RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 LAMB4A4D0S4 1761 aa15.61■□□□□ 0.09
CAPN9-203ENST00000366666 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.61■□□□□ 0.09
CAPN9-203ENST00000366666 SLC4A9Q96Q91 983 aa15.61■□□□□ 0.09
CAPN9-203ENST00000366666 HOXB7P09629 217 aa15.6■□□□□ 0.09
CAPN9-203ENST00000366666 CCDC30Q5VVM6 783 aa15.6■□□□□ 0.09
CAPN9-203ENST00000366666 ZKSCAN2Q63HK3 967 aa15.6■□□□□ 0.09
CAPN9-203ENST00000366666 ATF7IPQ6VMQ6 1270 aa15.6■□□□□ 0.09
CAPN9-203ENST00000366666 PHAXQ9H814 394 aaKnown RBP15.6■□□□□ 0.09
CAPN9-203ENST00000366666 BTAF1O14981 1849 aa15.6■□□□□ 0.09
CAPN9-203ENST00000366666 KIF16BQ96L93 1317 aa15.6■□□□□ 0.09
CAPN9-203ENST00000366666 RGS12O14924 1447 aa15.59■□□□□ 0.09
CAPN9-203ENST00000366666 SNRPA1P09661 255 aaKnown RBP15.59■□□□□ 0.09
CAPN9-203ENST00000366666 ILDR1Q86SU0 546 aaPredicted RBP15.59■□□□□ 0.09
CAPN9-203ENST00000366666 RBM42Q9BTD8 480 aaKnown RBP15.59■□□□□ 0.09
CAPN9-203ENST00000366666 COG6Q9Y2V7 657 aa15.59■□□□□ 0.09
CAPN9-203ENST00000366666 NHSQ6T4R5 1651 aa15.59■□□□□ 0.09
CAPN9-203ENST00000366666 PDIA6Q15084 440 aa15.59■□□□□ 0.09
CAPN9-203ENST00000366666 SOS1Q07889 1333 aaPredicted RBP15.59■□□□□ 0.09
CAPN9-203ENST00000366666 STK31Q9BXU1 1019 aa15.58■□□□□ 0.08
CAPN9-203ENST00000366666 TJP1Q07157 1748 aa15.58■□□□□ 0.08
CAPN9-203ENST00000366666 RXRBP28702 533 aa15.58■□□□□ 0.08
CAPN9-203ENST00000366666 PDE3AQ14432 1141 aa15.57■□□□□ 0.08
CAPN9-203ENST00000366666 KRT27Q7Z3Y8 459 aa15.57■□□□□ 0.08
CAPN9-203ENST00000366666 DZIP1LQ8IYY4 767 aaKnown RBP15.57■□□□□ 0.08
CAPN9-203ENST00000366666 F6X3S4 739 aa15.56■□□□□ 0.08
CAPN9-203ENST00000366666 FLIIQ13045 1269 aa15.56■□□□□ 0.08
CAPN9-203ENST00000366666 MYL6BP14649 208 aa15.56■□□□□ 0.08
CAPN9-203ENST00000366666 DNAJC10Q8IXB1 793 aa15.56■□□□□ 0.08
CAPN9-203ENST00000366666 TMEM57Q8N5G2 664 aa15.56■□□□□ 0.08
CAPN9-203ENST00000366666 IPO8O15397 1037 aaKnown RBP15.55■□□□□ 0.08
CAPN9-203ENST00000366666 A1BGP04217 495 aa15.55■□□□□ 0.08
CAPN9-203ENST00000366666 KCNQ4P56696 695 aa15.55■□□□□ 0.08
CAPN9-203ENST00000366666 B4GALNT3Q6L9W6 998 aa15.55■□□□□ 0.08
CAPN9-203ENST00000366666 NBPF26B4DH59 902 aa15.55■□□□□ 0.08
CAPN9-203ENST00000366666 NBPF14Q5TI25 921 aa15.55■□□□□ 0.08
CAPN9-203ENST00000366666 NBPF10Q6P3W6 841 aaKnown RBP15.55■□□□□ 0.08
CAPN9-203ENST00000366666 FTSJ3Q8IY81 847 aaKnown RBP15.55■□□□□ 0.08
CAPN9-203ENST00000366666 NBPF15Q8N660 670 aa15.55■□□□□ 0.08
CAPN9-203ENST00000366666 PALLDQ8WX93 1383 aa15.55■□□□□ 0.08
CAPN9-203ENST00000366666 ARHGAP45Q92619 1136 aa15.55■□□□□ 0.08
CAPN9-203ENST00000366666 DBF4Q9UBU7 674 aaPredicted RBP15.55■□□□□ 0.08
CAPN9-203ENST00000366666 LRP10Q7Z4F1 713 aa15.54■□□□□ 0.08
CAPN9-203ENST00000366666 FKBP5Q13451 457 aaPredicted RBP15.53■□□□□ 0.08
CAPN9-203ENST00000366666 ABCC4O15439 1325 aa15.53■□□□□ 0.08
CAPN9-203ENST00000366666 DDX21Q9NR30 783 aaKnown RBP eCLIP15.53■□□□□ 0.08
CAPN9-203ENST00000366666 PTPRCP08575 1304 aa15.52■□□□□ 0.08
CAPN9-203ENST00000366666 MYH14Q7Z406 1995 aaKnown RBP15.52■□□□□ 0.08
CAPN9-203ENST00000366666 AIMP1Q12904 312 aaKnown RBP15.52■□□□□ 0.08
CAPN9-203ENST00000366666 MVPQ14764 893 aaKnown RBP15.52■□□□□ 0.08
CAPN9-203ENST00000366666 LOC102724428A0A0B4J2F2 783 aa15.52■□□□□ 0.07
CAPN9-203ENST00000366666 SIK1P57059 783 aa15.52■□□□□ 0.07
CAPN9-203ENST00000366666 ITPK1Q13572 414 aa15.52■□□□□ 0.07
CAPN9-203ENST00000366666 ITPRIPQ8IWB1 547 aa15.52■□□□□ 0.07
CAPN9-203ENST00000366666 TRIM37O94972 964 aa15.51■□□□□ 0.07
CAPN9-203ENST00000366666 VSIG10Q8N0Z9 540 aa15.51■□□□□ 0.07
CAPN9-203ENST00000366666 API5Q9BZZ5 524 aaKnown RBP15.51■□□□□ 0.07
CAPN9-203ENST00000366666 LY75O60449 1722 aa15.51■□□□□ 0.07
CAPN9-203ENST00000366666 CYP19A1P11511 503 aaPredicted RBP15.51■□□□□ 0.07
CAPN9-203ENST00000366666 ATP6V1AP38606 617 aa15.51■□□□□ 0.07
CAPN9-203ENST00000366666 SLC4A10Q6U841 1118 aa15.51■□□□□ 0.07
CAPN9-203ENST00000366666 COL5A3P25940 1745 aaPredicted RBP15.5■□□□□ 0.07
CAPN9-203ENST00000366666 ADCY9O60503 1353 aa15.5■□□□□ 0.07
CAPN9-203ENST00000366666 PI4KAP2A4QPH2 592 aa15.5■□□□□ 0.07
CAPN9-203ENST00000366666 FAM196AQ6ZSG2 479 aa15.5■□□□□ 0.07
CAPN9-203ENST00000366666 PI4KAP1Q8N8J0 262 aa15.5■□□□□ 0.07
CAPN9-203ENST00000366666 XAGE3Q8WTP9 111 aa15.5■□□□□ 0.07
CAPN9-203ENST00000366666 COPS6Q7L5N1 327 aa15.49■□□□□ 0.07
CAPN9-203ENST00000366666 HYPKQ9NX55 129 aa15.49■□□□□ 0.07
CAPN9-203ENST00000366666 CICQ96RK0 1608 aaPredicted RBP15.48■□□□□ 0.07
CAPN9-203ENST00000366666 BCL11BQ9C0K0 894 aaPredicted RBP15.48■□□□□ 0.07
CAPN9-203ENST00000366666 N4BP2Q86UW6 1770 aaPredicted RBP15.48■□□□□ 0.07
CAPN9-203ENST00000366666 SMARCC1Q92922 1105 aaPredicted RBP15.48■□□□□ 0.07
CAPN9-203ENST00000366666 ZBTB1Q9Y2K1 713 aa15.48■□□□□ 0.07
CAPN9-203ENST00000366666 ARFGEF2Q9Y6D5 1785 aa15.47■□□□□ 0.07
CAPN9-203ENST00000366666 TAF1LQ8IZX4 1826 aa15.47■□□□□ 0.07
CAPN9-203ENST00000366666 MS4A1P11836 297 aa15.47■□□□□ 0.07
CAPN9-203ENST00000366666 DEKP35659 375 aaKnown RBP15.47■□□□□ 0.07
CAPN9-203ENST00000366666 INTS3Q68E01 1043 aaKnown RBP15.47■□□□□ 0.07
CAPN9-203ENST00000366666 TTLL7Q6ZT98 887 aa15.47■□□□□ 0.07
CAPN9-203ENST00000366666 CHMP4AQ9BY43 222 aa15.47■□□□□ 0.07
CAPN9-203ENST00000366666 ZNF330Q9Y3S2 320 aaPredicted RBP15.47■□□□□ 0.07
CAPN9-203ENST00000366666 ZNF831Q5JPB2 1677 aa15.47■□□□□ 0.07
CAPN9-203ENST00000366666 STARD3NLO95772 234 aa15.46■□□□□ 0.07
CAPN9-203ENST00000366666 LINC00116Q8NCU8 138 aa15.46■□□□□ 0.07
CAPN9-203ENST00000366666 TEX13AQ9BXU3 409 aaPredicted RBP15.46■□□□□ 0.07
CAPN9-203ENST00000366666 MAP3K2Q9Y2U5 619 aa15.46■□□□□ 0.07
CAPN9-203ENST00000366666 ZBTB7BO15156 539 aaPredicted RBP15.46■□□□□ 0.07
CAPN9-203ENST00000366666 INTS5Q6P9B9 1019 aaKnown RBP15.46■□□□□ 0.07
CAPN9-203ENST00000366666 NUP188Q5SRE5 1749 aa15.46■□□□□ 0.06
CAPN9-203ENST00000366666 CRKLP46109 303 aaKnown RBP15.45■□□□□ 0.06
CAPN9-203ENST00000366666 SMIM5Q71RC9 77 aa15.45■□□□□ 0.06
CAPN9-203ENST00000366666 ERBB4Q15303 1308 aa15.45■□□□□ 0.06
CAPN9-203ENST00000366666 RREB1Q92766 1687 aa15.45■□□□□ 0.06
CAPN9-203ENST00000366666 KSR2Q6VAB6 950 aa15.45■□□□□ 0.06
CAPN9-203ENST00000366666 DNAAF4Q8WXU2 420 aa15.45■□□□□ 0.06
CAPN9-203ENST00000366666 C1orf115Q9H7X2 142 aa15.45■□□□□ 0.06
CAPN9-203ENST00000366666 DDX19BQ9UMR2 479 aa15.45■□□□□ 0.06
CAPN9-203ENST00000366666 LRRC4BQ9NT99 713 aa15.44■□□□□ 0.06
CAPN9-203ENST00000366666 ZBTB40Q9NUA8 1239 aa15.44■□□□□ 0.06
CAPN9-203ENST00000366666 NOP58Q9Y2X3 529 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms