RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 C8orf58Q8NAV2 365 aa13.54□□□□□ -0.24
RPRD1B-201ENST00000373433 C8orf37Q96NL8 207 aa13.54□□□□□ -0.24
RPRD1B-201ENST00000373433 ZGPATQ8N5A5 531 aaKnown RBP13.54□□□□□ -0.24
RPRD1B-201ENST00000373433 CDK12Q9NYV4 1490 aaPredicted RBP13.54□□□□□ -0.24
RPRD1B-201ENST00000373433 RABEP1Q15276 862 aa13.54□□□□□ -0.24
RPRD1B-201ENST00000373433 TSPYL6Q8N831 410 aa13.54□□□□□ -0.24
RPRD1B-201ENST00000373433 TMEM63CQ9P1W3 806 aa13.54□□□□□ -0.24
RPRD1B-201ENST00000373433 MCM5P33992 734 aa13.53□□□□□ -0.24
RPRD1B-201ENST00000373433 FGD1P98174 961 aa13.53□□□□□ -0.24
RPRD1B-201ENST00000373433 ZCRB1Q8TBF4 217 aaKnown RBP13.53□□□□□ -0.24
RPRD1B-201ENST00000373433 IQSEC2Q5JU85 1478 aa13.53□□□□□ -0.24
RPRD1B-201ENST00000373433 EXOC5O00471 708 aa13.53□□□□□ -0.24
RPRD1B-201ENST00000373433 DDX58O95786 925 aaKnown RBP13.53□□□□□ -0.24
RPRD1B-201ENST00000373433 FOXD4L6Q3SYB3 417 aaPredicted RBP13.53□□□□□ -0.24
RPRD1B-201ENST00000373433 LRSAM1Q6UWE0 723 aa13.53□□□□□ -0.24
RPRD1B-201ENST00000373433 FOXD4L3Q6VB84 417 aaPredicted RBP13.53□□□□□ -0.24
RPRD1B-201ENST00000373433 CLEC17AQ6ZS10 378 aa13.53□□□□□ -0.24
RPRD1B-201ENST00000373433 NOL8Q76FK4 1167 aaKnown RBP13.53□□□□□ -0.24
RPRD1B-201ENST00000373433 NEXNQ0ZGT2 675 aa13.53□□□□□ -0.24
RPRD1B-201ENST00000373433 C9orf78Q9NZ63 289 aaPredicted RBP13.52□□□□□ -0.24
RPRD1B-201ENST00000373433 USP31Q70CQ4 1352 aa13.52□□□□□ -0.24
RPRD1B-201ENST00000373433 HMMRO75330 724 aa13.52□□□□□ -0.25
RPRD1B-201ENST00000373433 DMTNQ08495 405 aa13.52□□□□□ -0.25
RPRD1B-201ENST00000373433 ALDH1L2Q3SY69 923 aa13.52□□□□□ -0.25
RPRD1B-201ENST00000373433 ZNF830Q96NB3 372 aaPredicted RBP13.52□□□□□ -0.25
RPRD1B-201ENST00000373433 IGSF1Q8N6C5 1336 aa13.52□□□□□ -0.25
RPRD1B-201ENST00000373433 MAP3K5Q99683 1374 aa13.52□□□□□ -0.25
RPRD1B-201ENST00000373433 HTATSF1O43719 755 aaKnown RBP13.52□□□□□ -0.25
RPRD1B-201ENST00000373433 IL2RBP14784 551 aa13.52□□□□□ -0.25
RPRD1B-201ENST00000373433 RIC3Q7Z5B4 369 aa13.52□□□□□ -0.25
RPRD1B-201ENST00000373433 PNPLA6Q8IY17 1366 aa13.52□□□□□ -0.25
RPRD1B-201ENST00000373433 MYL6BP14649 208 aa13.51□□□□□ -0.25
RPRD1B-201ENST00000373433 NSFL1CQ9UNZ2 370 aaKnown RBP13.51□□□□□ -0.25
RPRD1B-201ENST00000373433 AXIN2Q9Y2T1 843 aa13.51□□□□□ -0.25
RPRD1B-201ENST00000373433 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.51□□□□□ -0.25
RPRD1B-201ENST00000373433 NRXN3Q9Y4C0 1643 aa13.51□□□□□ -0.25
RPRD1B-201ENST00000373433 LGR6Q9HBX8 967 aa13.51□□□□□ -0.25
RPRD1B-201ENST00000373433 SLC39A6Q13433 755 aa13.5□□□□□ -0.25
RPRD1B-201ENST00000373433 GCC1Q96CN9 775 aa13.5□□□□□ -0.25
RPRD1B-201ENST00000373433 OVOS2A0A0J9YW53 1432 aa13.5□□□□□ -0.25
RPRD1B-201ENST00000373433 OVOS2Q6IE36 1432 aa13.5□□□□□ -0.25
RPRD1B-201ENST00000373433 ST18O60284 1047 aa13.5□□□□□ -0.25
RPRD1B-201ENST00000373433 ERBB3P21860 1342 aa13.5□□□□□ -0.25
RPRD1B-201ENST00000373433 NFATC2IPQ8NCF5 419 aa13.5□□□□□ -0.25
RPRD1B-201ENST00000373433 TMOD3Q9NYL9 352 aa13.5□□□□□ -0.25
RPRD1B-201ENST00000373433 ZSCAN20P17040 1043 aaPredicted RBP13.49□□□□□ -0.25
RPRD1B-201ENST00000373433 PLCB2Q00722 1185 aa13.49□□□□□ -0.25
RPRD1B-201ENST00000373433 HDAC5Q9UQL6 1122 aa13.49□□□□□ -0.25
RPRD1B-201ENST00000373433 VAMP4O75379 141 aa13.49□□□□□ -0.25
RPRD1B-201ENST00000373433 PPP4R3BQ5MIZ7 849 aa13.49□□□□□ -0.25
RPRD1B-201ENST00000373433 C17orf53Q8N3J3 647 aaPredicted RBP13.49□□□□□ -0.25
RPRD1B-201ENST00000373433 MYRIPQ8NFW9 859 aa13.49□□□□□ -0.25
RPRD1B-201ENST00000373433 SHPRHQ149N8 1683 aa13.49□□□□□ -0.25
RPRD1B-201ENST00000373433 KIF24Q5T7B8 1368 aa13.49□□□□□ -0.25
RPRD1B-201ENST00000373433 RTL1A6NKG5 1358 aa13.49□□□□□ -0.25
RPRD1B-201ENST00000373433 SPDYE4A6NLX3 237 aa13.48□□□□□ -0.25
RPRD1B-201ENST00000373433 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.48□□□□□ -0.25
RPRD1B-201ENST00000373433 F6X3S4 739 aa13.48□□□□□ -0.25
RPRD1B-201ENST00000373433 LARP1Q6PKG0 1096 aaKnown RBP13.48□□□□□ -0.25
RPRD1B-201ENST00000373433 TSPY26PQ9H489 355 aa13.48□□□□□ -0.25
RPRD1B-201ENST00000373433 RNMTO43148 476 aaKnown RBP13.47□□□□□ -0.25
RPRD1B-201ENST00000373433 GTF2E1P29083 439 aaPredicted RBP13.47□□□□□ -0.25
RPRD1B-201ENST00000373433 CWC22Q9HCG8 908 aaKnown RBP13.47□□□□□ -0.25
RPRD1B-201ENST00000373433 IGSF3O75054 1194 aa13.47□□□□□ -0.25
RPRD1B-201ENST00000373433 ANXA1P04083 346 aa13.47□□□□□ -0.25
RPRD1B-201ENST00000373433 NCBP3Q53F19 620 aaKnown RBP13.47□□□□□ -0.25
RPRD1B-201ENST00000373433 TNS3Q68CZ2 1445 aa13.47□□□□□ -0.25
RPRD1B-201ENST00000373433 CHL1O00533 1208 aa13.47□□□□□ -0.25
RPRD1B-201ENST00000373433 CYP2E1P05181 493 aaPredicted RBP13.47□□□□□ -0.25
RPRD1B-201ENST00000373433 GSPT1P15170 499 aaKnown RBP13.47□□□□□ -0.25
RPRD1B-201ENST00000373433 UTP14CQ5TAP6 766 aaKnown RBP13.47□□□□□ -0.25
RPRD1B-201ENST00000373433 IL17REQ8NFR9 667 aa13.47□□□□□ -0.25
RPRD1B-201ENST00000373433 TRIM6-TRIM34B2RNG4 842 aa13.46□□□□□ -0.26
RPRD1B-201ENST00000373433 TTC12Q9H892 705 aaPredicted RBP13.46□□□□□ -0.26
RPRD1B-201ENST00000373433 ITSN1Q15811 1721 aa13.46□□□□□ -0.26
RPRD1B-201ENST00000373433 MBD3O95983 291 aa13.45□□□□□ -0.26
RPRD1B-201ENST00000373433 UBTFL1P0CB47 393 aaPredicted RBP13.45□□□□□ -0.26
RPRD1B-201ENST00000373433 HMGN5P82970 282 aaKnown RBP13.45□□□□□ -0.26
RPRD1B-201ENST00000373433 DCAF5Q96JK2 942 aa13.45□□□□□ -0.26
RPRD1B-201ENST00000373433 MST1RQ04912 1400 aa13.45□□□□□ -0.26
RPRD1B-201ENST00000373433 FMNL2Q96PY5 1086 aa13.45□□□□□ -0.26
RPRD1B-201ENST00000373433 USP25Q9UHP3 1055 aa13.45□□□□□ -0.26
RPRD1B-201ENST00000373433 ZDHHC9Q9Y397 364 aa13.45□□□□□ -0.26
RPRD1B-201ENST00000373433 KIF3AQ9Y496 699 aa13.45□□□□□ -0.26
RPRD1B-201ENST00000373433 DDB1Q16531 1140 aa13.45□□□□□ -0.26
RPRD1B-201ENST00000373433 ZBTB7BO15156 539 aaPredicted RBP13.44□□□□□ -0.26
RPRD1B-201ENST00000373433 FLIIQ13045 1269 aa13.44□□□□□ -0.26
RPRD1B-201ENST00000373433 NOLC1Q14978 699 aaKnown RBP eCLIP13.44□□□□□ -0.26
RPRD1B-201ENST00000373433 INTS3Q68E01 1043 aaKnown RBP13.44□□□□□ -0.26
RPRD1B-201ENST00000373433 CASC1Q6TDU7 716 aa13.44□□□□□ -0.26
RPRD1B-201ENST00000373433 ZNF710Q8N1W2 664 aa13.44□□□□□ -0.26
RPRD1B-201ENST00000373433 GDPD2Q9HCC8 539 aa13.44□□□□□ -0.26
RPRD1B-201ENST00000373433 CCT4P50991 539 aaKnown RBP13.44□□□□□ -0.26
RPRD1B-201ENST00000373433 C16orf71Q8IYS4 520 aaPredicted RBP13.44□□□□□ -0.26
RPRD1B-201ENST00000373433 USP26Q9BXU7 913 aa13.44□□□□□ -0.26
RPRD1B-201ENST00000373433 DBF4Q9UBU7 674 aaPredicted RBP13.44□□□□□ -0.26
RPRD1B-201ENST00000373433 GNAI3P08754 354 aa13.44□□□□□ -0.26
RPRD1B-201ENST00000373433 ATP2B3Q16720 1220 aa13.44□□□□□ -0.26
RPRD1B-201ENST00000373433 BBXQ8WY36 941 aaPredicted RBP13.44□□□□□ -0.26
RPRD1B-201ENST00000373433 SRCIN1Q9C0H9 1055 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms