RNA–Protein interactions for RNA: ENST00000359062.3

PDE3A-201, Transcript of phosphodiesterase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE3A, Length 7,576 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3A-201ENST00000359062 ZPR1O75312 459 aa17.99■□□□□ 0.47
PDE3A-201ENST00000359062 MCM3P25205 808 aa17.99■□□□□ 0.47
PDE3A-201ENST00000359062 THEMISQ8N1K5 641 aaPredicted RBP17.99■□□□□ 0.47
PDE3A-201ENST00000359062 CEP63Q96MT8 703 aa17.99■□□□□ 0.47
PDE3A-201ENST00000359062 SLC12A7Q9Y666 1083 aa17.99■□□□□ 0.47
PDE3A-201ENST00000359062 FGFR1OPO95684 399 aaKnown RBP17.99■□□□□ 0.47
PDE3A-201ENST00000359062 CCT2P78371 535 aaKnown RBP17.99■□□□□ 0.47
PDE3A-201ENST00000359062 GCOM1H8Y6P7 765 aaPredicted RBP17.98■□□□□ 0.47
PDE3A-201ENST00000359062 MYZAPP0CAP1 466 aa17.98■□□□□ 0.47
PDE3A-201ENST00000359062 CCDC144CPQ8IYA2 1237 aa17.98■□□□□ 0.47
PDE3A-201ENST00000359062 CNNM3Q8NE01 707 aa17.98■□□□□ 0.47
PDE3A-201ENST00000359062 ZNF652Q9Y2D9 606 aa17.98■□□□□ 0.47
PDE3A-201ENST00000359062 IGF1RP08069 1367 aa17.98■□□□□ 0.47
PDE3A-201ENST00000359062 TDRD12Q587J7 1177 aaKnown RBP17.98■□□□□ 0.47
PDE3A-201ENST00000359062 ZSCAN30Q86W11 494 aa17.98■□□□□ 0.47
PDE3A-201ENST00000359062 CKAP2LQ8IYA6 745 aa17.98■□□□□ 0.47
PDE3A-201ENST00000359062 ZNF444Q8N0Y2 327 aaPredicted RBP17.98■□□□□ 0.47
PDE3A-201ENST00000359062 THUMPD2Q9BTF0 503 aaKnown RBP17.98■□□□□ 0.47
PDE3A-201ENST00000359062 PSMD1Q99460 953 aa17.97■□□□□ 0.47
PDE3A-201ENST00000359062 PDIA4P13667 645 aaKnown RBP17.97■□□□□ 0.47
PDE3A-201ENST00000359062 ZNF213O14771 459 aa17.97■□□□□ 0.47
PDE3A-201ENST00000359062 GLRX3O76003 335 aaKnown RBP17.97■□□□□ 0.47
PDE3A-201ENST00000359062 RPAP2Q8IXW5 612 aaPredicted RBP17.97■□□□□ 0.47
PDE3A-201ENST00000359062 CTNNA2P26232 953 aa17.97■□□□□ 0.47
PDE3A-201ENST00000359062 CUL5Q93034 780 aa17.97■□□□□ 0.47
PDE3A-201ENST00000359062 NLRP5P59047 1200 aa17.96■□□□□ 0.47
PDE3A-201ENST00000359062 TMEM266Q2M3C6 531 aa17.96■□□□□ 0.47
PDE3A-201ENST00000359062 ISM2Q6H9L7 571 aa17.96■□□□□ 0.47
PDE3A-201ENST00000359062 SLC4A8Q2Y0W8 1093 aa17.96■□□□□ 0.47
PDE3A-201ENST00000359062 FCHSD2O94868 740 aa17.96■□□□□ 0.47
PDE3A-201ENST00000359062 TRMT1LQ7Z2T5 733 aaKnown RBP17.96■□□□□ 0.47
PDE3A-201ENST00000359062 HOOK3Q86VS8 718 aa17.96■□□□□ 0.47
PDE3A-201ENST00000359062 FERMT2Q96AC1 680 aa17.96■□□□□ 0.47
PDE3A-201ENST00000359062 CCDC196A0A1B0GTZ2 297 aa17.96■□□□□ 0.47
PDE3A-201ENST00000359062 KIF2AO00139 706 aaPredicted RBP17.96■□□□□ 0.47
PDE3A-201ENST00000359062 USO1O60763 962 aaKnown RBP17.96■□□□□ 0.47
PDE3A-201ENST00000359062 CCDC8Q9H0W5 538 aaPredicted RBP17.96■□□□□ 0.47
PDE3A-201ENST00000359062 C16orf45Q96MC5 204 aaPredicted RBP17.96■□□□□ 0.47
PDE3A-201ENST00000359062 HFM1A2PYH4 1435 aa17.95■□□□□ 0.46
PDE3A-201ENST00000359062 CTCFLQ8NI51 663 aaPredicted RBP17.95■□□□□ 0.46
PDE3A-201ENST00000359062 TMOD3Q9NYL9 352 aa17.95■□□□□ 0.46
PDE3A-201ENST00000359062 WDR78Q5VTH9 848 aa17.94■□□□□ 0.46
PDE3A-201ENST00000359062 SPTY2D1Q68D10 685 aaPredicted RBP17.94■□□□□ 0.46
PDE3A-201ENST00000359062 USHBP1Q8N6Y0 703 aa17.94■□□□□ 0.46
PDE3A-201ENST00000359062 GOLGA8BA8MQT2 603 aa17.94■□□□□ 0.46
PDE3A-201ENST00000359062 PAFAH1B1P43034 410 aa17.94■□□□□ 0.46
PDE3A-201ENST00000359062 HLTFQ14527 1009 aaKnown RBP eCLIP17.94■□□□□ 0.46
PDE3A-201ENST00000359062 RAB34Q9BZG1 259 aa17.94■□□□□ 0.46
PDE3A-201ENST00000359062 PRPF4BQ13523 1007 aaKnown RBP17.94■□□□□ 0.46
PDE3A-201ENST00000359062 NBPF8Q3BBV2 869 aa17.94■□□□□ 0.46
PDE3A-201ENST00000359062 IQCA1Q86XH1 822 aa17.94■□□□□ 0.46
PDE3A-201ENST00000359062 SLFN5Q08AF3 891 aa17.94■□□□□ 0.46
PDE3A-201ENST00000359062 PHAXQ9H814 394 aaKnown RBP17.94■□□□□ 0.46
PDE3A-201ENST00000359062 CCDC184Q52MB2 194 aa17.94■□□□□ 0.46
PDE3A-201ENST00000359062 BIN1O00499 593 aa17.94■□□□□ 0.46
PDE3A-201ENST00000359062 TMCO5BA8MYB1 307 aa17.93■□□□□ 0.46
PDE3A-201ENST00000359062 MAP3K12Q12852 859 aa17.93■□□□□ 0.46
PDE3A-201ENST00000359062 CGNQ9P2M7 1197 aaKnown RBP17.93■□□□□ 0.46
PDE3A-201ENST00000359062 SPDYE4A6NLX3 237 aa17.93■□□□□ 0.46
PDE3A-201ENST00000359062 IFIT3O14879 490 aaKnown RBP17.93■□□□□ 0.46
PDE3A-201ENST00000359062 SPECC1Q5M775 1068 aa17.93■□□□□ 0.46
PDE3A-201ENST00000359062 TMC6Q7Z403 805 aa17.93■□□□□ 0.46
PDE3A-201ENST00000359062 SCAND2PQ9GZW5 306 aaPredicted RBP17.93■□□□□ 0.46
PDE3A-201ENST00000359062 MTIF2P46199 727 aaKnown RBP17.93■□□□□ 0.46
PDE3A-201ENST00000359062 IFIT5Q13325 482 aaKnown RBP17.93■□□□□ 0.46
PDE3A-201ENST00000359062 TTLL12Q14166 644 aaPredicted RBP17.93■□□□□ 0.46
PDE3A-201ENST00000359062 CATIPQ7Z7H3 387 aa17.93■□□□□ 0.46
PDE3A-201ENST00000359062 FSIP1Q8NA03 581 aa17.93■□□□□ 0.46
PDE3A-201ENST00000359062 A0A087WZG4 1122 aa17.92■□□□□ 0.46
PDE3A-201ENST00000359062 YEATS4O95619 227 aa17.92■□□□□ 0.46
PDE3A-201ENST00000359062 SLC5A1P13866 664 aa17.92■□□□□ 0.46
PDE3A-201ENST00000359062 TRERF1Q96PN7 1200 aa17.92■□□□□ 0.46
PDE3A-201ENST00000359062 COMMD10Q9Y6G5 202 aa17.92■□□□□ 0.46
PDE3A-201ENST00000359062 HMGB1P09429 215 aaKnown RBP17.92■□□□□ 0.46
PDE3A-201ENST00000359062 CTR9Q6PD62 1173 aa17.92■□□□□ 0.46
PDE3A-201ENST00000359062 SH2B1Q9NRF2 756 aaPredicted RBP17.92■□□□□ 0.46
PDE3A-201ENST00000359062 SKAP1Q86WV1 359 aa17.92■□□□□ 0.46
PDE3A-201ENST00000359062 NKTRP30414 1462 aaKnown RBP17.91■□□□□ 0.46
PDE3A-201ENST00000359062 PLEKHH1Q9ULM0 1364 aa17.91■□□□□ 0.46
PDE3A-201ENST00000359062 NOP2P46087 812 aaKnown RBP17.91■□□□□ 0.46
PDE3A-201ENST00000359062 GOLGA8AA7E2F4 631 aa17.91■□□□□ 0.46
PDE3A-201ENST00000359062 F6X3S4 739 aa17.91■□□□□ 0.46
PDE3A-201ENST00000359062 SSFA2P28290 1259 aa17.91■□□□□ 0.46
PDE3A-201ENST00000359062 CTAGE5O15320 804 aa17.91■□□□□ 0.46
PDE3A-201ENST00000359062 TAOK3Q9H2K8 898 aa17.91■□□□□ 0.46
PDE3A-201ENST00000359062 USP25Q9UHP3 1055 aa17.91■□□□□ 0.46
PDE3A-201ENST00000359062 GDPD2Q9HCC8 539 aa17.91■□□□□ 0.46
PDE3A-201ENST00000359062 VAT1LQ9HCJ6 419 aa17.91■□□□□ 0.46
PDE3A-201ENST00000359062 MPRIPQ6WCQ1 1025 aa17.91■□□□□ 0.46
PDE3A-201ENST00000359062 ANKLE2Q86XL3 938 aa17.9■□□□□ 0.46
PDE3A-201ENST00000359062 RPGRQ92834 1020 aaKnown RBP17.9■□□□□ 0.46
PDE3A-201ENST00000359062 NUDT16Q96DE0 195 aaKnown RBP17.9■□□□□ 0.46
PDE3A-201ENST00000359062 ALS2CR12Q96Q35 445 aa17.9■□□□□ 0.46
PDE3A-201ENST00000359062 MMRN2Q9H8L6 949 aa17.9■□□□□ 0.46
PDE3A-201ENST00000359062 CCDC194A0A1B0GVG4 234 aa17.9■□□□□ 0.46
PDE3A-201ENST00000359062 GJB2P29033 226 aa17.9■□□□□ 0.46
PDE3A-201ENST00000359062 TCERG1LQ5VWI1 586 aa17.9■□□□□ 0.46
PDE3A-201ENST00000359062 MICALCLQ6ZW33 695 aa17.9■□□□□ 0.46
PDE3A-201ENST00000359062 PUF60Q9UHX1 559 aaKnown RBP17.9■□□□□ 0.46
PDE3A-201ENST00000359062 ATAD2Q6PL18 1390 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms