RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 KDM5AP29375 1690 aaKnown RBP5.72□□□□□ -1.49
SCN3A-202ENST00000360093 CAVIN1Q6NZI2 390 aaKnown RBP5.72□□□□□ -1.49
SCN3A-202ENST00000360093 ABCF2Q9UG63 623 aa5.72□□□□□ -1.49
SCN3A-202ENST00000360093 HMGN5P82970 282 aaKnown RBP5.71□□□□□ -1.49
SCN3A-202ENST00000360093 SYCP1Q15431 976 aa5.71□□□□□ -1.49
SCN3A-202ENST00000360093 TRIM5Q9C035 493 aa5.71□□□□□ -1.49
SCN3A-202ENST00000360093 MAP3K2Q9Y2U5 619 aa5.71□□□□□ -1.49
SCN3A-202ENST00000360093 PPP4R3BQ5MIZ7 849 aa5.71□□□□□ -1.49
SCN3A-202ENST00000360093 USHBP1Q8N6Y0 703 aa5.71□□□□□ -1.49
SCN3A-202ENST00000360093 NUP133Q8WUM0 1156 aa5.71□□□□□ -1.49
SCN3A-202ENST00000360093 ZNF592Q92610 1267 aa5.71□□□□□ -1.49
SCN3A-202ENST00000360093 SEC63Q9UGP8 760 aaKnown RBP5.71□□□□□ -1.49
SCN3A-202ENST00000360093 LRRFIP2Q9Y608 721 aaKnown RBP5.71□□□□□ -1.49
SCN3A-202ENST00000360093 USP5P45974 858 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 NAP1L1P55209 391 aaKnown RBP5.71□□□□□ -1.5
SCN3A-202ENST00000360093 TEX35Q5T0J7 233 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 DZIP1Q86YF9 867 aaKnown RBP5.71□□□□□ -1.5
SCN3A-202ENST00000360093 THUMPD2Q9BTF0 503 aaKnown RBP5.71□□□□□ -1.5
SCN3A-202ENST00000360093 MBIPQ9NS73 344 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 PPP1R1BQ9UD71 204 aaPredicted RBP5.71□□□□□ -1.5
SCN3A-202ENST00000360093 WDHD1O75717 1129 aaPredicted RBP5.71□□□□□ -1.5
SCN3A-202ENST00000360093 CASTP20810 708 aaKnown RBP5.71□□□□□ -1.5
SCN3A-202ENST00000360093 HMG20BQ9P0W2 317 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 MTMR7Q9Y216 660 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 FIBPO43427 364 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 UQCRFS1P1P0C7P4 283 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 ERCC4Q92889 916 aaPredicted RBP5.71□□□□□ -1.5
SCN3A-202ENST00000360093 AK7Q96M32 723 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 TNMDQ9H2S6 317 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 MKNK2Q9HBH9 465 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 ZFYVE16Q7Z3T8 1539 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 ZNF213O14771 459 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 HDAC1Q13547 482 aaPredicted RBP5.71□□□□□ -1.5
SCN3A-202ENST00000360093 BMP2KLQ5H9B9 411 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 DDX46Q7L014 1031 aaKnown RBP5.71□□□□□ -1.5
SCN3A-202ENST00000360093 FAM43AQ8N2R8 423 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 ZGPATQ8N5A5 531 aaKnown RBP5.71□□□□□ -1.5
SCN3A-202ENST00000360093 SPATA32Q96LK8 384 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 CDCA7Q9BWT1 371 aaPredicted RBP5.71□□□□□ -1.5
SCN3A-202ENST00000360093 BAG3O95817 575 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 MAP4K4O95819 1239 aaPredicted RBP5.71□□□□□ -1.5
SCN3A-202ENST00000360093 TNIP1Q15025 636 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 CCDC152Q4G0S7 254 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 SMTNL1A8MU46 457 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 ALDH1L1O75891 902 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 BICDL1Q6ZP65 573 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 ANKRD13DQ6ZTN6 518 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 MTERF4Q7Z6M4 381 aaKnown RBP5.71□□□□□ -1.5
SCN3A-202ENST00000360093 MNS1Q8NEH6 495 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 RUFY1Q96T51 708 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 RAB34Q9BZG1 259 aa5.71□□□□□ -1.5
SCN3A-202ENST00000360093 PZPP20742 1482 aa5.7□□□□□ -1.5
SCN3A-202ENST00000360093 ST5P78524 1137 aa5.7□□□□□ -1.5
SCN3A-202ENST00000360093 ECHDC1Q9NTX5 307 aa5.7□□□□□ -1.5
SCN3A-202ENST00000360093 EDC4Q6P2E9 1401 aaKnown RBP5.7□□□□□ -1.5
SCN3A-202ENST00000360093 SMC2O95347 1197 aa5.7□□□□□ -1.5
SCN3A-202ENST00000360093 NUTM1Q86Y26 1132 aa5.7□□□□□ -1.5
SCN3A-202ENST00000360093 ZFYP08048 801 aaPredicted RBP5.7□□□□□ -1.5
SCN3A-202ENST00000360093 CEP57L1Q8IYX8 460 aa5.7□□□□□ -1.5
SCN3A-202ENST00000360093 COL17A1Q9UMD9 1497 aaPredicted RBP5.7□□□□□ -1.5
SCN3A-202ENST00000360093 RFC4P35249 363 aa5.7□□□□□ -1.5
SCN3A-202ENST00000360093 GSTO1P78417 241 aa5.7□□□□□ -1.5
SCN3A-202ENST00000360093 CCDC178Q5BJE1 867 aa5.7□□□□□ -1.5
SCN3A-202ENST00000360093 CTCFLQ8NI51 663 aaPredicted RBP5.7□□□□□ -1.5
SCN3A-202ENST00000360093 LRRC59Q96AG4 307 aaKnown RBP5.7□□□□□ -1.5
SCN3A-202ENST00000360093 NYXQ9GZU5 481 aa5.7□□□□□ -1.5
SCN3A-202ENST00000360093 POLR3DP05423 398 aaPredicted RBP5.7□□□□□ -1.5
SCN3A-202ENST00000360093 ZNF444Q8N0Y2 327 aaPredicted RBP5.7□□□□□ -1.5
SCN3A-202ENST00000360093 PDILTQ8N807 584 aa5.7□□□□□ -1.5
SCN3A-202ENST00000360093 DNAI2Q9GZS0 605 aa5.7□□□□□ -1.5
SCN3A-202ENST00000360093 SCAND2PQ9GZW5 306 aaPredicted RBP5.7□□□□□ -1.5
SCN3A-202ENST00000360093 BOLA2Q9H3K6 86 aa5.7□□□□□ -1.5
SCN3A-202ENST00000360093 ATP2B1P20020 1258 aa5.7□□□□□ -1.5
SCN3A-202ENST00000360093 TMEM132AQ24JP5 1023 aa5.7□□□□□ -1.5
SCN3A-202ENST00000360093 PYM1Q9BRP8 204 aaKnown RBP5.7□□□□□ -1.5
SCN3A-202ENST00000360093 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.7□□□□□ -1.5
SCN3A-202ENST00000360093 STK3Q13188 491 aa5.7□□□□□ -1.5
SCN3A-202ENST00000360093 LDHAL6AQ6ZMR3 332 aa5.7□□□□□ -1.5
SCN3A-202ENST00000360093 CNKSR2Q8WXI2 1034 aa5.7□□□□□ -1.5
SCN3A-202ENST00000360093 EHMT1Q9H9B1 1298 aa5.7□□□□□ -1.5
SCN3A-202ENST00000360093 SHROOM2Q13796 1616 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 CCDC12Q8WUD4 166 aaPredicted RBP5.69□□□□□ -1.5
SCN3A-202ENST00000360093 CHD1O14646 1710 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 IL2RBP14784 551 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 TRIM21P19474 475 aaKnown RBP5.69□□□□□ -1.5
SCN3A-202ENST00000360093 TRAF1Q13077 416 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 ABCA8O94911 1581 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 MAGI2Q86UL8 1455 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 CRACR2BQ8N4Y2 399 aaPredicted RBP5.69□□□□□ -1.5
SCN3A-202ENST00000360093 PI4KAP2A4QPH2 592 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 SETQ01105 290 aaPredicted RBP5.69□□□□□ -1.5
SCN3A-202ENST00000360093 PPFIBP1Q86W92 1011 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 PI4KAP1Q8N8J0 262 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 MAP3K5Q99683 1374 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 SERPINC1P01008 464 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 ZNF76P36508 570 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 PDE4BQ07343 736 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 SIRT1Q96EB6 747 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 CTAGE5O15320 804 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 KIF5BP33176 963 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms