RNA–Protein interactions for RNA: ENST00000360982.2

NCKAP1-201, Transcript of NCK associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene NCKAP1, Length 4,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-201ENST00000360982 LDHAL6AQ6ZMR3 332 aa24.11■■□□□ 1.45
NCKAP1-201ENST00000360982 ZNF444Q8N0Y2 327 aaPredicted RBP24.11■■□□□ 1.45
NCKAP1-201ENST00000360982 C19orf44Q9H6X5 657 aa24.11■■□□□ 1.45
NCKAP1-201ENST00000360982 CCDC192P0DO97 292 aa24.11■■□□□ 1.45
NCKAP1-201ENST00000360982 TNIP1Q15025 636 aa24.11■■□□□ 1.45
NCKAP1-201ENST00000360982 CTCFLQ8NI51 663 aaPredicted RBP24.11■■□□□ 1.45
NCKAP1-201ENST00000360982 F6X3S4 739 aa24.1■■□□□ 1.45
NCKAP1-201ENST00000360982 CLCN1P35523 988 aa24.1■■□□□ 1.45
NCKAP1-201ENST00000360982 BRPF1P55201 1214 aaPredicted RBP24.1■■□□□ 1.45
NCKAP1-201ENST00000360982 CEP131Q9UPN4 1083 aa24.1■■□□□ 1.45
NCKAP1-201ENST00000360982 CIZ1Q9ULV3 898 aaPredicted RBP24.1■■□□□ 1.45
NCKAP1-201ENST00000360982 LRRFIP2Q9Y608 721 aaKnown RBP24.09■■□□□ 1.45
NCKAP1-201ENST00000360982 HMGB1P09429 215 aaKnown RBP24.09■■□□□ 1.45
NCKAP1-201ENST00000360982 WDR7Q9Y4E6 1490 aa24.08■■□□□ 1.45
NCKAP1-201ENST00000360982 MPNDQ8N594 471 aa24.08■■□□□ 1.45
NCKAP1-201ENST00000360982 CAGE1Q8TC20 777 aa24.08■■□□□ 1.45
NCKAP1-201ENST00000360982 TNMDQ9H2S6 317 aa24.08■■□□□ 1.45
NCKAP1-201ENST00000360982 PIK3R4Q99570 1358 aa24.08■■□□□ 1.45
NCKAP1-201ENST00000360982 TXLNBQ8N3L3 684 aa24.08■■□□□ 1.45
NCKAP1-201ENST00000360982 SKAP1Q86WV1 359 aa24.08■■□□□ 1.44
NCKAP1-201ENST00000360982 IL16Q14005 1332 aa24.07■■□□□ 1.44
NCKAP1-201ENST00000360982 TTF1Q15361 905 aaPredicted RBP24.07■■□□□ 1.44
NCKAP1-201ENST00000360982 ZHX1Q9UKY1 873 aaPredicted RBP24.07■■□□□ 1.44
NCKAP1-201ENST00000360982 DUOX2Q9NRD8 1548 aa24.07■■□□□ 1.44
NCKAP1-201ENST00000360982 RIMS2Q9UQ26 1411 aa24.07■■□□□ 1.44
NCKAP1-201ENST00000360982 SPATA32Q96LK8 384 aa24.07■■□□□ 1.44
NCKAP1-201ENST00000360982 NKTRP30414 1462 aaKnown RBP24.07■■□□□ 1.44
NCKAP1-201ENST00000360982 SERPINC1P01008 464 aa24.06■■□□□ 1.44
NCKAP1-201ENST00000360982 CASTP20810 708 aaKnown RBP24.06■■□□□ 1.44
NCKAP1-201ENST00000360982 MAP3K2Q9Y2U5 619 aa24.06■■□□□ 1.44
NCKAP1-201ENST00000360982 UNC13AQ9UPW8 1703 aa24.06■■□□□ 1.44
NCKAP1-201ENST00000360982 SPTY2D1Q68D10 685 aaPredicted RBP24.06■■□□□ 1.44
NCKAP1-201ENST00000360982 PDCL2Q8N4E4 241 aa24.05■■□□□ 1.44
NCKAP1-201ENST00000360982 BAG3O95817 575 aa24.05■■□□□ 1.44
NCKAP1-201ENST00000360982 ST5P78524 1137 aa24.05■■□□□ 1.44
NCKAP1-201ENST00000360982 CBX1P83916 185 aa24.05■■□□□ 1.44
NCKAP1-201ENST00000360982 PPFIBP1Q86W92 1011 aa24.05■■□□□ 1.44
NCKAP1-201ENST00000360982 CCDC8Q9H0W5 538 aaPredicted RBP24.05■■□□□ 1.44
NCKAP1-201ENST00000360982 DDB1Q16531 1140 aa24.04■■□□□ 1.44
NCKAP1-201ENST00000360982 NBPF6Q5VWK0 638 aa24.04■■□□□ 1.44
NCKAP1-201ENST00000360982 NBPF5PQ86XG9 351 aaPredicted RBP24.04■■□□□ 1.44
NCKAP1-201ENST00000360982 NBPF4Q96M43 638 aa24.04■■□□□ 1.44
NCKAP1-201ENST00000360982 TANGO6Q9C0B7 1094 aa24.04■■□□□ 1.44
NCKAP1-201ENST00000360982 MAPK8IP2Q13387 824 aaPredicted RBP24.04■■□□□ 1.44
NCKAP1-201ENST00000360982 HSP90B2PQ58FF3 399 aa24.04■■□□□ 1.44
NCKAP1-201ENST00000360982 ANKRD13DQ6ZTN6 518 aa24.04■■□□□ 1.44
NCKAP1-201ENST00000360982 UBE3BQ7Z3V4 1068 aa24.04■■□□□ 1.44
NCKAP1-201ENST00000360982 THOC2Q8NI27 1593 aaKnown RBP24.04■■□□□ 1.44
NCKAP1-201ENST00000360982 ZNF213O14771 459 aa24.04■■□□□ 1.44
NCKAP1-201ENST00000360982 TTLL12Q14166 644 aaPredicted RBP24.04■■□□□ 1.44
NCKAP1-201ENST00000360982 ECHDC1Q9NTX5 307 aa24.04■■□□□ 1.44
NCKAP1-201ENST00000360982 ABCC10Q5T3U5 1492 aa24.04■■□□□ 1.44
NCKAP1-201ENST00000360982 BIVM-ERCC5R4GMW8 1640 aa24.04■■□□□ 1.44
NCKAP1-201ENST00000360982 PI4KAP2A4QPH2 592 aa24.03■■□□□ 1.44
NCKAP1-201ENST00000360982 CEP57L1Q8IYX8 460 aa24.03■■□□□ 1.44
NCKAP1-201ENST00000360982 PI4KAP1Q8N8J0 262 aa24.03■■□□□ 1.44
NCKAP1-201ENST00000360982 RANBP6O60518 1105 aaKnown RBP24.03■■□□□ 1.44
NCKAP1-201ENST00000360982 PRPF40BQ6NWY9 871 aaKnown RBP24.02■■□□□ 1.44
NCKAP1-201ENST00000360982 PIBF1Q8WXW3 757 aa24.02■■□□□ 1.44
NCKAP1-201ENST00000360982 CCDC152Q4G0S7 254 aa24.02■■□□□ 1.44
NCKAP1-201ENST00000360982 PUS7Q96PZ0 661 aaKnown RBP24.02■■□□□ 1.44
NCKAP1-201ENST00000360982 ZNF219Q9P2Y4 722 aaPredicted RBP24.02■■□□□ 1.44
NCKAP1-201ENST00000360982 RAPGEF6Q8TEU7 1601 aa24.02■■□□□ 1.44
NCKAP1-201ENST00000360982 CCDC96Q2M329 555 aa24.01■■□□□ 1.43
NCKAP1-201ENST00000360982 RAB34Q9BZG1 259 aa24.01■■□□□ 1.43
NCKAP1-201ENST00000360982 SH2B1Q9NRF2 756 aaPredicted RBP24.01■■□□□ 1.43
NCKAP1-201ENST00000360982 ZNF622Q969S3 477 aaKnown RBP eCLIP24.01■■□□□ 1.432e-7■■■□□ 18
NCKAP1-201ENST00000360982 DEF6Q9H4E7 631 aa24.01■■□□□ 1.43
NCKAP1-201ENST00000360982 ATP5J2-PTCD1G3V325 749 aa24■■□□□ 1.43
NCKAP1-201ENST00000360982 TTLL5Q6EMB2 1281 aa24■■□□□ 1.43
NCKAP1-201ENST00000360982 LRRC59Q96AG4 307 aaKnown RBP24■■□□□ 1.43
NCKAP1-201ENST00000360982 CCDC112Q8NEF3 446 aa24■■□□□ 1.43
NCKAP1-201ENST00000360982 CBFA2T2O43439 604 aa24■■□□□ 1.43
NCKAP1-201ENST00000360982 UQCRFS1P1P0C7P4 283 aa24■■□□□ 1.43
NCKAP1-201ENST00000360982 ERCC4Q92889 916 aaPredicted RBP24■■□□□ 1.43
NCKAP1-201ENST00000360982 CUL5Q93034 780 aa24■■□□□ 1.43
NCKAP1-201ENST00000360982 EVI5LQ96CN4 794 aa23.99■■□□□ 1.43
NCKAP1-201ENST00000360982 PHAXQ9H814 394 aaKnown RBP23.99■■□□□ 1.43
NCKAP1-201ENST00000360982 SMARCA5O60264 1052 aaPredicted RBP23.99■■□□□ 1.43
NCKAP1-201ENST00000360982 SPC24Q8NBT2 197 aa23.99■■□□□ 1.43
NCKAP1-201ENST00000360982 C8orf37Q96NL8 207 aa23.99■■□□□ 1.43
NCKAP1-201ENST00000360982 TRIM21P19474 475 aaKnown RBP23.99■■□□□ 1.43
NCKAP1-201ENST00000360982 DDX11Q96FC9 970 aa23.99■■□□□ 1.43
NCKAP1-201ENST00000360982 DESP17661 470 aa23.98■■□□□ 1.43
NCKAP1-201ENST00000360982 CABP5Q9NP86 173 aa23.98■■□□□ 1.43
NCKAP1-201ENST00000360982 MBIPQ9NS73 344 aa23.98■■□□□ 1.43
NCKAP1-201ENST00000360982 SETDB2Q96T68 719 aa23.98■■□□□ 1.43
NCKAP1-201ENST00000360982 PPP1R12BO60237 982 aaPredicted RBP23.98■■□□□ 1.43
NCKAP1-201ENST00000360982 HLA-DOAP06340 250 aa23.98■■□□□ 1.43
NCKAP1-201ENST00000360982 AKAP4Q5JQC9 854 aa23.98■■□□□ 1.43
NCKAP1-201ENST00000360982 EHMT1Q9H9B1 1298 aa23.98■■□□□ 1.43
NCKAP1-201ENST00000360982 SLC12A7Q9Y666 1083 aa23.98■■□□□ 1.43
NCKAP1-201ENST00000360982 TRIM27P14373 513 aa23.97■■□□□ 1.43
NCKAP1-201ENST00000360982 FEZ1Q99689 392 aa23.97■■□□□ 1.43
NCKAP1-201ENST00000360982 NLRP3Q96P20 1036 aa23.97■■□□□ 1.43
NCKAP1-201ENST00000360982 IL2RBP14784 551 aa23.97■■□□□ 1.43
NCKAP1-201ENST00000360982 NUP160Q12769 1436 aa23.97■■□□□ 1.43
NCKAP1-201ENST00000360982 PPIP5K1Q6PFW1 1433 aa23.97■■□□□ 1.43
NCKAP1-201ENST00000360982 MYO1BO43795 1136 aa23.96■■□□□ 1.43
NCKAP1-201ENST00000360982 WDR78Q5VTH9 848 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms