RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 HYPKQ9NX55 129 aa16.92■□□□□ 0.3
SHC1-202ENST00000368445 USP16Q9Y5T5 823 aa16.92■□□□□ 0.3
SHC1-202ENST00000368445 ATP5J2-PTCD1G3V325 749 aa16.91■□□□□ 0.3
SHC1-202ENST00000368445 RBM25P49756 843 aaKnown RBP16.91■□□□□ 0.3
SHC1-202ENST00000368445 BEND3Q5T5X7 828 aa16.91■□□□□ 0.3
SHC1-202ENST00000368445 SLC52A2Q9HAB3 445 aa16.91■□□□□ 0.3
SHC1-202ENST00000368445 RHPN1Q8TCX5 695 aa16.91■□□□□ 0.3
SHC1-202ENST00000368445 CEMIPQ8WUJ3 1361 aa16.91■□□□□ 0.3
SHC1-202ENST00000368445 IFIT2P09913 472 aaKnown RBP16.9■□□□□ 0.3
SHC1-202ENST00000368445 FOXD4L5Q5VV16 416 aaPredicted RBP16.9■□□□□ 0.3
SHC1-202ENST00000368445 CLASRPQ8N2M8 674 aaKnown RBP16.9■□□□□ 0.3
SHC1-202ENST00000368445 FOXD4L4Q8WXT5 416 aaPredicted RBP16.9■□□□□ 0.3
SHC1-202ENST00000368445 SYTL4Q96C24 671 aaPredicted RBP16.9■□□□□ 0.3
SHC1-202ENST00000368445 EIF5BO60841 1220 aaKnown RBP16.9■□□□□ 0.3
SHC1-202ENST00000368445 CD2BP2O95400 341 aaKnown RBP16.9■□□□□ 0.3
SHC1-202ENST00000368445 HOXB7P09629 217 aa16.9■□□□□ 0.3
SHC1-202ENST00000368445 G3BP1Q13283 466 aaKnown RBP eCLIP16.9■□□□□ 0.3
SHC1-202ENST00000368445 SOS1Q07889 1333 aaPredicted RBP16.89■□□□□ 0.3
SHC1-202ENST00000368445 KIF1BPQ96EK5 621 aa16.89■□□□□ 0.29
SHC1-202ENST00000368445 CYP27B1O15528 508 aa16.89■□□□□ 0.29
SHC1-202ENST00000368445 MCCP23508 829 aa16.89■□□□□ 0.29
SHC1-202ENST00000368445 DDX21Q9NR30 783 aaKnown RBP eCLIP16.89■□□□□ 0.29
SHC1-202ENST00000368445 K7ELQ4 463 aaPredicted RBP16.88■□□□□ 0.29
SHC1-202ENST00000368445 ST18O60284 1047 aa16.88■□□□□ 0.29
SHC1-202ENST00000368445 NEK4P51957 841 aa16.88■□□□□ 0.29
SHC1-202ENST00000368445 KLHDC4Q8TBB5 520 aa16.88■□□□□ 0.29
SHC1-202ENST00000368445 ZCRB1Q8TBF4 217 aaKnown RBP16.88■□□□□ 0.29
SHC1-202ENST00000368445 FMNL2Q96PY5 1086 aa16.88■□□□□ 0.29
SHC1-202ENST00000368445 SPATA31A3Q5VYP0 1347 aa16.88■□□□□ 0.29
SHC1-202ENST00000368445 PXDNQ92626 1479 aa16.88■□□□□ 0.29
SHC1-202ENST00000368445 SNRPA1P09661 255 aaKnown RBP16.87■□□□□ 0.29
SHC1-202ENST00000368445 KIAA1211Q6ZU35 1233 aa16.87■□□□□ 0.29
SHC1-202ENST00000368445 DCAF5Q96JK2 942 aa16.87■□□□□ 0.29
SHC1-202ENST00000368445 USP26Q9BXU7 913 aa16.87■□□□□ 0.29
SHC1-202ENST00000368445 HDAC5Q9UQL6 1122 aa16.87■□□□□ 0.29
SHC1-202ENST00000368445 TPRNQ4KMQ1 711 aa16.87■□□□□ 0.29
SHC1-202ENST00000368445 HSP90AB4PQ58FF6 505 aa16.87■□□□□ 0.29
SHC1-202ENST00000368445 LARP1Q6PKG0 1096 aaKnown RBP16.87■□□□□ 0.29
SHC1-202ENST00000368445 ANKRD13DQ6ZTN6 518 aa16.87■□□□□ 0.29
SHC1-202ENST00000368445 ADAMTSL3P82987 1691 aa16.87■□□□□ 0.29
SHC1-202ENST00000368445 GRM8O00222 908 aa16.86■□□□□ 0.29
SHC1-202ENST00000368445 KCNJ4P48050 445 aa16.86■□□□□ 0.29
SHC1-202ENST00000368445 AACSQ86V21 672 aa16.86■□□□□ 0.29
SHC1-202ENST00000368445 UNC5CLQ8IV45 518 aa16.86■□□□□ 0.29
SHC1-202ENST00000368445 SSH3Q8TE77 659 aa16.86■□□□□ 0.29
SHC1-202ENST00000368445 CCDC8Q9H0W5 538 aaPredicted RBP16.86■□□□□ 0.29
SHC1-202ENST00000368445 RABEP1Q15276 862 aa16.86■□□□□ 0.29
SHC1-202ENST00000368445 CWC27Q6UX04 472 aaKnown RBP16.86■□□□□ 0.29
SHC1-202ENST00000368445 RTN4Q9NQC3 1192 aaKnown RBP16.86■□□□□ 0.29
SHC1-202ENST00000368445 NCLP19338 710 aaKnown RBP16.85■□□□□ 0.29
SHC1-202ENST00000368445 LINS1Q8NG48 757 aa16.85■□□□□ 0.29
SHC1-202ENST00000368445 UBE3BQ7Z3V4 1068 aa16.85■□□□□ 0.29
SHC1-202ENST00000368445 RGPD1P0DJD0 1748 aa16.85■□□□□ 0.29
SHC1-202ENST00000368445 RAB11FIP3O75154 756 aa16.84■□□□□ 0.29
SHC1-202ENST00000368445 UPF3BQ9BZI7 483 aaKnown RBP16.84■□□□□ 0.29
SHC1-202ENST00000368445 BICC1Q9H694 974 aaKnown RBP16.84■□□□□ 0.29
SHC1-202ENST00000368445 ANTXR1Q9H6X2 564 aa16.84■□□□□ 0.29
SHC1-202ENST00000368445 MST1RQ04912 1400 aa16.84■□□□□ 0.29
SHC1-202ENST00000368445 NWD1Q149M9 1564 aa16.84■□□□□ 0.29
SHC1-202ENST00000368445 NFAT5O94916 1531 aa16.84■□□□□ 0.29
SHC1-202ENST00000368445 DIAPH3Q9NSV4 1193 aa16.84■□□□□ 0.29
SHC1-202ENST00000368445 ZBTB3Q9H5J0 574 aa16.84■□□□□ 0.29
SHC1-202ENST00000368445 LTN1O94822 1766 aa16.84■□□□□ 0.29
SHC1-202ENST00000368445 IBTKQ9P2D0 1353 aaPredicted RBP16.83■□□□□ 0.29
SHC1-202ENST00000368445 GPATCH3Q96I76 525 aa16.83■□□□□ 0.29
SHC1-202ENST00000368445 SUCLG2Q96I99 432 aa16.83■□□□□ 0.29
SHC1-202ENST00000368445 MCM4P33991 863 aa16.83■□□□□ 0.28
SHC1-202ENST00000368445 FOXD4L6Q3SYB3 417 aaPredicted RBP16.83■□□□□ 0.28
SHC1-202ENST00000368445 FOXD4L3Q6VB84 417 aaPredicted RBP16.83■□□□□ 0.28
SHC1-202ENST00000368445 KIF2CQ99661 725 aa16.83■□□□□ 0.28
SHC1-202ENST00000368445 ADCY9O60503 1353 aa16.83■□□□□ 0.28
SHC1-202ENST00000368445 A0A087WZG4 1122 aa16.82■□□□□ 0.28
SHC1-202ENST00000368445 ALDH1L1O75891 902 aa16.82■□□□□ 0.28
SHC1-202ENST00000368445 CNTROBQ8N137 903 aa16.82■□□□□ 0.28
SHC1-202ENST00000368445 ESYT1Q9BSJ8 1104 aa16.82■□□□□ 0.28
SHC1-202ENST00000368445 A1BGP04217 495 aa16.82■□□□□ 0.28
SHC1-202ENST00000368445 SNX21Q969T3 373 aa16.82■□□□□ 0.28
SHC1-202ENST00000368445 CCDC85AQ96PX6 553 aaPredicted RBP16.82■□□□□ 0.28
SHC1-202ENST00000368445 CHMLP26374 656 aa16.81■□□□□ 0.28
SHC1-202ENST00000368445 IL2RBP14784 551 aa16.81■□□□□ 0.28
SHC1-202ENST00000368445 GBP4Q96PP9 640 aa16.81■□□□□ 0.28
SHC1-202ENST00000368445 LARP6Q9BRS8 491 aaKnown RBP16.8■□□□□ 0.28
SHC1-202ENST00000368445 BOLA2Q9H3K6 86 aa16.8■□□□□ 0.28
SHC1-202ENST00000368445 ADAMTS2O95450 1211 aa16.8■□□□□ 0.28
SHC1-202ENST00000368445 BTG4Q9NY30 223 aa16.8■□□□□ 0.28
SHC1-202ENST00000368445 GOLGA6L22H0YM25 854 aa16.8■□□□□ 0.28
SHC1-202ENST00000368445 TNS3Q68CZ2 1445 aa16.8■□□□□ 0.28
SHC1-202ENST00000368445 TNPO1Q92973 898 aaKnown RBP16.79■□□□□ 0.28
SHC1-202ENST00000368445 KDM4FA0A1W2PPD8 638 aa16.79■□□□□ 0.28
SHC1-202ENST00000368445 TRAK2O60296 914 aa16.79■□□□□ 0.28
SHC1-202ENST00000368445 NEUROD6Q96NK8 337 aa16.79■□□□□ 0.28
SHC1-202ENST00000368445 SSFA2P28290 1259 aa16.78■□□□□ 0.28
SHC1-202ENST00000368445 OSBPL3Q9H4L5 887 aa16.78■□□□□ 0.28
SHC1-202ENST00000368445 NUTM2BA6NNL0 878 aaPredicted RBP16.78■□□□□ 0.28
SHC1-202ENST00000368445 NUTM2EB1AL46 878 aaPredicted RBP16.78■□□□□ 0.28
SHC1-202ENST00000368445 NUTM2AQ8IVF1 878 aaPredicted RBP16.78■□□□□ 0.28
SHC1-202ENST00000368445 TMOD3Q9NYL9 352 aa16.78■□□□□ 0.28
SHC1-202ENST00000368445 IGKV5-2P06315 115 aa16.78■□□□□ 0.28
SHC1-202ENST00000368445 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.78■□□□□ 0.283e-6■■■□□ 16.2
SHC1-202ENST00000368445 RGPD2P0DJD1 1756 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms