RNA–Protein interactions for RNA: ENST00000372899.5

UBR2-201, Transcript of ubiquitin protein ligase E3 component n-recognin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBR2, Length 7,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR2-201ENST00000372899 SCAPERQ9BY12 1400 aa16.62■□□□□ 0.25
UBR2-201ENST00000372899 B4DLN1 442 aa16.62■□□□□ 0.25
UBR2-201ENST00000372899 MRPL12P52815 198 aaKnown RBP16.62■□□□□ 0.25
UBR2-201ENST00000372899 SPTY2D1Q68D10 685 aaPredicted RBP16.62■□□□□ 0.25
UBR2-201ENST00000372899 AMPD3Q01432 767 aa16.62■□□□□ 0.25
UBR2-201ENST00000372899 RAD54L2Q9Y4B4 1467 aa16.62■□□□□ 0.25
UBR2-201ENST00000372899 RTEL1-TNFRSF6BF6WH68 1400 aa16.62■□□□□ 0.25
UBR2-201ENST00000372899 TMCO5BA8MYB1 307 aa16.62■□□□□ 0.25
UBR2-201ENST00000372899 USO1O60763 962 aaKnown RBP16.62■□□□□ 0.25
UBR2-201ENST00000372899 SSRP1Q08945 709 aaKnown RBP16.62■□□□□ 0.25
UBR2-201ENST00000372899 DDX46Q7L014 1031 aaKnown RBP16.62■□□□□ 0.25
UBR2-201ENST00000372899 CCDC7Q96M83 1385 aa16.62■□□□□ 0.25
UBR2-201ENST00000372899 KCNH5Q8NCM2 988 aa16.62■□□□□ 0.25
UBR2-201ENST00000372899 SHTN1A0MZ66 631 aa16.62■□□□□ 0.25
UBR2-201ENST00000372899 TMCO3Q6UWJ1 677 aa16.62■□□□□ 0.25
UBR2-201ENST00000372899 STX6O43752 255 aa16.61■□□□□ 0.25
UBR2-201ENST00000372899 ZSCAN31Q96LW9 406 aaPredicted RBP16.61■□□□□ 0.25
UBR2-201ENST00000372899 SLC12A7Q9Y666 1083 aa16.61■□□□□ 0.25
UBR2-201ENST00000372899 GNAT3A8MTJ3 354 aa16.61■□□□□ 0.25
UBR2-201ENST00000372899 TDRD12Q587J7 1177 aaKnown RBP16.61■□□□□ 0.25
UBR2-201ENST00000372899 WIZO95785 1651 aa16.61■□□□□ 0.25
UBR2-201ENST00000372899 PRPF31Q8WWY3 499 aaKnown RBP16.61■□□□□ 0.25
UBR2-201ENST00000372899 MYOM3Q5VTT5 1437 aa16.61■□□□□ 0.25
UBR2-201ENST00000372899 CCDC194A0A1B0GVG4 234 aa16.61■□□□□ 0.25
UBR2-201ENST00000372899 ALS2CR12Q96Q35 445 aa16.61■□□□□ 0.25
UBR2-201ENST00000372899 SNX16P57768 344 aa16.61■□□□□ 0.25
UBR2-201ENST00000372899 RNF41Q9H4P4 317 aaPredicted RBP16.61■□□□□ 0.25
UBR2-201ENST00000372899 TCERG1LQ5VWI1 586 aa16.6■□□□□ 0.25
UBR2-201ENST00000372899 GBP3Q9H0R5 595 aa16.6■□□□□ 0.25
UBR2-201ENST00000372899 KIF5CO60282 957 aa16.6■□□□□ 0.25
UBR2-201ENST00000372899 TRAK2O60296 914 aa16.6■□□□□ 0.25
UBR2-201ENST00000372899 CCDC175P0C221 793 aa16.6■□□□□ 0.25
UBR2-201ENST00000372899 CCDC82Q8N4S0 544 aa16.6■□□□□ 0.25
UBR2-201ENST00000372899 PHACTR2O75167 634 aa16.6■□□□□ 0.25
UBR2-201ENST00000372899 TTC12Q9H892 705 aaPredicted RBP16.6■□□□□ 0.25
UBR2-201ENST00000372899 TBC1D5Q92609 795 aa16.6■□□□□ 0.25
UBR2-201ENST00000372899 NUP62CLQ9H1M0 184 aa16.6■□□□□ 0.25
UBR2-201ENST00000372899 DNA2P51530 1060 aa16.6■□□□□ 0.25
UBR2-201ENST00000372899 DDX12PQ92771 950 aa16.6■□□□□ 0.25
UBR2-201ENST00000372899 C6orf163Q5TEZ5 329 aa16.59■□□□□ 0.25
UBR2-201ENST00000372899 PRPF4BQ13523 1007 aaKnown RBP16.59■□□□□ 0.25
UBR2-201ENST00000372899 SERPINA10Q9UK55 444 aa16.59■□□□□ 0.25
UBR2-201ENST00000372899 NUP88Q99567 741 aaPredicted RBP16.59■□□□□ 0.25
UBR2-201ENST00000372899 PRKCSHP14314 528 aaPredicted RBP16.59■□□□□ 0.25
UBR2-201ENST00000372899 KIF5BP33176 963 aa16.59■□□□□ 0.25
UBR2-201ENST00000372899 TRMT112Q9UI30 125 aaKnown RBP16.59■□□□□ 0.25
UBR2-201ENST00000372899 PPP6R1Q9UPN7 881 aa16.59■□□□□ 0.25
UBR2-201ENST00000372899 PDIA4P13667 645 aaKnown RBP16.59■□□□□ 0.25
UBR2-201ENST00000372899 LMOD1P29536 600 aaPredicted RBP16.59■□□□□ 0.25
UBR2-201ENST00000372899 OGFOD1Q8N543 542 aa16.59■□□□□ 0.25
UBR2-201ENST00000372899 PRKRIP1Q9H875 184 aaPredicted RBP16.59■□□□□ 0.25
UBR2-201ENST00000372899 CASTP20810 708 aaKnown RBP16.58■□□□□ 0.25
UBR2-201ENST00000372899 POLD1P28340 1107 aa16.58■□□□□ 0.25
UBR2-201ENST00000372899 PAFAH1B1P43034 410 aa16.58■□□□□ 0.25
UBR2-201ENST00000372899 VAT1LQ9HCJ6 419 aa16.58■□□□□ 0.25
UBR2-201ENST00000372899 USP37Q86T82 979 aa16.58■□□□□ 0.24
UBR2-201ENST00000372899 TCP11L1Q9NUJ3 509 aa16.58■□□□□ 0.24
UBR2-201ENST00000372899 PDE4BQ07343 736 aa16.58■□□□□ 0.24
UBR2-201ENST00000372899 CEP135Q66GS9 1140 aa16.58■□□□□ 0.24
UBR2-201ENST00000372899 FANCD2Q9BXW9 1451 aa16.57■□□□□ 0.24
UBR2-201ENST00000372899 BCAR3O75815 825 aa16.57■□□□□ 0.24
UBR2-201ENST00000372899 SPECC1Q5M775 1068 aa16.57■□□□□ 0.24
UBR2-201ENST00000372899 DDX11Q96FC9 970 aa16.57■□□□□ 0.24
UBR2-201ENST00000372899 CDC5LQ99459 802 aaKnown RBP16.57■□□□□ 0.24
UBR2-201ENST00000372899 NAA15Q9BXJ9 866 aaKnown RBP16.57■□□□□ 0.24
UBR2-201ENST00000372899 ECM2O94769 699 aaPredicted RBP16.57■□□□□ 0.24
UBR2-201ENST00000372899 EXOC5O00471 708 aa16.57■□□□□ 0.24
UBR2-201ENST00000372899 ZNF213O14771 459 aa16.57■□□□□ 0.24
UBR2-201ENST00000372899 LDHCP07864 332 aa16.57■□□□□ 0.24
UBR2-201ENST00000372899 CCDC172P0C7W6 258 aa16.57■□□□□ 0.24
UBR2-201ENST00000372899 GSTO1P78417 241 aa16.57■□□□□ 0.24
UBR2-201ENST00000372899 EXOSC9Q06265 439 aaKnown RBP16.57■□□□□ 0.24
UBR2-201ENST00000372899 MMRN2Q9H8L6 949 aa16.57■□□□□ 0.24
UBR2-201ENST00000372899 DMRT2Q9Y5R5 561 aa16.56■□□□□ 0.24
UBR2-201ENST00000372899 APBB1IPQ7Z5R6 666 aaPredicted RBP16.56■□□□□ 0.24
UBR2-201ENST00000372899 KAT14Q9H8E8 782 aa16.56■□□□□ 0.24
UBR2-201ENST00000372899 CCDC40Q4G0X9 1142 aa16.56■□□□□ 0.24
UBR2-201ENST00000372899 KMT5BQ4FZB7 885 aa16.56■□□□□ 0.24
UBR2-201ENST00000372899 MTIF2P46199 727 aaKnown RBP16.56■□□□□ 0.24
UBR2-201ENST00000372899 LRPPRCP42704 1394 aaKnown RBP16.56■□□□□ 0.24
UBR2-201ENST00000372899 PSMC4P43686 418 aa16.55■□□□□ 0.24
UBR2-201ENST00000372899 BBXQ8WY36 941 aaPredicted RBP16.55■□□□□ 0.24
UBR2-201ENST00000372899 MYD88Q99836 296 aa16.55■□□□□ 0.24
UBR2-201ENST00000372899 ZBTB24O43167 697 aaPredicted RBP16.55■□□□□ 0.24
UBR2-201ENST00000372899 GAS8O95995 478 aa16.55■□□□□ 0.24
UBR2-201ENST00000372899 FAM114A1Q8IWE2 563 aa16.55■□□□□ 0.24
UBR2-201ENST00000372899 NOC2LQ9Y3T9 749 aaKnown RBP16.55■□□□□ 0.24
UBR2-201ENST00000372899 A0A1W2PRG0 241 aa16.55■□□□□ 0.24
UBR2-201ENST00000372899 TCP11L2Q8N4U5 519 aa16.55■□□□□ 0.24
UBR2-201ENST00000372899 CADPSQ9ULU8 1353 aa16.55■□□□□ 0.24
UBR2-201ENST00000372899 TBCAO75347 108 aaKnown RBP16.55■□□□□ 0.24
UBR2-201ENST00000372899 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.55■□□□□ 0.24
UBR2-201ENST00000372899 V9GYY5 206 aaPredicted RBP16.55■□□□□ 0.24
UBR2-201ENST00000372899 CCDC14Q49A88 953 aa16.54■□□□□ 0.24
UBR2-201ENST00000372899 PLVAPQ9BX97 442 aa16.54■□□□□ 0.24
UBR2-201ENST00000372899 HLTFQ14527 1009 aaKnown RBP eCLIP16.54■□□□□ 0.24
UBR2-201ENST00000372899 LRRC27Q9C0I9 530 aa16.54■□□□□ 0.24
UBR2-201ENST00000372899 ZSCAN12O43309 604 aa16.54■□□□□ 0.24
UBR2-201ENST00000372899 PPP4R3BQ5MIZ7 849 aa16.54■□□□□ 0.24
UBR2-201ENST00000372899 SLC4A8Q2Y0W8 1093 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms