RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 KIF7Q2M1P5 1343 aa28.66■■■□□ 2.18
CD47-202ENST00000361309 UBR2Q8IWV8 1755 aa28.65■■■□□ 2.18
CD47-202ENST00000361309 NRXN2Q9P2S2 1712 aa28.64■■■□□ 2.18
CD47-202ENST00000361309 MTHFSDQ2M296 383 aaKnown RBP28.64■■■□□ 2.18
CD47-202ENST00000361309 RNF181Q9P0P0 153 aa28.63■■■□□ 2.17
CD47-202ENST00000361309 NARFQ9UHQ1 456 aa28.63■■■□□ 2.17
CD47-202ENST00000361309 ZBTB1Q9Y2K1 713 aa28.63■■■□□ 2.17
CD47-202ENST00000361309 COL15A1P39059 1388 aa28.62■■■□□ 2.17
CD47-202ENST00000361309 NFIXQ14938 502 aa28.62■■■□□ 2.17
CD47-202ENST00000361309 WDR90Q96KV7 1748 aa28.62■■■□□ 2.17
CD47-202ENST00000361309 DLEC1Q9Y238 1755 aa28.62■■■□□ 2.17
CD47-202ENST00000361309 DIAPH1O60610 1272 aaKnown RBP28.61■■■□□ 2.17
CD47-202ENST00000361309 RBM46Q8TBY0 533 aaKnown RBP28.61■■■□□ 2.17
CD47-202ENST00000361309 CCDC88AQ3V6T2 1871 aa28.61■■■□□ 2.17
CD47-202ENST00000361309 C16orf71Q8IYS4 520 aaPredicted RBP28.6■■■□□ 2.17
CD47-202ENST00000361309 TNRC6CQ9HCJ0 1690 aaKnown RBP28.59■■■□□ 2.17
CD47-202ENST00000361309 PER1O15534 1290 aaPredicted RBP28.59■■■□□ 2.17
CD47-202ENST00000361309 CC2D1BQ5T0F9 858 aaKnown RBP28.59■■■□□ 2.17
CD47-202ENST00000361309 DNAJC5GQ8N7S2 189 aa28.59■■■□□ 2.17
CD47-202ENST00000361309 KDM2BQ8NHM5 1336 aa28.59■■■□□ 2.17
CD47-202ENST00000361309 VSIG10Q8N0Z9 540 aa28.58■■■□□ 2.17
CD47-202ENST00000361309 BCL2L12Q9HB09 334 aa28.58■■■□□ 2.17
CD47-202ENST00000361309 SERPINB2P05120 415 aa28.55■■■□□ 2.16
CD47-202ENST00000361309 CANXP27824 592 aaKnown RBP28.55■■■□□ 2.16
CD47-202ENST00000361309 RRAGCQ9HB90 399 aa28.55■■■□□ 2.16
CD47-202ENST00000361309 RASSF7Q02833 373 aa28.54■■■□□ 2.16
CD47-202ENST00000361309 SIPA1L3O60292 1781 aaPredicted RBP28.54■■■□□ 2.16
CD47-202ENST00000361309 TTC5Q8N0Z6 440 aa28.52■■■□□ 2.16
CD47-202ENST00000361309 COL3A1P02461 1466 aaPredicted RBP28.52■■■□□ 2.16
CD47-202ENST00000361309 FSTL1Q12841 308 aa28.51■■■□□ 2.15
CD47-202ENST00000361309 ANKRD31Q8N7Z5 1873 aa28.51■■■□□ 2.15
CD47-202ENST00000361309 STARD3NLO95772 234 aa28.5■■■□□ 2.15
CD47-202ENST00000361309 EIF5P55010 431 aaKnown RBP28.5■■■□□ 2.15
CD47-202ENST00000361309 HTRA3P83110 453 aa28.5■■■□□ 2.15
CD47-202ENST00000361309 BICDL1Q6ZP65 573 aa28.5■■■□□ 2.15
CD47-202ENST00000361309 CARMIL3Q8ND23 1372 aa28.5■■■□□ 2.15
CD47-202ENST00000361309 U2SURPO15042 1029 aaKnown RBP28.49■■■□□ 2.15
CD47-202ENST00000361309 CNGB1Q14028 1251 aaPredicted RBP28.49■■■□□ 2.15
CD47-202ENST00000361309 C2CD5Q86YS7 1000 aa28.49■■■□□ 2.15
CD47-202ENST00000361309 TTLL6Q8N841 843 aa28.49■■■□□ 2.15
CD47-202ENST00000361309 TIAM2Q8IVF5 1701 aa28.49■■■□□ 2.15
CD47-202ENST00000361309 IL17REQ8NFR9 667 aa28.48■■■□□ 2.15
CD47-202ENST00000361309 ZNF496Q96IT1 587 aaPredicted RBP28.48■■■□□ 2.15
CD47-202ENST00000361309 SCN7AQ01118 1682 aa28.48■■■□□ 2.15
CD47-202ENST00000361309 ZC3H4Q9UPT8 1303 aaKnown RBP28.47■■■□□ 2.15
CD47-202ENST00000361309 LMNB1P20700 586 aa28.47■■■□□ 2.15
CD47-202ENST00000361309 PRELPP51888 382 aa28.47■■■□□ 2.15
CD47-202ENST00000361309 TEFQ10587 303 aa28.47■■■□□ 2.15
CD47-202ENST00000361309 A0A087WZG4 1122 aa28.46■■■□□ 2.15
CD47-202ENST00000361309 GNAT3A8MTJ3 354 aa28.46■■■□□ 2.15
CD47-202ENST00000361309 H0YIN7 160 aa28.46■■■□□ 2.15
CD47-202ENST00000361309 ZNF790Q6PG37 636 aa28.46■■■□□ 2.15
CD47-202ENST00000361309 HEG1Q9ULI3 1381 aa28.46■■■□□ 2.15
CD47-202ENST00000361309 GAS2L2Q8NHY3 880 aa28.45■■■□□ 2.14
CD47-202ENST00000361309 TBC1D9BQ66K14 1250 aa28.44■■■□□ 2.14
CD47-202ENST00000361309 NPC1L1Q9UHC9 1359 aa28.44■■■□□ 2.14
CD47-202ENST00000361309 KLRG1Q96E93 195 aa28.43■■■□□ 2.14
CD47-202ENST00000361309 TEX13AQ9BXU3 409 aaPredicted RBP28.43■■■□□ 2.14
CD47-202ENST00000361309 ZNF330Q9Y3S2 320 aaPredicted RBP28.43■■■□□ 2.14
CD47-202ENST00000361309 DICER1Q9UPY3 1922 aaKnown RBP28.43■■■□□ 2.14
CD47-202ENST00000361309 COL11A2P13942 1736 aaPredicted RBP28.43■■■□□ 2.14
CD47-202ENST00000361309 TBC1D2BQ9UPU7 963 aa28.42■■■□□ 2.14
CD47-202ENST00000361309 CACNA1SQ13698 1873 aa28.42■■■□□ 2.14
CD47-202ENST00000361309 FER1L6Q2WGJ9 1857 aa28.41■■■□□ 2.14
CD47-202ENST00000361309 GLTPD2A6NH11 291 aa28.41■■■□□ 2.14
CD47-202ENST00000361309 SMC1BQ8NDV3 1235 aa28.41■■■□□ 2.14
CD47-202ENST00000361309 NFKBIEO00221 500 aa28.4■■■□□ 2.14
CD47-202ENST00000361309 CCDC24Q8N4L8 307 aa28.39■■■□□ 2.14
CD47-202ENST00000361309 ZNF622Q969S3 477 aaKnown RBP eCLIP28.39■■■□□ 2.14
CD47-202ENST00000361309 FMNL2Q96PY5 1086 aa28.39■■■□□ 2.14
CD47-202ENST00000361309 PCNTO95613 3336 aa28.38■■■□□ 2.13
CD47-202ENST00000361309 BCORQ6W2J9 1755 aa28.38■■■□□ 2.13
CD47-202ENST00000361309 VEGFAP15692 232 aaPredicted RBP28.38■■■□□ 2.13
CD47-202ENST00000361309 IL6STP40189 918 aaPredicted RBP28.38■■■□□ 2.13
CD47-202ENST00000361309 BRIP1Q9BX63 1249 aa28.38■■■□□ 2.13
CD47-202ENST00000361309 A1BGP04217 495 aa28.37■■■□□ 2.13
CD47-202ENST00000361309 PDE6BP35913 854 aa28.37■■■□□ 2.13
CD47-202ENST00000361309 PRR5LQ6MZQ0 368 aa28.37■■■□□ 2.13
CD47-202ENST00000361309 JMYQ8N9B5 988 aa28.37■■■□□ 2.13
CD47-202ENST00000361309 CEMIPQ8WUJ3 1361 aa28.37■■■□□ 2.13
CD47-202ENST00000361309 PHACTR3Q96KR7 559 aa28.36■■■□□ 2.13
CD47-202ENST00000361309 ZNF219Q9P2Y4 722 aaPredicted RBP28.36■■■□□ 2.13
CD47-202ENST00000361309 PDZRN3Q9UPQ7 1066 aa28.36■■■□□ 2.13
CD47-202ENST00000361309 KCNQ3O43525 872 aa28.35■■■□□ 2.13
CD47-202ENST00000361309 SLX4Q8IY92 1834 aa28.34■■■□□ 2.13
CD47-202ENST00000361309 C21orf2O43822 256 aa28.34■■■□□ 2.13
CD47-202ENST00000361309 NPM2Q86SE8 214 aaKnown RBP28.34■■■□□ 2.13
CD47-202ENST00000361309 BTBD11A6QL63 1104 aa28.33■■■□□ 2.13
CD47-202ENST00000361309 CAMTA2O94983 1202 aa28.33■■■□□ 2.13
CD47-202ENST00000361309 PRKAR2BP31323 418 aa28.33■■■□□ 2.13
CD47-202ENST00000361309 SETDB2Q96T68 719 aa28.33■■■□□ 2.13
CD47-202ENST00000361309 ARFGEF2Q9Y6D5 1785 aa28.32■■■□□ 2.12
CD47-202ENST00000361309 RSPH6AQ9H0K4 717 aa28.32■■■□□ 2.12
CD47-202ENST00000361309 CNBD1Q8NA66 436 aa28.31■■■□□ 2.12
CD47-202ENST00000361309 POTECB2RU33 542 aa28.3■■■□□ 2.12
CD47-202ENST00000361309 NPHP1O15259 732 aa28.3■■■□□ 2.12
CD47-202ENST00000361309 CFAP53Q96M91 514 aa28.3■■■□□ 2.12
CD47-202ENST00000361309 DPY19L2Q6NUT2 758 aa28.29■■■□□ 2.12
CD47-202ENST00000361309 DZIP3Q86Y13 1208 aaKnown RBP28.29■■■□□ 2.12
CD47-202ENST00000361309 USP16Q9Y5T5 823 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms