RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 ZNF790Q6PG37 636 aa17.06■□□□□ 0.32
CCDC197-201ENST00000359253 EP400Q96L91 3159 aa17.05■□□□□ 0.32
CCDC197-201ENST00000359253 ZBTB7BO15156 539 aaPredicted RBP17.05■□□□□ 0.32
CCDC197-201ENST00000359253 GIGYF1O75420 1035 aaPredicted RBP17.05■□□□□ 0.32
CCDC197-201ENST00000359253 CCT4P50991 539 aaKnown RBP17.05■□□□□ 0.32
CCDC197-201ENST00000359253 CABP4P57796 275 aa17.05■□□□□ 0.32
CCDC197-201ENST00000359253 HDAC1Q13547 482 aaPredicted RBP17.05■□□□□ 0.32
CCDC197-201ENST00000359253 APBA3O96018 575 aa17.04■□□□□ 0.32
CCDC197-201ENST00000359253 NFATC2IPQ8NCF5 419 aa17.04■□□□□ 0.32
CCDC197-201ENST00000359253 HMGB2P26583 209 aaKnown RBP17.03■□□□□ 0.32
CCDC197-201ENST00000359253 FLIIQ13045 1269 aa17.03■□□□□ 0.32
CCDC197-201ENST00000359253 TTC5Q8N0Z6 440 aa17.03■□□□□ 0.32
CCDC197-201ENST00000359253 DBF4Q9UBU7 674 aaPredicted RBP17.03■□□□□ 0.32
CCDC197-201ENST00000359253 PXDNLA1KZ92 1463 aa17.02■□□□□ 0.32
CCDC197-201ENST00000359253 PCDHB15Q9Y5E8 787 aa17.02■□□□□ 0.32
CCDC197-201ENST00000359253 PRIM1P49642 420 aaKnown RBP17.01■□□□□ 0.31
CCDC197-201ENST00000359253 FMNL2Q96PY5 1086 aa17.01■□□□□ 0.31
CCDC197-201ENST00000359253 KCNQ3O43525 872 aa17■□□□□ 0.31
CCDC197-201ENST00000359253 KCNQ2O43526 872 aa17■□□□□ 0.31
CCDC197-201ENST00000359253 SNRPA1P09661 255 aaKnown RBP17■□□□□ 0.31
CCDC197-201ENST00000359253 CAMKK2Q96RR4 588 aa17■□□□□ 0.31
CCDC197-201ENST00000359253 HYPKQ9NX55 129 aa17■□□□□ 0.31
CCDC197-201ENST00000359253 IGHDP01880 384 aa16.99■□□□□ 0.31
CCDC197-201ENST00000359253 FKBP5Q13451 457 aaPredicted RBP16.99■□□□□ 0.31
CCDC197-201ENST00000359253 ACSBG1Q96GR2 724 aa16.99■□□□□ 0.31
CCDC197-201ENST00000359253 EIF2S2P20042 333 aaKnown RBP16.98■□□□□ 0.31
CCDC197-201ENST00000359253 EN1Q05925 392 aaPredicted RBP16.98■□□□□ 0.31
CCDC197-201ENST00000359253 G2E3Q7L622 706 aa16.98■□□□□ 0.31
CCDC197-201ENST00000359253 DEFB132Q7Z7B7 95 aa16.98■□□□□ 0.31
CCDC197-201ENST00000359253 SHANK3Q9BYB0 1731 aa16.98■□□□□ 0.31
CCDC197-201ENST00000359253 ERBB4Q15303 1308 aa16.97■□□□□ 0.31
CCDC197-201ENST00000359253 RPAP2Q8IXW5 612 aaPredicted RBP16.97■□□□□ 0.31
CCDC197-201ENST00000359253 DDX21Q9NR30 783 aaKnown RBP eCLIP16.97■□□□□ 0.31
CCDC197-201ENST00000359253 SBF2Q86WG5 1849 aa16.97■□□□□ 0.31
CCDC197-201ENST00000359253 DDX58O95786 925 aaKnown RBP16.96■□□□□ 0.31
CCDC197-201ENST00000359253 GNAI3P08754 354 aa16.96■□□□□ 0.31
CCDC197-201ENST00000359253 SYTL4Q96C24 671 aaPredicted RBP16.96■□□□□ 0.31
CCDC197-201ENST00000359253 CHPF2Q9P2E5 772 aa16.96■□□□□ 0.31
CCDC197-201ENST00000359253 IBTKQ9P2D0 1353 aaPredicted RBP16.95■□□□□ 0.3
CCDC197-201ENST00000359253 SLC39A6Q13433 755 aa16.95■□□□□ 0.3
CCDC197-201ENST00000359253 PTF1AQ7RTS3 328 aa16.95■□□□□ 0.3
CCDC197-201ENST00000359253 SMC5Q8IY18 1101 aa16.95■□□□□ 0.3
CCDC197-201ENST00000359253 SMARCC1Q92922 1105 aaPredicted RBP16.95■□□□□ 0.3
CCDC197-201ENST00000359253 GCC1Q96CN9 775 aa16.95■□□□□ 0.3
CCDC197-201ENST00000359253 ZNF496Q96IT1 587 aaPredicted RBP16.95■□□□□ 0.3
CCDC197-201ENST00000359253 TSHZ2Q9NRE2 1034 aa16.95■□□□□ 0.3
CCDC197-201ENST00000359253 TMOD3Q9NYL9 352 aa16.95■□□□□ 0.3
CCDC197-201ENST00000359253 HDAC5Q9UQL6 1122 aa16.95■□□□□ 0.3
CCDC197-201ENST00000359253 EZH2Q15910 746 aaKnown RBP16.94■□□□□ 0.3
CCDC197-201ENST00000359253 SLC27A3Q5K4L6 730 aa16.94■□□□□ 0.3
CCDC197-201ENST00000359253 PIGBQ92521 554 aa16.94■□□□□ 0.3
CCDC197-201ENST00000359253 NECTIN2Q92692 538 aa16.94■□□□□ 0.3
CCDC197-201ENST00000359253 TEX13AQ9BXU3 409 aaPredicted RBP16.94■□□□□ 0.3
CCDC197-201ENST00000359253 KAT6BQ8WYB5 2073 aa16.93■□□□□ 0.3
CCDC197-201ENST00000359253 N4BP2Q86UW6 1770 aaPredicted RBP16.93■□□□□ 0.3
CCDC197-201ENST00000359253 SLC4A10Q6U841 1118 aa16.93■□□□□ 0.3
CCDC197-201ENST00000359253 VSIG10Q8N0Z9 540 aa16.93■□□□□ 0.3
CCDC197-201ENST00000359253 ATP10DQ9P241 1426 aa16.93■□□□□ 0.3
CCDC197-201ENST00000359253 NHSQ6T4R5 1651 aa16.92■□□□□ 0.3
CCDC197-201ENST00000359253 KSR2Q6VAB6 950 aa16.92■□□□□ 0.3
CCDC197-201ENST00000359253 PROM2Q8N271 834 aa16.92■□□□□ 0.3
CCDC197-201ENST00000359253 DNAAF4Q8WXU2 420 aa16.92■□□□□ 0.3
CCDC197-201ENST00000359253 PHAXQ9H814 394 aaKnown RBP16.92■□□□□ 0.3
CCDC197-201ENST00000359253 PAPPAQ13219 1627 aa16.92■□□□□ 0.3
CCDC197-201ENST00000359253 TXNRD1Q16881 649 aa16.91■□□□□ 0.3
CCDC197-201ENST00000359253 NBPF14Q5TI25 921 aa16.91■□□□□ 0.3
CCDC197-201ENST00000359253 ANKRD44Q8N8A2 993 aa16.91■□□□□ 0.3
CCDC197-201ENST00000359253 SRCIN1Q9C0H9 1055 aa16.91■□□□□ 0.3
CCDC197-201ENST00000359253 TNS1Q9HBL0 1735 aaKnown RBP16.9■□□□□ 0.3
CCDC197-201ENST00000359253 UBR2Q8IWV8 1755 aa16.9■□□□□ 0.3
CCDC197-201ENST00000359253 F6X3S4 739 aa16.9■□□□□ 0.3
CCDC197-201ENST00000359253 HMMRO75330 724 aa16.9■□□□□ 0.3
CCDC197-201ENST00000359253 ALDH1L1O75891 902 aa16.9■□□□□ 0.3
CCDC197-201ENST00000359253 GNAI2P04899 355 aa16.9■□□□□ 0.3
CCDC197-201ENST00000359253 PDIA6Q15084 440 aa16.89■□□□□ 0.29
CCDC197-201ENST00000359253 LAMB4A4D0S4 1761 aa16.89■□□□□ 0.29
CCDC197-201ENST00000359253 PI4KAP2A4QPH2 592 aa16.88■□□□□ 0.29
CCDC197-201ENST00000359253 PI4KAP1Q8N8J0 262 aa16.88■□□□□ 0.29
CCDC197-201ENST00000359253 PDZRN3Q9UPQ7 1066 aa16.88■□□□□ 0.29
CCDC197-201ENST00000359253 RGPD3A6NKT7 1758 aaPredicted RBP16.87■□□□□ 0.29
CCDC197-201ENST00000359253 RGPD4Q7Z3J3 1758 aa16.87■□□□□ 0.29
CCDC197-201ENST00000359253 KCPQ6ZWJ8 1503 aa16.87■□□□□ 0.29
CCDC197-201ENST00000359253 BEND3Q5T5X7 828 aa16.87■□□□□ 0.29
CCDC197-201ENST00000359253 MEIS3Q99687 375 aa16.87■□□□□ 0.29
CCDC197-201ENST00000359253 ATG3Q9NT62 314 aa16.87■□□□□ 0.29
CCDC197-201ENST00000359253 USP16Q9Y5T5 823 aa16.87■□□□□ 0.29
CCDC197-201ENST00000359253 C5P01031 1676 aa16.86■□□□□ 0.29
CCDC197-201ENST00000359253 PRAMEF22A3QJZ6 481 aa16.86■□□□□ 0.29
CCDC197-201ENST00000359253 NUCB1Q02818 461 aa16.86■□□□□ 0.29
CCDC197-201ENST00000359253 CEP85Q6P2H3 762 aa16.86■□□□□ 0.29
CCDC197-201ENST00000359253 LINS1Q8NG48 757 aa16.86■□□□□ 0.29
CCDC197-201ENST00000359253 DCTPP1Q9H773 170 aa16.86■□□□□ 0.29
CCDC197-201ENST00000359253 TOGARAM1Q9Y4F4 1720 aa16.86■□□□□ 0.29
CCDC197-201ENST00000359253 ADCY9O60503 1353 aa16.86■□□□□ 0.29
CCDC197-201ENST00000359253 UBTFL1P0CB47 393 aaPredicted RBP16.85■□□□□ 0.29
CCDC197-201ENST00000359253 NEXNQ0ZGT2 675 aa16.85■□□□□ 0.29
CCDC197-201ENST00000359253 ASAP1Q9ULH1 1129 aa16.85■□□□□ 0.29
CCDC197-201ENST00000359253 MAP3K2Q9Y2U5 619 aa16.85■□□□□ 0.29
CCDC197-201ENST00000359253 DOT1LQ8TEK3 1739 aa16.84■□□□□ 0.29
CCDC197-201ENST00000359253 BTAF1O14981 1849 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms