RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 RIOK3O14730 519 aaKnown RBP17.3■□□□□ 0.36
APP-205ENST00000358918 ANKRD7Q92527 254 aa17.3■□□□□ 0.36
APP-205ENST00000358918 RGPD8O14715 1765 aaPredicted RBP17.3■□□□□ 0.36
APP-205ENST00000358918 MSH6P52701 1360 aa17.3■□□□□ 0.36
APP-205ENST00000358918 KIAA1524Q8TCG1 905 aa17.3■□□□□ 0.36
APP-205ENST00000358918 SSH2Q76I76 1423 aa17.3■□□□□ 0.36
APP-205ENST00000358918 HAP1P54257 671 aaPredicted RBP17.29■□□□□ 0.36
APP-205ENST00000358918 EIF4A2Q14240 407 aaKnown RBP17.29■□□□□ 0.36
APP-205ENST00000358918 RBM33Q96EV2 1170 aaKnown RBP17.29■□□□□ 0.36
APP-205ENST00000358918 PALD1Q9ULE6 856 aa17.29■□□□□ 0.36
APP-205ENST00000358918 PLCB2Q00722 1185 aa17.29■□□□□ 0.36
APP-205ENST00000358918 U2AF2P26368 475 aaKnown RBP eCLIP17.28■□□□□ 0.36
APP-205ENST00000358918 FGD1P98174 961 aa17.28■□□□□ 0.36
APP-205ENST00000358918 SRCIN1Q9C0H9 1055 aa17.28■□□□□ 0.36
APP-205ENST00000358918 ANO2Q9NQ90 1003 aa17.28■□□□□ 0.36
APP-205ENST00000358918 GOLGA6L6A8MZA4 724 aa17.28■□□□□ 0.36
APP-205ENST00000358918 UBE2HP62256 183 aa17.28■□□□□ 0.36
APP-205ENST00000358918 HSP90AB2PQ58FF8 381 aa17.28■□□□□ 0.36
APP-205ENST00000358918 MEIS3Q99687 375 aa17.28■□□□□ 0.36
APP-205ENST00000358918 FEZ1Q99689 392 aa17.28■□□□□ 0.36
APP-205ENST00000358918 TAF3Q5VWG9 929 aa17.27■□□□□ 0.36
APP-205ENST00000358918 AEBP1Q8IUX7 1158 aa17.27■□□□□ 0.36
APP-205ENST00000358918 KLHL34Q8N239 644 aa17.27■□□□□ 0.36
APP-205ENST00000358918 TTC21AQ8NDW8 1320 aa17.27■□□□□ 0.36
APP-205ENST00000358918 RPAP1Q9BWH6 1393 aaPredicted RBP17.27■□□□□ 0.35
APP-205ENST00000358918 CTIFO43310 598 aaKnown RBP17.26■□□□□ 0.35
APP-205ENST00000358918 SULT6B1Q6IMI4 303 aa17.26■□□□□ 0.35
APP-205ENST00000358918 PYCARDQ9ULZ3 195 aa17.26■□□□□ 0.35
APP-205ENST00000358918 CNPY2Q9Y2B0 182 aa17.26■□□□□ 0.35
APP-205ENST00000358918 USP31Q70CQ4 1352 aa17.26■□□□□ 0.35
APP-205ENST00000358918 UPF3BQ9BZI7 483 aaKnown RBP17.25■□□□□ 0.35
APP-205ENST00000358918 KCNF1Q9H3M0 494 aa17.25■□□□□ 0.35
APP-205ENST00000358918 PTPRCP08575 1304 aa17.25■□□□□ 0.35
APP-205ENST00000358918 ADAMTSL3P82987 1691 aa17.25■□□□□ 0.35
APP-205ENST00000358918 TPRNQ4KMQ1 711 aa17.25■□□□□ 0.35
APP-205ENST00000358918 KRT24Q2M2I5 525 aa17.24■□□□□ 0.35
APP-205ENST00000358918 IL17RAQ96F46 866 aa17.24■□□□□ 0.35
APP-205ENST00000358918 OGFRQ9NZT2 677 aa17.24■□□□□ 0.35
APP-205ENST00000358918 MAP3K19Q56UN5 1328 aa17.24■□□□□ 0.35
APP-205ENST00000358918 FAM83GA6ND36 823 aa17.24■□□□□ 0.35
APP-205ENST00000358918 CHMLP26374 656 aa17.24■□□□□ 0.35
APP-205ENST00000358918 NUTM2GQ5VZR2 741 aa17.24■□□□□ 0.35
APP-205ENST00000358918 NALCNQ8IZF0 1738 aa17.23■□□□□ 0.35
APP-205ENST00000358918 PEAK1Q9H792 1746 aa17.23■□□□□ 0.35
APP-205ENST00000358918 ZSCAN22P10073 491 aaPredicted RBP17.23■□□□□ 0.35
APP-205ENST00000358918 ANKARQ7Z5J8 1434 aa17.23■□□□□ 0.35
APP-205ENST00000358918 NLRP6P59044 892 aa17.23■□□□□ 0.35
APP-205ENST00000358918 DCTN1Q14203 1278 aa17.23■□□□□ 0.35
APP-205ENST00000358918 ZNF771Q7L3S4 317 aaPredicted RBP17.23■□□□□ 0.35
APP-205ENST00000358918 SPC24Q8NBT2 197 aa17.23■□□□□ 0.35
APP-205ENST00000358918 FUCA2Q9BTY2 467 aa17.23■□□□□ 0.35
APP-205ENST00000358918 TRIM6-TRIM34B2RNG4 842 aa17.22■□□□□ 0.35
APP-205ENST00000358918 TSHZ3Q63HK5 1081 aa17.22■□□□□ 0.35
APP-205ENST00000358918 RILPL2Q969X0 211 aa17.22■□□□□ 0.35
APP-205ENST00000358918 ATP6V1DQ9Y5K8 247 aa17.22■□□□□ 0.35
APP-205ENST00000358918 ZNF142P52746 1687 aaPredicted RBP17.22■□□□□ 0.35
APP-205ENST00000358918 GIMAP6Q6P9H5 292 aa17.22■□□□□ 0.35
APP-205ENST00000358918 AP5Z1O43299 807 aa17.21■□□□□ 0.35
APP-205ENST00000358918 SYCP1Q15431 976 aa17.21■□□□□ 0.35
APP-205ENST00000358918 FIBPO43427 364 aa17.21■□□□□ 0.34
APP-205ENST00000358918 FMN2Q9NZ56 1722 aa17.2■□□□□ 0.34
APP-205ENST00000358918 NCBP1Q09161 790 aaKnown RBP17.2■□□□□ 0.34
APP-205ENST00000358918 KIAA0232Q92628 1395 aa17.2■□□□□ 0.34
APP-205ENST00000358918 SALL3Q9BXA9 1300 aa17.2■□□□□ 0.34
APP-205ENST00000358918 CHD2O14647 1828 aaKnown RBP17.2■□□□□ 0.34
APP-205ENST00000358918 DLG5Q8TDM6 1919 aa17.2■□□□□ 0.34
APP-205ENST00000358918 STX6O43752 255 aa17.2■□□□□ 0.34
APP-205ENST00000358918 IGSF3O75054 1194 aa17.2■□□□□ 0.34
APP-205ENST00000358918 AMPHP49418 695 aa17.2■□□□□ 0.34
APP-205ENST00000358918 GABPB1Q06547 395 aaPredicted RBP17.2■□□□□ 0.34
APP-205ENST00000358918 LRRCC1Q9C099 1032 aa17.2■□□□□ 0.34
APP-205ENST00000358918 SETD1BQ9UPS6 1966 aaKnown RBP17.19■□□□□ 0.34
APP-205ENST00000358918 PIK3C2AO00443 1686 aa17.19■□□□□ 0.34
APP-205ENST00000358918 C14orf37Q86TY3 774 aa17.19■□□□□ 0.34
APP-205ENST00000358918 BBXQ8WY36 941 aaPredicted RBP17.19■□□□□ 0.34
APP-205ENST00000358918 EXOC6BQ9Y2D4 811 aa17.19■□□□□ 0.34
APP-205ENST00000358918 EPB41L2O43491 1005 aaKnown RBP17.18■□□□□ 0.34
APP-205ENST00000358918 F13A1P00488 732 aa17.18■□□□□ 0.34
APP-205ENST00000358918 CCDC192P0DO97 292 aa17.18■□□□□ 0.34
APP-205ENST00000358918 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.18■□□□□ 0.34
APP-205ENST00000358918 ABTB2Q8N961 1025 aa17.18■□□□□ 0.34
APP-205ENST00000358918 PHF8Q9UPP1 1060 aa17.18■□□□□ 0.34
APP-205ENST00000358918 SBNO1A3KN83 1393 aa17.17■□□□□ 0.34
APP-205ENST00000358918 FLT4P35916 1363 aa17.17■□□□□ 0.34
APP-205ENST00000358918 SMTNL1A8MU46 457 aa17.17■□□□□ 0.34
APP-205ENST00000358918 CGNQ9P2M7 1197 aaKnown RBP17.17■□□□□ 0.34
APP-205ENST00000358918 SYT1P21579 422 aa17.17■□□□□ 0.34
APP-205ENST00000358918 PTGS1P23219 599 aa17.17■□□□□ 0.34
APP-205ENST00000358918 HSPA4P34932 840 aa17.17■□□□□ 0.34
APP-205ENST00000358918 CCT4P50991 539 aaKnown RBP17.17■□□□□ 0.34
APP-205ENST00000358918 DNAJC5Q9H3Z4 198 aa17.17■□□□□ 0.34
APP-205ENST00000358918 SMC3Q9UQE7 1217 aa17.17■□□□□ 0.34
APP-205ENST00000358918 NPHP4O75161 1426 aaPredicted RBP17.17■□□□□ 0.34
APP-205ENST00000358918 GNAI2P04899 355 aa17.16■□□□□ 0.34
APP-205ENST00000358918 CTNNA3Q9UI47 895 aa17.16■□□□□ 0.34
APP-205ENST00000358918 SLC4A10Q6U841 1118 aa17.16■□□□□ 0.34
APP-205ENST00000358918 CHL1O00533 1208 aa17.15■□□□□ 0.34
APP-205ENST00000358918 SLC4A2P04920 1241 aa17.15■□□□□ 0.34
APP-205ENST00000358918 MCM10Q7L590 875 aa17.15■□□□□ 0.34
APP-205ENST00000358918 ESCO1Q5FWF5 840 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms