RNA–Protein interactions for RNA: ENST00000373115.4

CHST3-201, Transcript of carbohydrate sulfotransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHST3, Length 6,970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST3-201ENST00000373115 TTC16Q8NEE8 873 aa18.06■□□□□ 0.48
CHST3-201ENST00000373115 THUMPD2Q9BTF0 503 aaKnown RBP18.06■□□□□ 0.48
CHST3-201ENST00000373115 YEATS4O95619 227 aa18.06■□□□□ 0.48
CHST3-201ENST00000373115 CADPSQ9ULU8 1353 aa18.06■□□□□ 0.48
CHST3-201ENST00000373115 FSIP1Q8NA03 581 aa18.06■□□□□ 0.48
CHST3-201ENST00000373115 RANBP6O60518 1105 aaKnown RBP18.06■□□□□ 0.48
CHST3-201ENST00000373115 SSRP1Q08945 709 aaKnown RBP18.05■□□□□ 0.48
CHST3-201ENST00000373115 TNPO1Q92973 898 aaKnown RBP18.05■□□□□ 0.48
CHST3-201ENST00000373115 KIF1BPQ96EK5 621 aa18.05■□□□□ 0.48
CHST3-201ENST00000373115 TFIP11Q9UBB9 837 aaKnown RBP18.05■□□□□ 0.48
CHST3-201ENST00000373115 PPFIA3O75145 1194 aa18.05■□□□□ 0.48
CHST3-201ENST00000373115 MTIF2P46199 727 aaKnown RBP18.05■□□□□ 0.48
CHST3-201ENST00000373115 NAPBQ9H115 298 aa18.05■□□□□ 0.48
CHST3-201ENST00000373115 CCDC8Q9H0W5 538 aaPredicted RBP18.04■□□□□ 0.48
CHST3-201ENST00000373115 MCM10Q7L590 875 aa18.04■□□□□ 0.48
CHST3-201ENST00000373115 RPAP2Q8IXW5 612 aaPredicted RBP18.04■□□□□ 0.48
CHST3-201ENST00000373115 SLC12A7Q9Y666 1083 aa18.04■□□□□ 0.48
CHST3-201ENST00000373115 CRACR2BQ8N4Y2 399 aaPredicted RBP18.04■□□□□ 0.48
CHST3-201ENST00000373115 SCAND2PQ9GZW5 306 aaPredicted RBP18.04■□□□□ 0.48
CHST3-201ENST00000373115 NOP2P46087 812 aaKnown RBP18.04■□□□□ 0.48
CHST3-201ENST00000373115 CCDC96Q2M329 555 aa18.04■□□□□ 0.48
CHST3-201ENST00000373115 MYD88Q99836 296 aa18.04■□□□□ 0.48
CHST3-201ENST00000373115 PANK2Q9BZ23 570 aa18.04■□□□□ 0.48
CHST3-201ENST00000373115 ERBINQ96RT1 1412 aa18.04■□□□□ 0.48
CHST3-201ENST00000373115 ZBTB9Q96C00 473 aa18.04■□□□□ 0.48
CHST3-201ENST00000373115 IFIT1P09914 478 aaKnown RBP18.03■□□□□ 0.48
CHST3-201ENST00000373115 PPP4R3AQ6IN85 833 aa18.03■□□□□ 0.48
CHST3-201ENST00000373115 NLRP5P59047 1200 aa18.03■□□□□ 0.48
CHST3-201ENST00000373115 SNW1Q13573 536 aaKnown RBP18.03■□□□□ 0.48
CHST3-201ENST00000373115 COMMD10Q9Y6G5 202 aa18.03■□□□□ 0.48
CHST3-201ENST00000373115 LRRC9Q6ZRR7 1453 aa18.03■□□□□ 0.48
CHST3-201ENST00000373115 RAB11FIP3O75154 756 aa18.03■□□□□ 0.48
CHST3-201ENST00000373115 FGFR1OPO95684 399 aaKnown RBP18.03■□□□□ 0.48
CHST3-201ENST00000373115 GNAT3A8MTJ3 354 aa18.03■□□□□ 0.48
CHST3-201ENST00000373115 SLC4A8Q2Y0W8 1093 aa18.03■□□□□ 0.48
CHST3-201ENST00000373115 CCDC150Q8NCX0 1101 aa18.03■□□□□ 0.48
CHST3-201ENST00000373115 JADE2Q9NQC1 790 aa18.03■□□□□ 0.48
CHST3-201ENST00000373115 CEP135Q66GS9 1140 aa18.02■□□□□ 0.48
CHST3-201ENST00000373115 PPM1EQ8WY54 764 aa18.02■□□□□ 0.48
CHST3-201ENST00000373115 ALS2CR12Q96Q35 445 aa18.02■□□□□ 0.48
CHST3-201ENST00000373115 C20orf194Q5TEA3 1177 aa18.02■□□□□ 0.48
CHST3-201ENST00000373115 DUSP27Q5VZP5 1158 aa18.02■□□□□ 0.48
CHST3-201ENST00000373115 GJB2P29033 226 aa18.02■□□□□ 0.48
CHST3-201ENST00000373115 ANKRD30BQ9BXX2 1392 aa18.02■□□□□ 0.48
CHST3-201ENST00000373115 TMPOP42166 694 aaKnown RBP18.02■□□□□ 0.47
CHST3-201ENST00000373115 FERMT2Q96AC1 680 aa18.02■□□□□ 0.47
CHST3-201ENST00000373115 DRC1Q96MC2 740 aa18.02■□□□□ 0.47
CHST3-201ENST00000373115 MMRN2Q9H8L6 949 aa18.02■□□□□ 0.47
CHST3-201ENST00000373115 GOLGA8BA8MQT2 603 aa18.02■□□□□ 0.47
CHST3-201ENST00000373115 GLRX3O76003 335 aaKnown RBP18.01■□□□□ 0.47
CHST3-201ENST00000373115 SLFN5Q08AF3 891 aa18.01■□□□□ 0.47
CHST3-201ENST00000373115 HOMER2Q9NSB8 354 aa18.01■□□□□ 0.47
CHST3-201ENST00000373115 ZNF213O14771 459 aa18.01■□□□□ 0.47
CHST3-201ENST00000373115 RAB11FIP4Q86YS3 637 aa18.01■□□□□ 0.47
CHST3-201ENST00000373115 TAOK3Q9H2K8 898 aa18.01■□□□□ 0.47
CHST3-201ENST00000373115 NCOA2Q15596 1464 aa18.01■□□□□ 0.47
CHST3-201ENST00000373115 TCERG1LQ5VWI1 586 aa18.01■□□□□ 0.47
CHST3-201ENST00000373115 ZNF830Q96NB3 372 aaPredicted RBP18.01■□□□□ 0.47
CHST3-201ENST00000373115 MYCNP04198 464 aaPredicted RBP18.01■□□□□ 0.47
CHST3-201ENST00000373115 TMEM266Q2M3C6 531 aa18.01■□□□□ 0.47
CHST3-201ENST00000373115 NAA15Q9BXJ9 866 aaKnown RBP18■□□□□ 0.47
CHST3-201ENST00000373115 RTEL1-TNFRSF6BF6WH68 1400 aa18■□□□□ 0.47
CHST3-201ENST00000373115 GOLGA8AA7E2F4 631 aa18■□□□□ 0.47
CHST3-201ENST00000373115 CTAGE5O15320 804 aa18■□□□□ 0.47
CHST3-201ENST00000373115 PDIA4P13667 645 aaKnown RBP18■□□□□ 0.47
CHST3-201ENST00000373115 STX1AQ16623 288 aa18■□□□□ 0.47
CHST3-201ENST00000373115 NBPF8Q3BBV2 869 aa18■□□□□ 0.47
CHST3-201ENST00000373115 AFAP1Q8N556 730 aa18■□□□□ 0.47
CHST3-201ENST00000373115 ZNF692Q9BU19 519 aaPredicted RBP18■□□□□ 0.47
CHST3-201ENST00000373115 RNF216Q9NWF9 866 aaPredicted RBP18■□□□□ 0.47
CHST3-201ENST00000373115 AKAP2Q9Y2D5 859 aa18■□□□□ 0.47
CHST3-201ENST00000373115 SF3B2Q13435 895 aaKnown RBP18■□□□□ 0.47
CHST3-201ENST00000373115 GIGYF2Q6Y7W6 1299 aaKnown RBP18■□□□□ 0.47
CHST3-201ENST00000373115 CAVIN4Q5BKX8 364 aa18■□□□□ 0.47
CHST3-201ENST00000373115 FANCD2Q9BXW9 1451 aa18■□□□□ 0.47
CHST3-201ENST00000373115 NFE2L2Q16236 605 aa18■□□□□ 0.47
CHST3-201ENST00000373115 CTCFLQ8NI51 663 aaPredicted RBP18■□□□□ 0.47
CHST3-201ENST00000373115 SH2B1Q9NRF2 756 aaPredicted RBP18■□□□□ 0.47
CHST3-201ENST00000373115 MYO1BO43795 1136 aa17.99■□□□□ 0.47
CHST3-201ENST00000373115 DZIP1Q86YF9 867 aaKnown RBP17.99■□□□□ 0.47
CHST3-201ENST00000373115 ZNF444Q8N0Y2 327 aaPredicted RBP17.99■□□□□ 0.47
CHST3-201ENST00000373115 TBC1D2Q9BYX2 928 aa17.99■□□□□ 0.47
CHST3-201ENST00000373115 ANKIB1Q9P2G1 1089 aa17.99■□□□□ 0.47
CHST3-201ENST00000373115 PUF60Q9UHX1 559 aaKnown RBP17.99■□□□□ 0.47
CHST3-201ENST00000373115 IFIT3O14879 490 aaKnown RBP17.99■□□□□ 0.47
CHST3-201ENST00000373115 CCDC12Q8WUD4 166 aaPredicted RBP17.99■□□□□ 0.47
CHST3-201ENST00000373115 PHAXQ9H814 394 aaKnown RBP17.99■□□□□ 0.47
CHST3-201ENST00000373115 ZNF287Q9HBT7 754 aa17.99■□□□□ 0.47
CHST3-201ENST00000373115 F6X3S4 739 aa17.99■□□□□ 0.47
CHST3-201ENST00000373115 PRC1O43663 620 aa17.99■□□□□ 0.47
CHST3-201ENST00000373115 CCDC40Q4G0X9 1142 aa17.99■□□□□ 0.47
CHST3-201ENST00000373115 PAIP2Q9BPZ3 127 aaKnown RBP17.99■□□□□ 0.47
CHST3-201ENST00000373115 DNAI2Q9GZS0 605 aa17.99■□□□□ 0.47
CHST3-201ENST00000373115 PTCD1O75127 700 aaKnown RBP17.99■□□□□ 0.47
CHST3-201ENST00000373115 TMOD2Q9NZR1 351 aa17.98■□□□□ 0.47
CHST3-201ENST00000373115 LIMCH1Q9UPQ0 1083 aa17.98■□□□□ 0.47
CHST3-201ENST00000373115 CCDC196A0A1B0GTZ2 297 aa17.98■□□□□ 0.47
CHST3-201ENST00000373115 POTEB2H3BUK9 544 aa17.98■□□□□ 0.47
CHST3-201ENST00000373115 FSD2A1L4K1 749 aa17.98■□□□□ 0.47
CHST3-201ENST00000373115 HSF2BPO75031 334 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms