RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 RBM26Q5T8P6 1007 aaKnown RBP8.95□□□□□ -0.98
CCDC196-201ENST00000359454 BCL11AQ9H165 835 aa8.95□□□□□ -0.98
CCDC196-201ENST00000359454 ANKRD36BQ8N2N9 1353 aa8.95□□□□□ -0.98
CCDC196-201ENST00000359454 PRIM1P49642 420 aaKnown RBP8.94□□□□□ -0.98
CCDC196-201ENST00000359454 SYTL4Q96C24 671 aaPredicted RBP8.94□□□□□ -0.98
CCDC196-201ENST00000359454 LTV1Q96GA3 475 aaPredicted RBP8.94□□□□□ -0.98
CCDC196-201ENST00000359454 PUS7Q96PZ0 661 aaKnown RBP8.94□□□□□ -0.98
CCDC196-201ENST00000359454 SLC12A5Q9H2X9 1139 aa8.94□□□□□ -0.98
CCDC196-201ENST00000359454 FAM208AQ9UK61 1670 aaKnown RBP8.94□□□□□ -0.98
CCDC196-201ENST00000359454 PHF14O94880 888 aa8.93□□□□□ -0.98
CCDC196-201ENST00000359454 OSBPP22059 807 aa8.93□□□□□ -0.98
CCDC196-201ENST00000359454 KCNQ4P56696 695 aa8.93□□□□□ -0.98
CCDC196-201ENST00000359454 NLGN2Q8NFZ4 835 aa8.93□□□□□ -0.98
CCDC196-201ENST00000359454 CARD11Q9BXL7 1154 aa8.93□□□□□ -0.98
CCDC196-201ENST00000359454 A0A1W2PP64 1363 aa8.93□□□□□ -0.98
CCDC196-201ENST00000359454 KAT6BQ8WYB5 2073 aa8.92□□□□□ -0.98
CCDC196-201ENST00000359454 NSD2O96028 1365 aa8.92□□□□□ -0.98
CCDC196-201ENST00000359454 HMGB2P26583 209 aaKnown RBP8.92□□□□□ -0.98
CCDC196-201ENST00000359454 IFFO2Q5TF58 517 aa8.92□□□□□ -0.98
CCDC196-201ENST00000359454 GPIHBP1Q8IV16 184 aa8.92□□□□□ -0.98
CCDC196-201ENST00000359454 ZCRB1Q8TBF4 217 aaKnown RBP8.92□□□□□ -0.98
CCDC196-201ENST00000359454 CCNL1Q9UK58 526 aaPredicted RBP8.92□□□□□ -0.98
CCDC196-201ENST00000359454 LY75O60449 1722 aa8.91□□□□□ -0.98
CCDC196-201ENST00000359454 SHANK3Q9BYB0 1731 aa8.91□□□□□ -0.98
CCDC196-201ENST00000359454 USP47Q96K76 1375 aa8.91□□□□□ -0.98
CCDC196-201ENST00000359454 MAP3K19Q56UN5 1328 aa8.91□□□□□ -0.98
CCDC196-201ENST00000359454 HOXB1P14653 301 aaPredicted RBP8.91□□□□□ -0.98
CCDC196-201ENST00000359454 YBX3P16989 372 aaKnown RBP eCLIP8.91□□□□□ -0.98
CCDC196-201ENST00000359454 HOXC9P31274 260 aa8.91□□□□□ -0.98
CCDC196-201ENST00000359454 AMPHP49418 695 aa8.91□□□□□ -0.98
CCDC196-201ENST00000359454 COL23A1Q86Y22 540 aaPredicted RBP8.91□□□□□ -0.98
CCDC196-201ENST00000359454 COG3Q96JB2 828 aa8.91□□□□□ -0.98
CCDC196-201ENST00000359454 EPAS1Q99814 870 aa8.91□□□□□ -0.98
CCDC196-201ENST00000359454 TUBGCP6Q96RT7 1819 aa8.91□□□□□ -0.98
CCDC196-201ENST00000359454 DOT1LQ8TEK3 1739 aa8.91□□□□□ -0.98
CCDC196-201ENST00000359454 CGNL1Q0VF96 1302 aa8.9□□□□□ -0.98
CCDC196-201ENST00000359454 ZNF454Q8N9F8 522 aa8.9□□□□□ -0.98
CCDC196-201ENST00000359454 FLAD1Q8NFF5 587 aa8.9□□□□□ -0.98
CCDC196-201ENST00000359454 ZC3H15Q8WU90 426 aaKnown RBP8.9□□□□□ -0.98
CCDC196-201ENST00000359454 PCDHGA10Q9Y5H3 936 aa8.9□□□□□ -0.98
CCDC196-201ENST00000359454 CD2APQ9Y5K6 639 aa8.9□□□□□ -0.98
CCDC196-201ENST00000359454 MEGF6O75095 1541 aa8.9□□□□□ -0.99
CCDC196-201ENST00000359454 RTL1A6NKG5 1358 aa8.89□□□□□ -0.99
CCDC196-201ENST00000359454 FOSBP53539 338 aa8.89□□□□□ -0.99
CCDC196-201ENST00000359454 TYW1BQ6NUM6 668 aa8.89□□□□□ -0.99
CCDC196-201ENST00000359454 LHX6Q9UPM6 363 aa8.89□□□□□ -0.99
CCDC196-201ENST00000359454 ATP10DQ9P241 1426 aa8.88□□□□□ -0.99
CCDC196-201ENST00000359454 MSL1Q68DK7 614 aa8.88□□□□□ -0.99
CCDC196-201ENST00000359454 RAPGEF4Q8WZA2 1011 aa8.88□□□□□ -0.99
CCDC196-201ENST00000359454 POTEMA6NI47 508 aa8.87□□□□□ -0.99
CCDC196-201ENST00000359454 MAP3K7O43318 606 aa8.87□□□□□ -0.99
CCDC196-201ENST00000359454 TATP17735 454 aaPredicted RBP8.87□□□□□ -0.99
CCDC196-201ENST00000359454 FBLN1P23142 703 aa8.87□□□□□ -0.99
CCDC196-201ENST00000359454 NBPF6Q5VWK0 638 aa8.87□□□□□ -0.99
CCDC196-201ENST00000359454 FBXW7Q969H0 707 aa8.87□□□□□ -0.99
CCDC196-201ENST00000359454 NBPF4Q96M43 638 aa8.87□□□□□ -0.99
CCDC196-201ENST00000359454 GPBP1L1Q9HC44 474 aaPredicted RBP8.87□□□□□ -0.99
CCDC196-201ENST00000359454 SMG6Q86US8 1419 aaKnown RBP8.87□□□□□ -0.99
CCDC196-201ENST00000359454 PCDH11XQ9BZA7 1347 aa8.86□□□□□ -0.99
CCDC196-201ENST00000359454 PCDH11YQ9BZA8 1340 aa8.86□□□□□ -0.99
CCDC196-201ENST00000359454 ZDHHC16Q969W1 377 aa8.86□□□□□ -0.99
CCDC196-201ENST00000359454 RGPD2P0DJD1 1756 aa8.86□□□□□ -0.99
CCDC196-201ENST00000359454 PALLDQ8WX93 1383 aa8.86□□□□□ -0.99
CCDC196-201ENST00000359454 C5P01031 1676 aa8.85□□□□□ -0.99
CCDC196-201ENST00000359454 HSPA6P17066 643 aa8.85□□□□□ -0.99
CCDC196-201ENST00000359454 RRS1Q15050 365 aaKnown RBP8.85□□□□□ -0.99
CCDC196-201ENST00000359454 PPP4R3BQ5MIZ7 849 aa8.85□□□□□ -0.99
CCDC196-201ENST00000359454 MPRIPQ6WCQ1 1025 aa8.85□□□□□ -0.99
CCDC196-201ENST00000359454 USHBP1Q8N6Y0 703 aa8.85□□□□□ -0.99
CCDC196-201ENST00000359454 SMARCC1Q92922 1105 aaPredicted RBP8.85□□□□□ -0.99
CCDC196-201ENST00000359454 TESK2Q96S53 571 aa8.85□□□□□ -0.99
CCDC196-201ENST00000359454 ADCY9O60503 1353 aa8.85□□□□□ -0.99
CCDC196-201ENST00000359454 INSRP06213 1382 aa8.85□□□□□ -0.99
CCDC196-201ENST00000359454 TONSLQ96HA7 1378 aa8.85□□□□□ -0.99
CCDC196-201ENST00000359454 ST20-MTHFSA0A0A6YYL1 179 aa8.84□□□□□ -0.99
CCDC196-201ENST00000359454 FYB1O15117 783 aa8.84□□□□□ -0.99
CCDC196-201ENST00000359454 ST18O60284 1047 aa8.84□□□□□ -0.99
CCDC196-201ENST00000359454 AK7Q96M32 723 aa8.84□□□□□ -0.99
CCDC196-201ENST00000359454 NSD3Q9BZ95 1437 aa8.84□□□□□ -0.99
CCDC196-201ENST00000359454 PCDH10Q9P2E7 1040 aa8.84□□□□□ -0.99
CCDC196-201ENST00000359454 KIF24Q5T7B8 1368 aa8.84□□□□□ -0.99
CCDC196-201ENST00000359454 ZMYND10O75800 440 aa8.83□□□□□ -1
CCDC196-201ENST00000359454 ZNF526Q8TF50 670 aaPredicted RBP8.83□□□□□ -1
CCDC196-201ENST00000359454 FAM163AQ96GL9 167 aaPredicted RBP8.83□□□□□ -1
CCDC196-201ENST00000359454 GGNBP2Q9H3C7 697 aa8.83□□□□□ -1
CCDC196-201ENST00000359454 C4BP0C0L5 1744 aa8.83□□□□□ -1
CCDC196-201ENST00000359454 IGSF1Q8N6C5 1336 aa8.82□□□□□ -1
CCDC196-201ENST00000359454 TAF1LQ8IZX4 1826 aa8.82□□□□□ -1
CCDC196-201ENST00000359454 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.82□□□□□ -1
CCDC196-201ENST00000359454 GPR37O15354 613 aa8.82□□□□□ -1
CCDC196-201ENST00000359454 CYP27B1O15528 508 aa8.82□□□□□ -1
CCDC196-201ENST00000359454 FCHSD2O94868 740 aa8.82□□□□□ -1
CCDC196-201ENST00000359454 SSFA2P28290 1259 aa8.82□□□□□ -1
CCDC196-201ENST00000359454 HSP90AB2PQ58FF8 381 aa8.82□□□□□ -1
CCDC196-201ENST00000359454 CDHR5Q9HBB8 845 aa8.82□□□□□ -1
CCDC196-201ENST00000359454 FLT4P35916 1363 aa8.82□□□□□ -1
CCDC196-201ENST00000359454 TMF1P82094 1093 aa8.81□□□□□ -1
CCDC196-201ENST00000359454 TSR1Q2NL82 804 aaKnown RBP8.81□□□□□ -1
CCDC196-201ENST00000359454 PIGBQ92521 554 aa8.81□□□□□ -1
CCDC196-201ENST00000359454 ADAM33Q9BZ11 813 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms