RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 IFT57Q9NWB7 429 aa7.99□□□□□ -1.13
CHD6-202ENST00000373222 TMEM2Q9UHN6 1383 aa7.99□□□□□ -1.13
CHD6-202ENST00000373222 TTC21BQ7Z4L5 1316 aa7.99□□□□□ -1.13
CHD6-202ENST00000373222 BECN1Q14457 450 aa7.98□□□□□ -1.13
CHD6-202ENST00000373222 OTUD7AQ8TE49 926 aaPredicted RBP7.98□□□□□ -1.13
CHD6-202ENST00000373222 NRKQ7Z2Y5 1582 aa7.98□□□□□ -1.13
CHD6-202ENST00000373222 RIMBP2O15034 1052 aa7.98□□□□□ -1.13
CHD6-202ENST00000373222 RGS20O76081 388 aa7.98□□□□□ -1.13
CHD6-202ENST00000373222 GPIHBP1Q8IV16 184 aa7.98□□□□□ -1.13
CHD6-202ENST00000373222 PNNQ9H307 717 aaKnown RBP7.98□□□□□ -1.13
CHD6-202ENST00000373222 PTCH1Q13635 1447 aa7.98□□□□□ -1.13
CHD6-202ENST00000373222 ABCC4O15439 1325 aa7.98□□□□□ -1.13
CHD6-202ENST00000373222 VARS2Q5ST30 1063 aaKnown RBP7.97□□□□□ -1.13
CHD6-202ENST00000373222 FAM212AQ96EL1 285 aa7.97□□□□□ -1.13
CHD6-202ENST00000373222 AATKQ6ZMQ8 1374 aa7.97□□□□□ -1.13
CHD6-202ENST00000373222 SMARCA5O60264 1052 aaPredicted RBP7.97□□□□□ -1.13
CHD6-202ENST00000373222 NUBP1P53384 320 aa7.97□□□□□ -1.13
CHD6-202ENST00000373222 TECPR2O15040 1411 aa7.96□□□□□ -1.13
CHD6-202ENST00000373222 G2E3Q7L622 706 aa7.96□□□□□ -1.13
CHD6-202ENST00000373222 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.96□□□□□ -1.13
CHD6-202ENST00000373222 KIF2CQ99661 725 aa7.96□□□□□ -1.13
CHD6-202ENST00000373222 MAP3K19Q56UN5 1328 aa7.96□□□□□ -1.13
CHD6-202ENST00000373222 TOPAZ1Q8N9V7 1692 aa7.96□□□□□ -1.14
CHD6-202ENST00000373222 RGS12O14924 1447 aa7.96□□□□□ -1.14
CHD6-202ENST00000373222 F6X3S4 739 aa7.96□□□□□ -1.14
CHD6-202ENST00000373222 GSPT1P15170 499 aaKnown RBP7.96□□□□□ -1.14
CHD6-202ENST00000373222 OVOS2A0A0J9YW53 1432 aa7.96□□□□□ -1.14
CHD6-202ENST00000373222 OVOS2Q6IE36 1432 aa7.96□□□□□ -1.14
CHD6-202ENST00000373222 TBC1D9Q6ZT07 1266 aa7.95□□□□□ -1.14
CHD6-202ENST00000373222 MEIS3Q99687 375 aa7.95□□□□□ -1.14
CHD6-202ENST00000373222 MSH6P52701 1360 aa7.95□□□□□ -1.14
CHD6-202ENST00000373222 PIK3R4Q99570 1358 aa7.95□□□□□ -1.14
CHD6-202ENST00000373222 USP6P35125 1406 aa7.95□□□□□ -1.14
CHD6-202ENST00000373222 FMN2Q9NZ56 1722 aa7.95□□□□□ -1.14
CHD6-202ENST00000373222 MTHFSDQ2M296 383 aaKnown RBP7.95□□□□□ -1.14
CHD6-202ENST00000373222 ZNF592Q92610 1267 aa7.95□□□□□ -1.14
CHD6-202ENST00000373222 ZSWIM6Q9HCJ5 1215 aa7.95□□□□□ -1.14
CHD6-202ENST00000373222 RGPD1P0DJD0 1748 aa7.95□□□□□ -1.14
CHD6-202ENST00000373222 CEP170BQ9Y4F5 1589 aaPredicted RBP7.94□□□□□ -1.14
CHD6-202ENST00000373222 HCSTQ9UBK5 93 aa7.94□□□□□ -1.14
CHD6-202ENST00000373222 NALCNQ8IZF0 1738 aa7.94□□□□□ -1.14
CHD6-202ENST00000373222 TSHZ3Q63HK5 1081 aa7.94□□□□□ -1.14
CHD6-202ENST00000373222 LTV1Q96GA3 475 aaPredicted RBP7.94□□□□□ -1.14
CHD6-202ENST00000373222 ATP10DQ9P241 1426 aa7.94□□□□□ -1.14
CHD6-202ENST00000373222 CHL1O00533 1208 aa7.93□□□□□ -1.14
CHD6-202ENST00000373222 BMP2KLQ5H9B9 411 aa7.93□□□□□ -1.14
CHD6-202ENST00000373222 SLC4A10Q6U841 1118 aa7.93□□□□□ -1.14
CHD6-202ENST00000373222 USHBP1Q8N6Y0 703 aa7.93□□□□□ -1.14
CHD6-202ENST00000373222 ARHGAP45Q92619 1136 aa7.93□□□□□ -1.14
CHD6-202ENST00000373222 PLEKHM2Q8IWE5 1019 aa7.93□□□□□ -1.14
CHD6-202ENST00000373222 PIK3C2AO00443 1686 aa7.92□□□□□ -1.14
CHD6-202ENST00000373222 CRB1P82279 1406 aa7.92□□□□□ -1.14
CHD6-202ENST00000373222 CALD1Q05682 793 aaKnown RBP7.92□□□□□ -1.14
CHD6-202ENST00000373222 NGDNQ8NEJ9 315 aaKnown RBP7.92□□□□□ -1.14
CHD6-202ENST00000373222 EYA1Q99502 592 aa7.92□□□□□ -1.14
CHD6-202ENST00000373222 GOPCQ9HD26 462 aa7.92□□□□□ -1.14
CHD6-202ENST00000373222 MCM4P33991 863 aa7.92□□□□□ -1.14
CHD6-202ENST00000373222 LMOD3Q0VAK6 560 aa7.92□□□□□ -1.14
CHD6-202ENST00000373222 GCC1Q96CN9 775 aa7.92□□□□□ -1.14
CHD6-202ENST00000373222 PANK2Q9BZ23 570 aa7.92□□□□□ -1.14
CHD6-202ENST00000373222 SSH2Q76I76 1423 aa7.91□□□□□ -1.14
CHD6-202ENST00000373222 CEP85Q6P2H3 762 aa7.91□□□□□ -1.14
CHD6-202ENST00000373222 HSCBQ8IWL3 235 aa7.91□□□□□ -1.14
CHD6-202ENST00000373222 API5Q9BZZ5 524 aaKnown RBP7.91□□□□□ -1.14
CHD6-202ENST00000373222 ANO8Q9HCE9 1232 aaPredicted RBP7.91□□□□□ -1.14
CHD6-202ENST00000373222 RTL1A6NKG5 1358 aa7.91□□□□□ -1.14
CHD6-202ENST00000373222 PLEKHG1Q9ULL1 1385 aa7.91□□□□□ -1.14
CHD6-202ENST00000373222 MARF1Q9Y4F3 1742 aaKnown RBP7.91□□□□□ -1.14
CHD6-202ENST00000373222 KCNA6P17658 529 aa7.91□□□□□ -1.14
CHD6-202ENST00000373222 MLLT3P42568 568 aaPredicted RBP7.91□□□□□ -1.14
CHD6-202ENST00000373222 DCAF8Q5TAQ9 597 aa7.91□□□□□ -1.14
CHD6-202ENST00000373222 INTS3Q68E01 1043 aaKnown RBP7.91□□□□□ -1.14
CHD6-202ENST00000373222 TMED8Q6PL24 325 aaPredicted RBP7.91□□□□□ -1.14
CHD6-202ENST00000373222 TSPYL4Q9UJ04 414 aa7.91□□□□□ -1.14
CHD6-202ENST00000373222 DIP2AQ14689 1571 aa7.9□□□□□ -1.14
CHD6-202ENST00000373222 AMPHP49418 695 aa7.9□□□□□ -1.14
CHD6-202ENST00000373222 HDGFP51858 240 aaKnown RBP7.9□□□□□ -1.14
CHD6-202ENST00000373222 NLRP6P59044 892 aa7.9□□□□□ -1.14
CHD6-202ENST00000373222 GAS2L2Q8NHY3 880 aa7.9□□□□□ -1.14
CHD6-202ENST00000373222 SIRT1Q96EB6 747 aa7.9□□□□□ -1.14
CHD6-202ENST00000373222 DCTPP1Q9H773 170 aa7.9□□□□□ -1.14
CHD6-202ENST00000373222 DDIT3P35638 169 aa7.9□□□□□ -1.15
CHD6-202ENST00000373222 KCNA1Q09470 495 aa7.9□□□□□ -1.15
CHD6-202ENST00000373222 PARP9Q8IXQ6 854 aa7.9□□□□□ -1.15
CHD6-202ENST00000373222 EXOC6BQ9Y2D4 811 aa7.9□□□□□ -1.15
CHD6-202ENST00000373222 USP31Q70CQ4 1352 aa7.9□□□□□ -1.15
CHD6-202ENST00000373222 RGPD2P0DJD1 1756 aa7.89□□□□□ -1.15
CHD6-202ENST00000373222 HSP90AB1P08238 724 aaKnown RBP7.89□□□□□ -1.15
CHD6-202ENST00000373222 ANKRD44Q8N8A2 993 aa7.89□□□□□ -1.15
CHD6-202ENST00000373222 TNPO1Q92973 898 aaKnown RBP7.89□□□□□ -1.15
CHD6-202ENST00000373222 CHAMP1Q96JM3 812 aa7.89□□□□□ -1.15
CHD6-202ENST00000373222 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.89□□□□□ -1.156e-8■■□□□ 14.2
CHD6-202ENST00000373222 CHMP5Q9NZZ3 219 aa7.89□□□□□ -1.15
CHD6-202ENST00000373222 BCCIPQ9P287 314 aaKnown RBP eCLIP7.89□□□□□ -1.15
CHD6-202ENST00000373222 NCOA3Q9Y6Q9 1424 aa7.89□□□□□ -1.15
CHD6-202ENST00000373222 G3V3G9 751 aa7.89□□□□□ -1.15
CHD6-202ENST00000373222 KDM4AO75164 1064 aa7.89□□□□□ -1.15
CHD6-202ENST00000373222 BRD1O95696 1058 aa7.89□□□□□ -1.15
CHD6-202ENST00000373222 SDSP20132 328 aa7.89□□□□□ -1.15
CHD6-202ENST00000373222 TTC22Q5TAA0 569 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms