RNA–Protein interactions for RNA: ENST00000358356.9

RUNX1-203, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene RUNX1, Length 2,720 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-203ENST00000358356 USP48Q86UV5 1035 aa20.69■□□□□ 0.9
RUNX1-203ENST00000358356 SSH2Q76I76 1423 aa20.69■□□□□ 0.9
RUNX1-203ENST00000358356 RGPD1P0DJD0 1748 aa20.69■□□□□ 0.9
RUNX1-203ENST00000358356 SRGAP3O43295 1099 aa20.69■□□□□ 0.9
RUNX1-203ENST00000358356 NBPF7P0C2Y1 421 aaPredicted RBP20.69■□□□□ 0.9
RUNX1-203ENST00000358356 CPA1P15085 419 aa20.69■□□□□ 0.9
RUNX1-203ENST00000358356 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.69■□□□□ 0.9
RUNX1-203ENST00000358356 SRCIN1Q9C0H9 1055 aa20.69■□□□□ 0.9
RUNX1-203ENST00000358356 TTC21AQ8NDW8 1320 aa20.69■□□□□ 0.9
RUNX1-203ENST00000358356 HOXC9P31274 260 aa20.69■□□□□ 0.9
RUNX1-203ENST00000358356 INTS4Q96HW7 963 aaKnown RBP20.69■□□□□ 0.9
RUNX1-203ENST00000358356 SOS1Q07889 1333 aaPredicted RBP20.68■□□□□ 0.9
RUNX1-203ENST00000358356 VSIG10Q8N0Z9 540 aa20.68■□□□□ 0.9
RUNX1-203ENST00000358356 RHPN1Q8TCX5 695 aa20.68■□□□□ 0.9
RUNX1-203ENST00000358356 TSPY26PQ9H489 355 aa20.68■□□□□ 0.9
RUNX1-203ENST00000358356 SPG7Q9UQ90 795 aa20.68■□□□□ 0.9
RUNX1-203ENST00000358356 HSPA4P34932 840 aa20.67■□□□□ 0.9
RUNX1-203ENST00000358356 HS1BP3Q53T59 392 aa20.67■□□□□ 0.9
RUNX1-203ENST00000358356 CWC27Q6UX04 472 aaKnown RBP20.67■□□□□ 0.9
RUNX1-203ENST00000358356 ZKSCAN5Q9Y2L8 839 aa20.67■□□□□ 0.9
RUNX1-203ENST00000358356 RASEFQ8IZ41 740 aa20.67■□□□□ 0.9
RUNX1-203ENST00000358356 SSH3Q8TE77 659 aa20.67■□□□□ 0.9
RUNX1-203ENST00000358356 PTMAP06454 111 aaKnown RBP20.66■□□□□ 0.9
RUNX1-203ENST00000358356 PI4K2BQ8TCG2 481 aa20.66■□□□□ 0.9
RUNX1-203ENST00000358356 GLIPR1L2Q4G1C9 344 aa20.65■□□□□ 0.9
RUNX1-203ENST00000358356 ABTB2Q8N961 1025 aa20.65■□□□□ 0.9
RUNX1-203ENST00000358356 DDX54Q8TDD1 881 aaKnown RBP20.65■□□□□ 0.9
RUNX1-203ENST00000358356 PKNOX2Q96KN3 472 aa20.65■□□□□ 0.9
RUNX1-203ENST00000358356 CNPY2Q9Y2B0 182 aa20.65■□□□□ 0.9
RUNX1-203ENST00000358356 SETD1BQ9UPS6 1966 aaKnown RBP20.65■□□□□ 0.9
RUNX1-203ENST00000358356 KCNQ3O43525 872 aa20.64■□□□□ 0.9
RUNX1-203ENST00000358356 HTATSF1O43719 755 aaKnown RBP20.64■□□□□ 0.9
RUNX1-203ENST00000358356 SNX14Q9Y5W7 946 aa20.64■□□□□ 0.9
RUNX1-203ENST00000358356 MAP3K5Q99683 1374 aa20.64■□□□□ 0.9
RUNX1-203ENST00000358356 ARHGAP23Q9P227 1491 aa20.64■□□□□ 0.9
RUNX1-203ENST00000358356 ZNF500O60304 480 aaPredicted RBP20.64■□□□□ 0.89
RUNX1-203ENST00000358356 LGR6Q9HBX8 967 aa20.64■□□□□ 0.89
RUNX1-203ENST00000358356 WDR33Q9C0J8 1336 aaKnown RBP20.63■□□□□ 0.89
RUNX1-203ENST00000358356 PI4KAP2A4QPH2 592 aa20.63■□□□□ 0.89
RUNX1-203ENST00000358356 AK2P54819 239 aa20.63■□□□□ 0.89
RUNX1-203ENST00000358356 PI4KAP1Q8N8J0 262 aa20.63■□□□□ 0.89
RUNX1-203ENST00000358356 CHPF2Q9P2E5 772 aa20.63■□□□□ 0.89
RUNX1-203ENST00000358356 SGSM2O43147 1006 aa20.63■□□□□ 0.89
RUNX1-203ENST00000358356 TOPAZ1Q8N9V7 1692 aa20.63■□□□□ 0.89
RUNX1-203ENST00000358356 SLIT1O75093 1534 aa20.63■□□□□ 0.89
RUNX1-203ENST00000358356 OS9Q13438 667 aaPredicted RBP20.62■□□□□ 0.89
RUNX1-203ENST00000358356 FAM13BQ9NYF5 915 aa20.62■□□□□ 0.89
RUNX1-203ENST00000358356 CCDC39Q9UFE4 941 aa20.62■□□□□ 0.89
RUNX1-203ENST00000358356 SYAP1Q96A49 352 aaPredicted RBP20.62■□□□□ 0.89
RUNX1-203ENST00000358356 DIP2AQ14689 1571 aa20.62■□□□□ 0.89
RUNX1-203ENST00000358356 ZNF830Q96NB3 372 aaPredicted RBP20.62■□□□□ 0.89
RUNX1-203ENST00000358356 RUFY3Q7L099 469 aa20.61■□□□□ 0.89
RUNX1-203ENST00000358356 NALCNQ8IZF0 1738 aa20.61■□□□□ 0.89
RUNX1-203ENST00000358356 RAD50Q92878 1312 aa20.61■□□□□ 0.89
RUNX1-203ENST00000358356 POLA2Q14181 598 aa20.61■□□□□ 0.89
RUNX1-203ENST00000358356 LSG1Q9H089 658 aaKnown RBP20.61■□□□□ 0.89
RUNX1-203ENST00000358356 RPAP1Q9BWH6 1393 aaPredicted RBP20.6■□□□□ 0.89
RUNX1-203ENST00000358356 FIBPO43427 364 aa20.6■□□□□ 0.89
RUNX1-203ENST00000358356 RAB11FIP3O75154 756 aa20.6■□□□□ 0.89
RUNX1-203ENST00000358356 KIF1BPQ96EK5 621 aa20.6■□□□□ 0.89
RUNX1-203ENST00000358356 LARGE1O95461 756 aa20.6■□□□□ 0.89
RUNX1-203ENST00000358356 CNTROBQ8N137 903 aa20.6■□□□□ 0.89
RUNX1-203ENST00000358356 ARID3AQ99856 593 aa20.6■□□□□ 0.89
RUNX1-203ENST00000358356 CASTP20810 708 aaKnown RBP20.59■□□□□ 0.89
RUNX1-203ENST00000358356 USP25Q9UHP3 1055 aa20.59■□□□□ 0.89
RUNX1-203ENST00000358356 UQCRHLA0A096LP55 91 aa20.59■□□□□ 0.89
RUNX1-203ENST00000358356 UQCRHP07919 91 aa20.59■□□□□ 0.89
RUNX1-203ENST00000358356 SYT1P21579 422 aa20.59■□□□□ 0.89
RUNX1-203ENST00000358356 AOX1Q06278 1338 aa20.58■□□□□ 0.89
RUNX1-203ENST00000358356 DNAAF4Q8WXU2 420 aa20.58■□□□□ 0.88
RUNX1-203ENST00000358356 TTC14Q96N46 770 aa20.58■□□□□ 0.88
RUNX1-203ENST00000358356 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.58■□□□□ 0.88
RUNX1-203ENST00000358356 ZSCAN22P10073 491 aaPredicted RBP20.57■□□□□ 0.88
RUNX1-203ENST00000358356 PLCB2Q00722 1185 aa20.57■□□□□ 0.88
RUNX1-203ENST00000358356 BEND3Q5T5X7 828 aa20.57■□□□□ 0.88
RUNX1-203ENST00000358356 CCDC83Q8IWF9 413 aa20.57■□□□□ 0.88
RUNX1-203ENST00000358356 PA2G4Q9UQ80 394 aaKnown RBP20.57■□□□□ 0.88
RUNX1-203ENST00000358356 STX6O43752 255 aa20.57■□□□□ 0.88
RUNX1-203ENST00000358356 HCLS1P14317 486 aaPredicted RBP20.57■□□□□ 0.88
RUNX1-203ENST00000358356 EIF4A1P60842 406 aaKnown RBP20.57■□□□□ 0.88
RUNX1-203ENST00000358356 PTH1RQ03431 593 aa20.57■□□□□ 0.88
RUNX1-203ENST00000358356 ADCK5Q3MIX3 580 aa20.57■□□□□ 0.88
RUNX1-203ENST00000358356 LIMCH1Q9UPQ0 1083 aa20.57■□□□□ 0.88
RUNX1-203ENST00000358356 SMC3Q9UQE7 1217 aa20.57■□□□□ 0.88
RUNX1-203ENST00000358356 XRN1Q8IZH2 1706 aaKnown RBP20.57■□□□□ 0.88
RUNX1-203ENST00000358356 NBPF6Q5VWK0 638 aa20.56■□□□□ 0.88
RUNX1-203ENST00000358356 NBPF4Q96M43 638 aa20.56■□□□□ 0.88
RUNX1-203ENST00000358356 DIAPH3Q9NSV4 1193 aa20.56■□□□□ 0.88
RUNX1-203ENST00000358356 PHF14O94880 888 aa20.55■□□□□ 0.88
RUNX1-203ENST00000358356 PRPF40BQ6NWY9 871 aaKnown RBP20.55■□□□□ 0.88
RUNX1-203ENST00000358356 IL17RAQ96F46 866 aa20.55■□□□□ 0.88
RUNX1-203ENST00000358356 MPRIPQ6WCQ1 1025 aa20.55■□□□□ 0.88
RUNX1-203ENST00000358356 PDCL3Q9H2J4 239 aa20.55■□□□□ 0.88
RUNX1-203ENST00000358356 ESCO1Q5FWF5 840 aa20.55■□□□□ 0.88
RUNX1-203ENST00000358356 JAKMIP1Q96N16 626 aaKnown RBP20.55■□□□□ 0.88
RUNX1-203ENST00000358356 ZMYND15Q9H091 742 aa20.55■□□□□ 0.88
RUNX1-203ENST00000358356 C17orf53Q8N3J3 647 aaPredicted RBP20.54■□□□□ 0.88
RUNX1-203ENST00000358356 FMN2Q9NZ56 1722 aa20.54■□□□□ 0.88
RUNX1-203ENST00000358356 PIK3C2AO00443 1686 aa20.54■□□□□ 0.88
RUNX1-203ENST00000358356 FAM208AQ9UK61 1670 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms