RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 PHF14O94880 888 aa17.88■□□□□ 0.45
COL9A2-202ENST00000372748 CNPY2Q9Y2B0 182 aa17.88■□□□□ 0.45
COL9A2-202ENST00000372748 ADCY5O95622 1261 aa17.88■□□□□ 0.45
COL9A2-202ENST00000372748 GNAI2P04899 355 aa17.88■□□□□ 0.45
COL9A2-202ENST00000372748 NOLC1Q14978 699 aaKnown RBP eCLIP17.88■□□□□ 0.45
COL9A2-202ENST00000372748 MYRIPQ8NFW9 859 aa17.88■□□□□ 0.45
COL9A2-202ENST00000372748 SRCIN1Q9C0H9 1055 aa17.88■□□□□ 0.45
COL9A2-202ENST00000372748 ARHGEF10O15013 1369 aa17.88■□□□□ 0.45
COL9A2-202ENST00000372748 FLT4P35916 1363 aa17.88■□□□□ 0.45
COL9A2-202ENST00000372748 FKBP5Q13451 457 aaPredicted RBP17.87■□□□□ 0.45
COL9A2-202ENST00000372748 STK31Q9BXU1 1019 aa17.87■□□□□ 0.45
COL9A2-202ENST00000372748 SSH2Q76I76 1423 aa17.87■□□□□ 0.45
COL9A2-202ENST00000372748 TOPAZ1Q8N9V7 1692 aa17.87■□□□□ 0.45
COL9A2-202ENST00000372748 RGPD1P0DJD0 1748 aa17.87■□□□□ 0.45
COL9A2-202ENST00000372748 CEP170BQ9Y4F5 1589 aaPredicted RBP17.86■□□□□ 0.45
COL9A2-202ENST00000372748 SBNO1A3KN83 1393 aa17.86■□□□□ 0.45
COL9A2-202ENST00000372748 SALL3Q9BXA9 1300 aa17.86■□□□□ 0.45
COL9A2-202ENST00000372748 MAP4K4O95819 1239 aaPredicted RBP17.86■□□□□ 0.45
COL9A2-202ENST00000372748 CCT4P50991 539 aaKnown RBP17.86■□□□□ 0.45
COL9A2-202ENST00000372748 TTC21AQ8NDW8 1320 aa17.86■□□□□ 0.45
COL9A2-202ENST00000372748 WDR33Q9C0J8 1336 aaKnown RBP17.86■□□□□ 0.45
COL9A2-202ENST00000372748 PIBF1Q8WXW3 757 aa17.86■□□□□ 0.45
COL9A2-202ENST00000372748 ANAPC15P60006 121 aa17.85■□□□□ 0.45
COL9A2-202ENST00000372748 IL1RAPL2Q9NP60 686 aa17.85■□□□□ 0.45
COL9A2-202ENST00000372748 C14orf37Q86TY3 774 aa17.85■□□□□ 0.45
COL9A2-202ENST00000372748 FLIIQ13045 1269 aa17.85■□□□□ 0.45
COL9A2-202ENST00000372748 ZNF710Q8N1W2 664 aa17.85■□□□□ 0.45
COL9A2-202ENST00000372748 RGPD8O14715 1765 aaPredicted RBP17.85■□□□□ 0.45
COL9A2-202ENST00000372748 NALCNQ8IZF0 1738 aa17.84■□□□□ 0.45
COL9A2-202ENST00000372748 IGSF1Q8N6C5 1336 aa17.84■□□□□ 0.45
COL9A2-202ENST00000372748 USHBP1Q8N6Y0 703 aa17.84■□□□□ 0.45
COL9A2-202ENST00000372748 CCDC94Q9BW85 323 aaPredicted RBP17.84■□□□□ 0.45
COL9A2-202ENST00000372748 ZHX1Q9UKY1 873 aaPredicted RBP17.84■□□□□ 0.45
COL9A2-202ENST00000372748 FIBPO43427 364 aa17.84■□□□□ 0.45
COL9A2-202ENST00000372748 SMAP1Q8IYB5 467 aaPredicted RBP17.84■□□□□ 0.45
COL9A2-202ENST00000372748 FAM184AQ8NB25 1140 aa17.83■□□□□ 0.45
COL9A2-202ENST00000372748 GNAT3A8MTJ3 354 aa17.83■□□□□ 0.44
COL9A2-202ENST00000372748 CCDC183Q5T5S1 534 aa17.83■□□□□ 0.44
COL9A2-202ENST00000372748 NUTM1Q86Y26 1132 aa17.83■□□□□ 0.44
COL9A2-202ENST00000372748 KDRP35968 1356 aa17.82■□□□□ 0.44
COL9A2-202ENST00000372748 IL17REQ8NFR9 667 aa17.82■□□□□ 0.44
COL9A2-202ENST00000372748 RPAP1Q9BWH6 1393 aaPredicted RBP17.82■□□□□ 0.44
COL9A2-202ENST00000372748 GIMAP6Q6P9H5 292 aa17.81■□□□□ 0.44
COL9A2-202ENST00000372748 HOXC9P31274 260 aa17.81■□□□□ 0.44
COL9A2-202ENST00000372748 UVSSAQ2YD98 709 aa17.81■□□□□ 0.44
COL9A2-202ENST00000372748 CCDC30Q5VVM6 783 aa17.81■□□□□ 0.44
COL9A2-202ENST00000372748 ABTB2Q8N961 1025 aa17.81■□□□□ 0.44
COL9A2-202ENST00000372748 LRRFIP2Q9Y608 721 aaKnown RBP17.81■□□□□ 0.44
COL9A2-202ENST00000372748 TCHHQ07283 1943 aa17.81■□□□□ 0.44
COL9A2-202ENST00000372748 CBX1P83916 185 aa17.81■□□□□ 0.44
COL9A2-202ENST00000372748 PRIMPOLQ96LW4 560 aa17.81■□□□□ 0.44
COL9A2-202ENST00000372748 CPA1P15085 419 aa17.8■□□□□ 0.44
COL9A2-202ENST00000372748 RBM33Q96EV2 1170 aaKnown RBP17.8■□□□□ 0.44
COL9A2-202ENST00000372748 TBX22Q9Y458 520 aa17.8■□□□□ 0.44
COL9A2-202ENST00000372748 FMN2Q9NZ56 1722 aa17.8■□□□□ 0.44
COL9A2-202ENST00000372748 PLEKHG5O94827 1062 aa17.8■□□□□ 0.44
COL9A2-202ENST00000372748 HSPA4P34932 840 aa17.8■□□□□ 0.44
COL9A2-202ENST00000372748 ZSCAN22P10073 491 aaPredicted RBP17.79■□□□□ 0.44
COL9A2-202ENST00000372748 SYT1P21579 422 aa17.79■□□□□ 0.44
COL9A2-202ENST00000372748 ATP8B2P98198 1209 aa17.79■□□□□ 0.44
COL9A2-202ENST00000372748 HMGN5P82970 282 aaKnown RBP17.79■□□□□ 0.44
COL9A2-202ENST00000372748 KDM4AO75164 1064 aa17.78■□□□□ 0.44
COL9A2-202ENST00000372748 KCNA6P17658 529 aa17.78■□□□□ 0.44
COL9A2-202ENST00000372748 SPC24Q8NBT2 197 aa17.78■□□□□ 0.44
COL9A2-202ENST00000372748 PHAXQ9H814 394 aaKnown RBP17.78■□□□□ 0.44
COL9A2-202ENST00000372748 AP5Z1O43299 807 aa17.78■□□□□ 0.44
COL9A2-202ENST00000372748 STX6O43752 255 aa17.78■□□□□ 0.44
COL9A2-202ENST00000372748 AK2P54819 239 aa17.78■□□□□ 0.44
COL9A2-202ENST00000372748 RASEFQ8IZ41 740 aa17.78■□□□□ 0.44
COL9A2-202ENST00000372748 KIF3AQ9Y496 699 aa17.78■□□□□ 0.44
COL9A2-202ENST00000372748 GNAI3P08754 354 aa17.77■□□□□ 0.44
COL9A2-202ENST00000372748 UBE2HP62256 183 aa17.77■□□□□ 0.44
COL9A2-202ENST00000372748 DIP2AQ14689 1571 aa17.77■□□□□ 0.44
COL9A2-202ENST00000372748 EIF2S2P20042 333 aaKnown RBP17.77■□□□□ 0.44
COL9A2-202ENST00000372748 PPP4R3BQ5MIZ7 849 aa17.77■□□□□ 0.44
COL9A2-202ENST00000372748 TMEM87AQ8NBN3 555 aa17.77■□□□□ 0.44
COL9A2-202ENST00000372748 STAP2Q9UGK3 403 aa17.77■□□□□ 0.44
COL9A2-202ENST00000372748 TAF7Q15545 349 aaPredicted RBP17.77■□□□□ 0.43
COL9A2-202ENST00000372748 SNX14Q9Y5W7 946 aa17.77■□□□□ 0.43
COL9A2-202ENST00000372748 PIK3C2AO00443 1686 aa17.76■□□□□ 0.43
COL9A2-202ENST00000372748 RUFY3Q7L099 469 aa17.76■□□□□ 0.43
COL9A2-202ENST00000372748 PYCARDQ9ULZ3 195 aa17.76■□□□□ 0.43
COL9A2-202ENST00000372748 ZSCAN20P17040 1043 aaPredicted RBP17.76■□□□□ 0.43
COL9A2-202ENST00000372748 ATP2B3Q16720 1220 aa17.76■□□□□ 0.43
COL9A2-202ENST00000372748 SPG7Q9UQ90 795 aa17.76■□□□□ 0.43
COL9A2-202ENST00000372748 LARGE1O95461 756 aa17.75■□□□□ 0.43
COL9A2-202ENST00000372748 F13A1P00488 732 aa17.75■□□□□ 0.43
COL9A2-202ENST00000372748 DNM1Q05193 864 aaKnown RBP17.75■□□□□ 0.43
COL9A2-202ENST00000372748 HDGFL1Q5TGJ6 251 aa17.75■□□□□ 0.43
COL9A2-202ENST00000372748 USP44Q9H0E7 712 aa17.75■□□□□ 0.43
COL9A2-202ENST00000372748 BCL2L12Q9HB09 334 aa17.75■□□□□ 0.43
COL9A2-202ENST00000372748 SMC3Q9UQE7 1217 aa17.75■□□□□ 0.43
COL9A2-202ENST00000372748 HTATSF1O43719 755 aaKnown RBP17.75■□□□□ 0.43
COL9A2-202ENST00000372748 GTF2F1P35269 517 aaKnown RBP eCLIP17.75■□□□□ 0.43
COL9A2-202ENST00000372748 KCNF1Q9H3M0 494 aa17.75■□□□□ 0.43
COL9A2-202ENST00000372748 SPTLC3Q9NUV7 552 aa17.75■□□□□ 0.43
COL9A2-202ENST00000372748 CHMP3Q9Y3E7 222 aa17.75■□□□□ 0.43
COL9A2-202ENST00000372748 SETD1BQ9UPS6 1966 aaKnown RBP17.75■□□□□ 0.43
COL9A2-202ENST00000372748 CWC27Q6UX04 472 aaKnown RBP17.74■□□□□ 0.43
COL9A2-202ENST00000372748 MAP3K5Q99683 1374 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms