 617 aa15.23■□□□□ 0.03
ABCA1-201ENST00000374733 AMPHP49418 695 aa15.23■□□□□ 0.03
ABCA1-201ENST00000374733 TRAPPC3LQ5T215 181 aa15.23■□□□□ 0.03
ABCA1-201ENST00000374733 NBPF6Q5VWK0 638 aa15.23■□□□□ 0.03
ABCA1-201ENST00000374733 PAXIP1Q6ZW49 1069 aaPredicted RBP15.23■□□□□ 0.03
ABCA1-201ENST00000374733 NBPF4Q96M43 638 aa15.23■□□□□ 0.03
ABCA1-201ENST00000374733 CYP27B1O15528 508 aa15.22■□□□□ 0.03
ABCA1-201ENST00000374733 GYS1P13807 737 aa15.22■□□□□ 0.03
ABCA1-201ENST00000374733 RTCBQ9Y3I0 505 aaKnown RBP15.22■□□□□ 0.03
ABCA1-201ENST00000374733 EDC4Q6P2E9 1401 aaKnown RBP15.22■□□□□ 0.03
ABCA1-201ENST00000374733 G3V3G9 751 aa15.21■□□□□ 0.03
ABCA1-201ENST00000374733 POTEJP0CG39 1038 aa15.21■□□□□ 0.03
ABCA1-201ENST00000374733 FBLN1P23142 703 aa15.2■□□□□ 0.02
ABCA1-201ENST00000374733 ARHGEF1Q92888 912 aaKnown RBP15.2■□□□□ 0.02
ABCA1-201ENST00000374733 COL5A3P25940 1745 aaPredicted RBP15.2■□□□□ 0.02
ABCA1-201ENST00000374733 RFC4P35249 363 aa15.19■□□□□ 0.02
ABCA1-201ENST00000374733 DPY19L2Q6NUT2 758 aa15.19■□□□□ 0.02
ABCA1-201ENST00000374733 TMC1Q8TDI8 760 aa15.19■□□□□ 0.02
ABCA1-201ENST00000374733 ASAP1Q9ULH1 1129 aa15.19■□□□□ 0.02
ABCA1-201ENST00000374733 SMG6Q86US8 1419 aaKnown RBP15.18■□□□□ 0.02
ABCA1-201ENST00000374733 HDGFL2Q7Z4V5 671 aaPredicted RBP15.18■□□□□ 0.02
ABCA1-201ENST00000374733 DLEC1Q9Y238 1755 aa15.18■□□□□ 0.02
ABCA1-201ENST00000374733 DICER1Q9UPY3 1922 aaKnown RBP15.17■□□□□ 0.02
ABCA1-201ENST00000374733 PASKQ96RG2 1323 aa15.17■□□□□ 0.02
ABCA1-201ENST00000374733 DDR1Q08345 913 aa15.16■□□□□ 0.02
ABCA1-201ENST00000374733 TMOD3Q9NYL9 352 aa15.16■□□□□ 0.02
ABCA1-201ENST00000374733 BOLA1Q9Y3E2 137 aa15.16■□□□□ 0.02
ABCA1-201ENST00000374733 A0A1W2PP64 1363 aa15.15■□□□□ 0.02
ABCA1-201ENST00000374733 RTL1A6NKG5 1358 aa15.15■□□□□ 0.02
ABCA1-201ENST00000374733 MYH14Q7Z406 1995 aaKnown RBP15.15■□□□□ 0.02
ABCA1-201ENST00000374733 TMEM88BA6NKF7 163 aa15.15■□□□□ 0.02
ABCA1-201ENST00000374733 PLCB2Q00722 1185 aa15.15■□□□□ 0.02
ABCA1-201ENST00000374733 KDRP35968 1356 aa15.14■□□□□ 0.01
ABCA1-201ENST00000374733 MAP2K1Q02750 393 aaPredicted RBP15.14■□□□□ 0.01
ABCA1-201ENST00000374733 NFKBIEO00221 500 aa15.13■□□□□ 0.01
ABCA1-201ENST00000374733 COG3Q96JB2 828 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms