RNA–Protein interactions for RNA: ENST00000361603.6

COL4A5-202, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS P3 TSL 2 BASIC

Gene COL4A5, Length 6,469 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-202ENST00000361603 LRRFIP2Q9Y608 721 aaKnown RBP13.47□□□□□ -0.25
COL4A5-202ENST00000361603 SAMD9LQ8IVG5 1584 aa13.47□□□□□ -0.25
COL4A5-202ENST00000361603 EXOC6BQ9Y2D4 811 aa13.47□□□□□ -0.25
COL4A5-202ENST00000361603 PPP4R3BQ5MIZ7 849 aa13.47□□□□□ -0.25
COL4A5-202ENST00000361603 TXLNBQ8N3L3 684 aa13.47□□□□□ -0.25
COL4A5-202ENST00000361603 STIM1Q13586 685 aa13.46□□□□□ -0.25
COL4A5-202ENST00000361603 CWC27Q6UX04 472 aaKnown RBP13.46□□□□□ -0.25
COL4A5-202ENST00000361603 PHAXQ9H814 394 aaKnown RBP13.46□□□□□ -0.25
COL4A5-202ENST00000361603 HMG20BQ9P0W2 317 aa13.46□□□□□ -0.25
COL4A5-202ENST00000361603 TSPY26PQ9H489 355 aa13.46□□□□□ -0.25
COL4A5-202ENST00000361603 LARP1BQ659C4 914 aaKnown RBP13.46□□□□□ -0.25
COL4A5-202ENST00000361603 R3HCC1Q9Y3T6 440 aaKnown RBP13.46□□□□□ -0.25
COL4A5-202ENST00000361603 IDH1O75874 414 aaKnown RBP13.46□□□□□ -0.25
COL4A5-202ENST00000361603 HSP90AB2PQ58FF8 381 aa13.46□□□□□ -0.25
COL4A5-202ENST00000361603 ANKRD13DQ6ZTN6 518 aa13.46□□□□□ -0.25
COL4A5-202ENST00000361603 CCAR1Q8IX12 1150 aaKnown RBP13.46□□□□□ -0.26
COL4A5-202ENST00000361603 ZFYP08048 801 aaPredicted RBP13.45□□□□□ -0.26
COL4A5-202ENST00000361603 KSR2Q6VAB6 950 aa13.45□□□□□ -0.26
COL4A5-202ENST00000361603 HECW2Q9P2P5 1572 aa13.45□□□□□ -0.26
COL4A5-202ENST00000361603 HMGN5P82970 282 aaKnown RBP13.45□□□□□ -0.26
COL4A5-202ENST00000361603 CCDC152Q4G0S7 254 aa13.45□□□□□ -0.26
COL4A5-202ENST00000361603 CCDC178Q5BJE1 867 aa13.45□□□□□ -0.26
COL4A5-202ENST00000361603 SMARCE1Q969G3 411 aa13.45□□□□□ -0.26
COL4A5-202ENST00000361603 TRAK2O60296 914 aa13.45□□□□□ -0.26
COL4A5-202ENST00000361603 EPS15P42566 896 aa13.45□□□□□ -0.26
COL4A5-202ENST00000361603 NUTM1Q86Y26 1132 aa13.45□□□□□ -0.26
COL4A5-202ENST00000361603 MAGEC2Q9UBF1 373 aaPredicted RBP13.45□□□□□ -0.26
COL4A5-202ENST00000361603 SHROOM2Q13796 1616 aa13.45□□□□□ -0.26
COL4A5-202ENST00000361603 PLEKHG3A1L390 1219 aa13.45□□□□□ -0.26
COL4A5-202ENST00000361603 NLRP1Q9C000 1473 aa13.45□□□□□ -0.26
COL4A5-202ENST00000361603 GSTO1P78417 241 aa13.45□□□□□ -0.26
COL4A5-202ENST00000361603 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.44□□□□□ -0.26
COL4A5-202ENST00000361603 ZCCHC11Q5TAX3 1644 aaKnown RBP13.44□□□□□ -0.26
COL4A5-202ENST00000361603 ST5P78524 1137 aa13.44□□□□□ -0.26
COL4A5-202ENST00000361603 CCDC192P0DO97 292 aa13.44□□□□□ -0.26
COL4A5-202ENST00000361603 BICDL1Q6ZP65 573 aa13.44□□□□□ -0.26
COL4A5-202ENST00000361603 NYXQ9GZU5 481 aa13.44□□□□□ -0.26
COL4A5-202ENST00000361603 HOXC9P31274 260 aa13.44□□□□□ -0.26
COL4A5-202ENST00000361603 DDX46Q7L014 1031 aaKnown RBP13.44□□□□□ -0.26
COL4A5-202ENST00000361603 PLEKHG1Q9ULL1 1385 aa13.44□□□□□ -0.26
COL4A5-202ENST00000361603 CHD1O14646 1710 aa13.44□□□□□ -0.26
COL4A5-202ENST00000361603 EFCAB6Q5THR3 1501 aa13.44□□□□□ -0.26
COL4A5-202ENST00000361603 GCP02774 474 aa13.44□□□□□ -0.26
COL4A5-202ENST00000361603 RBM5P52756 815 aaKnown RBP eCLIP13.43□□□□□ -0.26
COL4A5-202ENST00000361603 ZGPATQ8N5A5 531 aaKnown RBP13.43□□□□□ -0.26
COL4A5-202ENST00000361603 MRPL50Q8N5N7 158 aaKnown RBP13.43□□□□□ -0.26
COL4A5-202ENST00000361603 NAPBQ9H115 298 aa13.43□□□□□ -0.26
COL4A5-202ENST00000361603 DDB1Q16531 1140 aa13.43□□□□□ -0.26
COL4A5-202ENST00000361603 WWC2Q6AWC2 1192 aa13.43□□□□□ -0.26
COL4A5-202ENST00000361603 DZIP1Q86YF9 867 aaKnown RBP13.43□□□□□ -0.26
COL4A5-202ENST00000361603 UBAP1LF5GYI3 381 aa13.43□□□□□ -0.26
COL4A5-202ENST00000361603 BMP2KQ9NSY1 1161 aaPredicted RBP13.42□□□□□ -0.26
COL4A5-202ENST00000361603 ADCY10Q96PN6 1610 aa13.42□□□□□ -0.26
COL4A5-202ENST00000361603 CBFA2T2O43439 604 aa13.42□□□□□ -0.26
COL4A5-202ENST00000361603 NCKAP5LQ9HCH0 1330 aa13.42□□□□□ -0.26
COL4A5-202ENST00000361603 PI4KAP2A4QPH2 592 aa13.42□□□□□ -0.26
COL4A5-202ENST00000361603 USP5P45974 858 aa13.42□□□□□ -0.26
COL4A5-202ENST00000361603 PI4KAP1Q8N8J0 262 aa13.42□□□□□ -0.26
COL4A5-202ENST00000361603 ANKIB1Q9P2G1 1089 aa13.42□□□□□ -0.26
COL4A5-202ENST00000361603 NASPP49321 788 aaPredicted RBP13.42□□□□□ -0.26
COL4A5-202ENST00000361603 FOSBP53539 338 aa13.42□□□□□ -0.26
COL4A5-202ENST00000361603 LINS1Q8NG48 757 aa13.42□□□□□ -0.26
COL4A5-202ENST00000361603 ZNF771Q7L3S4 317 aaPredicted RBP13.41□□□□□ -0.26
COL4A5-202ENST00000361603 ANKRD44Q8N8A2 993 aa13.41□□□□□ -0.26
COL4A5-202ENST00000361603 BAG3O95817 575 aa13.41□□□□□ -0.26
COL4A5-202ENST00000361603 IQCA1Q86XH1 822 aa13.41□□□□□ -0.26
COL4A5-202ENST00000361603 KDM5AP29375 1690 aaKnown RBP13.41□□□□□ -0.26
COL4A5-202ENST00000361603 IL15P40933 162 aaPredicted RBP13.41□□□□□ -0.26
COL4A5-202ENST00000361603 RTL1A6NKG5 1358 aa13.41□□□□□ -0.26
COL4A5-202ENST00000361603 F6X3S4 739 aa13.41□□□□□ -0.26
COL4A5-202ENST00000361603 KRT18P05783 430 aaKnown RBP13.41□□□□□ -0.26
COL4A5-202ENST00000361603 NUP133Q8WUM0 1156 aa13.41□□□□□ -0.26
COL4A5-202ENST00000361603 LUC7LQ9NQ29 371 aaKnown RBP13.41□□□□□ -0.26
COL4A5-202ENST00000361603 CASTP20810 708 aaKnown RBP13.41□□□□□ -0.26
COL4A5-202ENST00000361603 ATP8B2P98198 1209 aa13.4□□□□□ -0.26
COL4A5-202ENST00000361603 HOMER1Q86YM7 354 aa13.4□□□□□ -0.26
COL4A5-202ENST00000361603 PER1O15534 1290 aaPredicted RBP13.4□□□□□ -0.26
COL4A5-202ENST00000361603 PRPF40AO75400 957 aaKnown RBP13.4□□□□□ -0.26
COL4A5-202ENST00000361603 MAP4K4O95819 1239 aaPredicted RBP13.4□□□□□ -0.26
COL4A5-202ENST00000361603 RFC4P35249 363 aa13.4□□□□□ -0.26
COL4A5-202ENST00000361603 SETQ01105 290 aaPredicted RBP13.4□□□□□ -0.26
COL4A5-202ENST00000361603 MTHFSDQ2M296 383 aaKnown RBP13.4□□□□□ -0.26
COL4A5-202ENST00000361603 RDXP35241 583 aaKnown RBP13.4□□□□□ -0.26
COL4A5-202ENST00000361603 TRAF1Q13077 416 aa13.4□□□□□ -0.26
COL4A5-202ENST00000361603 CHRNA2Q15822 529 aa13.4□□□□□ -0.26
COL4A5-202ENST00000361603 TTC22Q5TAA0 569 aa13.4□□□□□ -0.26
COL4A5-202ENST00000361603 SPATA32Q96LK8 384 aa13.4□□□□□ -0.26
COL4A5-202ENST00000361603 ABCF2Q9UG63 623 aa13.4□□□□□ -0.26
COL4A5-202ENST00000361603 TTC41PQ6P2S7 1318 aa13.4□□□□□ -0.26
COL4A5-202ENST00000361603 CCDC173Q0VFZ6 552 aa13.4□□□□□ -0.26
COL4A5-202ENST00000361603 LDHAL6AQ6ZMR3 332 aa13.4□□□□□ -0.26
COL4A5-202ENST00000361603 CTCFLQ8NI51 663 aaPredicted RBP13.4□□□□□ -0.26
COL4A5-202ENST00000361603 SCAND2PQ9GZW5 306 aaPredicted RBP13.4□□□□□ -0.26
COL4A5-202ENST00000361603 ZBTB3Q9H5J0 574 aa13.4□□□□□ -0.26
COL4A5-202ENST00000361603 EHMT1Q9H9B1 1298 aa13.4□□□□□ -0.26
COL4A5-202ENST00000361603 SEC63Q9UGP8 760 aaKnown RBP13.4□□□□□ -0.26
COL4A5-202ENST00000361603 POLR3DP05423 398 aaPredicted RBP13.39□□□□□ -0.27
COL4A5-202ENST00000361603 ZSCAN29Q8IWY8 852 aaPredicted RBP13.39□□□□□ -0.27
COL4A5-202ENST00000361603 ACBD3Q9H3P7 528 aa13.39□□□□□ -0.27
COL4A5-202ENST00000361603 ZNF213O14771 459 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms