RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 LUC7LQ9NQ29 371 aaKnown RBP15.84■□□□□ 0.13
LDB3-202ENST00000361373 ZFYVE9O95405 1425 aa15.84■□□□□ 0.13
LDB3-202ENST00000361373 NPATQ14207 1427 aa15.84■□□□□ 0.13
LDB3-202ENST00000361373 PI4KAP2A4QPH2 592 aa15.84■□□□□ 0.13
LDB3-202ENST00000361373 CDR1P51861 262 aa15.84■□□□□ 0.13
LDB3-202ENST00000361373 DDX46Q7L014 1031 aaKnown RBP15.84■□□□□ 0.13
LDB3-202ENST00000361373 PI4KAP1Q8N8J0 262 aa15.84■□□□□ 0.13
LDB3-202ENST00000361373 ATP10AO60312 1499 aa15.84■□□□□ 0.13
LDB3-202ENST00000361373 PLEKHH1Q9ULM0 1364 aa15.84■□□□□ 0.13
LDB3-202ENST00000361373 SOS1Q07889 1333 aaPredicted RBP15.84■□□□□ 0.13
LDB3-202ENST00000361373 SPATA32Q96LK8 384 aa15.84■□□□□ 0.13
LDB3-202ENST00000361373 ACBD3Q9H3P7 528 aa15.84■□□□□ 0.13
LDB3-202ENST00000361373 CEBPZQ03701 1054 aaKnown RBP15.84■□□□□ 0.13
LDB3-202ENST00000361373 TXLNBQ8N3L3 684 aa15.84■□□□□ 0.13
LDB3-202ENST00000361373 CRACR2BQ8N4Y2 399 aaPredicted RBP15.84■□□□□ 0.13
LDB3-202ENST00000361373 ZNHIT6Q9NWK9 470 aaKnown RBP15.84■□□□□ 0.13
LDB3-202ENST00000361373 SPTY2D1Q68D10 685 aaPredicted RBP15.83■□□□□ 0.12
LDB3-202ENST00000361373 SMC2O95347 1197 aa15.83■□□□□ 0.12
LDB3-202ENST00000361373 STK11IPQ8N1F8 1099 aa15.83■□□□□ 0.12
LDB3-202ENST00000361373 UQCRFS1P1P0C7P4 283 aa15.82■□□□□ 0.12
LDB3-202ENST00000361373 FAM43AQ8N2R8 423 aa15.82■□□□□ 0.12
LDB3-202ENST00000361373 RNF214Q8ND24 703 aa15.82■□□□□ 0.12
LDB3-202ENST00000361373 HMGN5P82970 282 aaKnown RBP15.82■□□□□ 0.12
LDB3-202ENST00000361373 CTCFLQ8NI51 663 aaPredicted RBP15.82■□□□□ 0.12
LDB3-202ENST00000361373 WDHD1O75717 1129 aaPredicted RBP15.82■□□□□ 0.12
LDB3-202ENST00000361373 SYCP1Q15431 976 aa15.82■□□□□ 0.12
LDB3-202ENST00000361373 SEC63Q9UGP8 760 aaKnown RBP15.82■□□□□ 0.12
LDB3-202ENST00000361373 RFC4P35249 363 aa15.82■□□□□ 0.12
LDB3-202ENST00000361373 ZNF213O14771 459 aa15.81■□□□□ 0.12
LDB3-202ENST00000361373 LRRC59Q96AG4 307 aaKnown RBP15.81■□□□□ 0.12
LDB3-202ENST00000361373 CCDC8Q9H0W5 538 aaPredicted RBP15.81■□□□□ 0.12
LDB3-202ENST00000361373 CFAP43Q8NDM7 1665 aa15.81■□□□□ 0.12
LDB3-202ENST00000361373 GPTP24298 496 aa15.81■□□□□ 0.12
LDB3-202ENST00000361373 PRPF40BQ6NWY9 871 aaKnown RBP15.81■□□□□ 0.12
LDB3-202ENST00000361373 UBE3BQ7Z3V4 1068 aa15.81■□□□□ 0.12
LDB3-202ENST00000361373 POLKQ9UBT6 870 aa15.81■□□□□ 0.12
LDB3-202ENST00000361373 CCDC152Q4G0S7 254 aa15.81■□□□□ 0.12
LDB3-202ENST00000361373 ZNF444Q8N0Y2 327 aaPredicted RBP15.81■□□□□ 0.12
LDB3-202ENST00000361373 DISP1Q96F81 1524 aa15.81■□□□□ 0.12
LDB3-202ENST00000361373 EIF4A2Q14240 407 aaKnown RBP15.81■□□□□ 0.12
LDB3-202ENST00000361373 BMP2KLQ5H9B9 411 aa15.81■□□□□ 0.12
LDB3-202ENST00000361373 PHAXQ9H814 394 aaKnown RBP15.81■□□□□ 0.12
LDB3-202ENST00000361373 SMARCA5O60264 1052 aaPredicted RBP15.81■□□□□ 0.12
LDB3-202ENST00000361373 SPINK5Q9NQ38 1064 aaPredicted RBP15.81■□□□□ 0.12
LDB3-202ENST00000361373 PARD3Q8TEW0 1356 aa15.8■□□□□ 0.12
LDB3-202ENST00000361373 MINDY4BA8MYZ0 360 aa15.8■□□□□ 0.12
LDB3-202ENST00000361373 CBFA2T2O43439 604 aa15.8■□□□□ 0.12
LDB3-202ENST00000361373 IL2RBP14784 551 aa15.8■□□□□ 0.12
LDB3-202ENST00000361373 ZNF76P36508 570 aa15.8■□□□□ 0.12
LDB3-202ENST00000361373 MYO6Q9UM54 1294 aa15.8■□□□□ 0.12
LDB3-202ENST00000361373 YTHDC2Q9H6S0 1430 aaKnown RBP15.8■□□□□ 0.12
LDB3-202ENST00000361373 BAG3O95817 575 aa15.8■□□□□ 0.12
LDB3-202ENST00000361373 DDB1Q16531 1140 aa15.8■□□□□ 0.12
LDB3-202ENST00000361373 FAM83GA6ND36 823 aa15.8■□□□□ 0.12
LDB3-202ENST00000361373 CEP57L1Q8IYX8 460 aa15.79■□□□□ 0.12
LDB3-202ENST00000361373 ARID3AQ99856 593 aa15.79■□□□□ 0.12
LDB3-202ENST00000361373 KIF21AQ7Z4S6 1674 aa15.79■□□□□ 0.12
LDB3-202ENST00000361373 ABCC1P33527 1531 aa15.79■□□□□ 0.12
LDB3-202ENST00000361373 TESK2Q96S53 571 aa15.79■□□□□ 0.12
LDB3-202ENST00000361373 ST5P78524 1137 aa15.79■□□□□ 0.12
LDB3-202ENST00000361373 SERPINC1P01008 464 aa15.79■□□□□ 0.12
LDB3-202ENST00000361373 SCAND2PQ9GZW5 306 aaPredicted RBP15.79■□□□□ 0.12
LDB3-202ENST00000361373 UHRF1BP1Q6BDS2 1440 aa15.79■□□□□ 0.12
LDB3-202ENST00000361373 ADGRL2O95490 1459 aa15.78■□□□□ 0.12
LDB3-202ENST00000361373 C6orf229H3BNL8 230 aa15.78■□□□□ 0.12
LDB3-202ENST00000361373 TNIP1Q15025 636 aa15.78■□□□□ 0.12
LDB3-202ENST00000361373 C20orf194Q5TEA3 1177 aa15.78■□□□□ 0.12
LDB3-202ENST00000361373 RUFY1Q96T51 708 aa15.78■□□□□ 0.12
LDB3-202ENST00000361373 CDCA7Q9BWT1 371 aaPredicted RBP15.78■□□□□ 0.12
LDB3-202ENST00000361373 MAPKBP1O60336 1514 aa15.78■□□□□ 0.12
LDB3-202ENST00000361373 GCP02774 474 aa15.78■□□□□ 0.12
LDB3-202ENST00000361373 ZFYP08048 801 aaPredicted RBP15.78■□□□□ 0.12
LDB3-202ENST00000361373 HDAC1Q13547 482 aaPredicted RBP15.78■□□□□ 0.12
LDB3-202ENST00000361373 KSR2Q6VAB6 950 aa15.78■□□□□ 0.12
LDB3-202ENST00000361373 PPFIBP1Q86W92 1011 aa15.78■□□□□ 0.12
LDB3-202ENST00000361373 HMG20BQ9P0W2 317 aa15.78■□□□□ 0.12
LDB3-202ENST00000361373 PIK3C2GO75747 1445 aa15.78■□□□□ 0.12
LDB3-202ENST00000361373 NUP62CLQ9H1M0 184 aa15.78■□□□□ 0.12
LDB3-202ENST00000361373 DCAF5Q96JK2 942 aa15.77■□□□□ 0.12
LDB3-202ENST00000361373 NEO1Q92859 1461 aa15.77■□□□□ 0.12
LDB3-202ENST00000361373 MPHOSPH10O00566 681 aaKnown RBP15.77■□□□□ 0.12
LDB3-202ENST00000361373 KCNA6P17658 529 aa15.77■□□□□ 0.12
LDB3-202ENST00000361373 NBPF6Q5VWK0 638 aa15.77■□□□□ 0.12
LDB3-202ENST00000361373 NBPF5PQ86XG9 351 aaPredicted RBP15.77■□□□□ 0.12
LDB3-202ENST00000361373 NBPF4Q96M43 638 aa15.77■□□□□ 0.12
LDB3-202ENST00000361373 ATP5J2-PTCD1G3V325 749 aa15.77■□□□□ 0.11
LDB3-202ENST00000361373 ZFYVE27Q5T4F4 411 aa15.77■□□□□ 0.11
LDB3-202ENST00000361373 BCL11BQ9C0K0 894 aaPredicted RBP15.77■□□□□ 0.11
LDB3-202ENST00000361373 LIMCH1Q9UPQ0 1083 aa15.77■□□□□ 0.11
LDB3-202ENST00000361373 TEX35Q5T0J7 233 aa15.76■□□□□ 0.11
LDB3-202ENST00000361373 RAB34Q9BZG1 259 aa15.76■□□□□ 0.11
LDB3-202ENST00000361373 ZHX3Q9H4I2 956 aa15.76■□□□□ 0.11
LDB3-202ENST00000361373 SLC12A7Q9Y666 1083 aa15.76■□□□□ 0.11
LDB3-202ENST00000361373 GSTO1P78417 241 aa15.76■□□□□ 0.11
LDB3-202ENST00000361373 IP6K1Q92551 441 aa15.76■□□□□ 0.11
LDB3-202ENST00000361373 SMTNL1A8MU46 457 aa15.76■□□□□ 0.11
LDB3-202ENST00000361373 ATP7AQ04656 1500 aa15.76■□□□□ 0.11
LDB3-202ENST00000361373 DNMT1P26358 1616 aaKnown RBP15.76■□□□□ 0.11
LDB3-202ENST00000361373 XAGE3Q8WTP9 111 aa15.76■□□□□ 0.11
LDB3-202ENST00000361373 ERCC4Q92889 916 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms