RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 ZBTB47Q9UFB7 747 aaPredicted RBP23.43■■□□□ 1.34
VEGFA-206ENST00000372077 ASAP1Q9ULH1 1129 aa23.43■■□□□ 1.34
VEGFA-206ENST00000372077 DZIP1LQ8IYY4 767 aaKnown RBP23.42■■□□□ 1.34
VEGFA-206ENST00000372077 PANK1Q8TE04 598 aa23.42■■□□□ 1.34
VEGFA-206ENST00000372077 ACSBG1Q96GR2 724 aa23.42■■□□□ 1.34
VEGFA-206ENST00000372077 RLBP1P12271 317 aa23.42■■□□□ 1.34
VEGFA-206ENST00000372077 SYTL4Q96C24 671 aaPredicted RBP23.42■■□□□ 1.34
VEGFA-206ENST00000372077 PTPRCP08575 1304 aa23.41■■□□□ 1.34
VEGFA-206ENST00000372077 G2E3Q7L622 706 aa23.4■■□□□ 1.34
VEGFA-206ENST00000372077 API5Q9BZZ5 524 aaKnown RBP23.4■■□□□ 1.34
VEGFA-206ENST00000372077 SLC4A3P48751 1232 aa23.4■■□□□ 1.34
VEGFA-206ENST00000372077 CLUAP1Q96AJ1 413 aa23.4■■□□□ 1.34
VEGFA-206ENST00000372077 USP16Q9Y5T5 823 aa23.4■■□□□ 1.34
VEGFA-206ENST00000372077 IPO9Q96P70 1041 aaKnown RBP23.39■■□□□ 1.34
VEGFA-206ENST00000372077 CHPF2Q9P2E5 772 aa23.39■■□□□ 1.34
VEGFA-206ENST00000372077 LAMB4A4D0S4 1761 aa23.39■■□□□ 1.33
VEGFA-206ENST00000372077 VSIG10Q8N0Z9 540 aa23.39■■□□□ 1.33
VEGFA-206ENST00000372077 DBF4Q9UBU7 674 aaPredicted RBP23.39■■□□□ 1.33
VEGFA-206ENST00000372077 KAT6BQ8WYB5 2073 aa23.38■■□□□ 1.33
VEGFA-206ENST00000372077 PTCD1O75127 700 aaKnown RBP23.38■■□□□ 1.33
VEGFA-206ENST00000372077 RGS17Q9UGC6 210 aaPredicted RBP23.38■■□□□ 1.33
VEGFA-206ENST00000372077 PDE4AP27815 886 aa23.38■■□□□ 1.33
VEGFA-206ENST00000372077 FTSJ3Q8IY81 847 aaKnown RBP23.38■■□□□ 1.33
VEGFA-206ENST00000372077 RGS12O14924 1447 aa23.38■■□□□ 1.33
VEGFA-206ENST00000372077 KCNQ2O43526 872 aa23.37■■□□□ 1.33
VEGFA-206ENST00000372077 COG6Q9Y2V7 657 aa23.37■■□□□ 1.33
VEGFA-206ENST00000372077 FLIIQ13045 1269 aa23.37■■□□□ 1.33
VEGFA-206ENST00000372077 PDIA6Q15084 440 aa23.37■■□□□ 1.33
VEGFA-206ENST00000372077 ABCC4O15439 1325 aa23.37■■□□□ 1.33
VEGFA-206ENST00000372077 DDX21Q9NR30 783 aaKnown RBP eCLIP23.36■■□□□ 1.33
VEGFA-206ENST00000372077 BRWD3Q6RI45 1802 aa23.35■■□□□ 1.33
VEGFA-206ENST00000372077 NHSQ6T4R5 1651 aa23.35■■□□□ 1.33
VEGFA-206ENST00000372077 MVPQ14764 893 aaKnown RBP23.35■■□□□ 1.33
VEGFA-206ENST00000372077 TMEM57Q8N5G2 664 aa23.34■■□□□ 1.33
VEGFA-206ENST00000372077 PHAXQ9H814 394 aaKnown RBP23.34■■□□□ 1.33
VEGFA-206ENST00000372077 FAM182BQ5T319 152 aa23.34■■□□□ 1.33
VEGFA-206ENST00000372077 TEX13AQ9BXU3 409 aaPredicted RBP23.34■■□□□ 1.33
VEGFA-206ENST00000372077 ERBB4Q15303 1308 aa23.33■■□□□ 1.33
VEGFA-206ENST00000372077 RXRBP28702 533 aa23.33■■□□□ 1.33
VEGFA-206ENST00000372077 PROSER3Q2NL68 480 aa23.33■■□□□ 1.33
VEGFA-206ENST00000372077 HYPKQ9NX55 129 aa23.33■■□□□ 1.33
VEGFA-206ENST00000372077 KRT27Q7Z3Y8 459 aa23.33■■□□□ 1.33
VEGFA-206ENST00000372077 SLC4A9Q96Q91 983 aa23.33■■□□□ 1.33
VEGFA-206ENST00000372077 RBM42Q9BTD8 480 aaKnown RBP23.33■■□□□ 1.33
VEGFA-206ENST00000372077 RGS3P49796 1198 aa23.32■■□□□ 1.32
VEGFA-206ENST00000372077 SBF2Q86WG5 1849 aa23.32■■□□□ 1.32
VEGFA-206ENST00000372077 ANXA1P04083 346 aa23.32■■□□□ 1.32
VEGFA-206ENST00000372077 SMARCC1Q92922 1105 aaPredicted RBP23.32■■□□□ 1.32
VEGFA-206ENST00000372077 ANO8Q9HCE9 1232 aaPredicted RBP23.32■■□□□ 1.32
VEGFA-206ENST00000372077 LRP10Q7Z4F1 713 aa23.31■■□□□ 1.32
VEGFA-206ENST00000372077 FKBP5Q13451 457 aaPredicted RBP23.3■■□□□ 1.32
VEGFA-206ENST00000372077 INTS3Q68E01 1043 aaKnown RBP23.3■■□□□ 1.32
VEGFA-206ENST00000372077 POTEAQ6S8J7 498 aa23.3■■□□□ 1.32
VEGFA-206ENST00000372077 DNAJC10Q8IXB1 793 aa23.3■■□□□ 1.32
VEGFA-206ENST00000372077 AAMPQ13685 434 aa23.29■■□□□ 1.32
VEGFA-206ENST00000372077 PTF1AQ7RTS3 328 aa23.29■■□□□ 1.32
VEGFA-206ENST00000372077 DDX19BQ9UMR2 479 aa23.29■■□□□ 1.32
VEGFA-206ENST00000372077 PALLDQ8WX93 1383 aa23.29■■□□□ 1.32
VEGFA-206ENST00000372077 CICQ96RK0 1608 aaPredicted RBP23.29■■□□□ 1.32
VEGFA-206ENST00000372077 TJP1Q07157 1748 aa23.28■■□□□ 1.32
VEGFA-206ENST00000372077 FAM196AQ6ZSG2 479 aa23.28■■□□□ 1.32
VEGFA-206ENST00000372077 ITPRIPQ8IWB1 547 aa23.28■■□□□ 1.32
VEGFA-206ENST00000372077 BTAF1O14981 1849 aa23.28■■□□□ 1.32
VEGFA-206ENST00000372077 NBPF26B4DH59 902 aa23.28■■□□□ 1.32
VEGFA-206ENST00000372077 NBPF14Q5TI25 921 aa23.28■■□□□ 1.32
VEGFA-206ENST00000372077 NBPF10Q6P3W6 841 aaKnown RBP23.28■■□□□ 1.32
VEGFA-206ENST00000372077 NBPF15Q8N660 670 aa23.28■■□□□ 1.32
VEGFA-206ENST00000372077 F6X3S4 739 aa23.27■■□□□ 1.32
VEGFA-206ENST00000372077 ZNF831Q5JPB2 1677 aa23.27■■□□□ 1.31
VEGFA-206ENST00000372077 LOC102724428A0A0B4J2F2 783 aa23.26■■□□□ 1.31
VEGFA-206ENST00000372077 STARD3NLO95772 234 aa23.26■■□□□ 1.31
VEGFA-206ENST00000372077 A1BGP04217 495 aa23.26■■□□□ 1.31
VEGFA-206ENST00000372077 MYL6BP14649 208 aa23.26■■□□□ 1.31
VEGFA-206ENST00000372077 SIK1P57059 783 aa23.26■■□□□ 1.31
VEGFA-206ENST00000372077 CYP19A1P11511 503 aaPredicted RBP23.25■■□□□ 1.31
VEGFA-206ENST00000372077 PXDNLA1KZ92 1463 aa23.25■■□□□ 1.31
VEGFA-206ENST00000372077 BCL11BQ9C0K0 894 aaPredicted RBP23.25■■□□□ 1.31
VEGFA-206ENST00000372077 ADCY9O60503 1353 aa23.24■■□□□ 1.31
VEGFA-206ENST00000372077 PIP4K2AP48426 406 aaPredicted RBP23.24■■□□□ 1.31
VEGFA-206ENST00000372077 ZBTB7BO15156 539 aaPredicted RBP23.23■■□□□ 1.31
VEGFA-206ENST00000372077 CCT4P50991 539 aaKnown RBP23.23■■□□□ 1.31
VEGFA-206ENST00000372077 PI4KAP2A4QPH2 592 aa23.23■■□□□ 1.31
VEGFA-206ENST00000372077 RTL5Q5HYW3 569 aaPredicted RBP23.23■■□□□ 1.31
VEGFA-206ENST00000372077 KSR2Q6VAB6 950 aa23.23■■□□□ 1.31
VEGFA-206ENST00000372077 PI4KAP1Q8N8J0 262 aa23.23■■□□□ 1.31
VEGFA-206ENST00000372077 XAGE3Q8WTP9 111 aa23.23■■□□□ 1.31
VEGFA-206ENST00000372077 N4BP2Q86UW6 1770 aaPredicted RBP23.23■■□□□ 1.31
VEGFA-206ENST00000372077 ATP6V1AP38606 617 aa23.23■■□□□ 1.31
VEGFA-206ENST00000372077 COPS6Q7L5N1 327 aa23.23■■□□□ 1.31
VEGFA-206ENST00000372077 CHMP4BQ9H444 224 aaKnown RBP23.22■■□□□ 1.31
VEGFA-206ENST00000372077 DDX58O95786 925 aaKnown RBP23.22■■□□□ 1.31
VEGFA-206ENST00000372077 DNAAF4Q8WXU2 420 aa23.22■■□□□ 1.31
VEGFA-206ENST00000372077 BACH2Q9BYV9 841 aa23.22■■□□□ 1.31
VEGFA-206ENST00000372077 ZBTB40Q9NUA8 1239 aa23.22■■□□□ 1.31
VEGFA-206ENST00000372077 SLC4A10Q6U841 1118 aa23.21■■□□□ 1.31
VEGFA-206ENST00000372077 AIMP1Q12904 312 aaKnown RBP23.21■■□□□ 1.31
VEGFA-206ENST00000372077 ITPK1Q13572 414 aa23.21■■□□□ 1.31
VEGFA-206ENST00000372077 ATP10DQ9P241 1426 aa23.19■■□□□ 1.3
VEGFA-206ENST00000372077 MAP3K2Q9Y2U5 619 aa23.19■■□□□ 1.3
VEGFA-206ENST00000372077 LY75O60449 1722 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 528.9 ms